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ONTOLOGY REPORT - ANNOTATIONS


Term:dense core granule
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Accession:GO:0031045 term browser browse the term
Definition:Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted.
Synonyms:exact_synonym: dense core vesicle
 xref: NIF_Subcellular:sao772007592


show annotations for term's descendants       view all columns           Sort by:
 
dense core granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bace2 beta-secretase 2 JBrowse link 11 37,798,397 37,880,624 RGD:13782168
G Baiap3 BAI1-associated protein 3 JBrowse link 10 14,601,133 14,613,881 RGD:1624291
G Cadps calcium dependent secretion activator JBrowse link 15 15,275,489 15,690,575 RGD:11535098
G Cpe carboxypeptidase E JBrowse link 16 26,906,716 27,014,811 RGD:6483099
G Crhbp corticotropin releasing hormone binding protein JBrowse link 2 25,141,471 25,153,334 RGD:5490549
G Ecrg4 ECRG4 augurin precursor JBrowse link 9 50,526,811 50,548,056 RGD:12907558
RGD:1624291
G Myrip myosin VIIA and Rab interacting protein JBrowse link 8 128,972,307 129,139,257 RGD:8554303
G Ncs1 neuronal calcium sensor 1 JBrowse link 3 10,556,250 10,602,672 RGD:2316314
G Scg2 secretogranin II JBrowse link 9 85,237,460 85,243,024 RGD:1624291
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:2317337
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8657024
G Spx spexin hormone JBrowse link 4 176,629,597 176,635,698 RGD:1624291
RGD:12907558
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:2311146
RGD:13792537
RGD:1624291
RGD:8553894
RGD:7205660
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13792537
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:7205660
RGD:1624291
RGD:11535095
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:1624291
RGD:13792537
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:7205660
RGD:7241272
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:2311146
RGD:13792537
RGD:1624291
RGD:7205660
G Vps13a vacuolar protein sorting 13 homolog A JBrowse link 1 235,352,513 235,813,597 RGD:1624291
dense core granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam8 ADAM metallopeptidase domain 8 JBrowse link 1 212,317,510 212,332,895 RGD:1624291
extrinsic component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cadps calcium dependent secretion activator JBrowse link 15 15,275,489 15,690,575 RGD:13702263
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:14995321
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:1624291
integral component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:2317337
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:1624291
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:1624291
intrinsic component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:14995321
neuronal dense core vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:15023486
G Dmxl2 Dmx-like 2 JBrowse link 8 58,932,575 59,077,788 RGD:1624291
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:15023486
G LOC100912228 pro-neuropeptide Y-like JBrowse link 4 79,573,999 79,581,212 RGD:14995321
RGD:15023486
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:14995321
RGD:15023486
G Oprd1 opioid receptor, delta 1 JBrowse link 5 150,288,126 150,323,063 RGD:13702250
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:13702320
G Scg2 secretogranin II JBrowse link 9 85,237,460 85,243,024 RGD:1600115
RGD:1624291
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:13702244
G Stxbp5l syntaxin binding protein 5-like JBrowse link 11 66,246,624 66,566,331 RGD:1624291
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:15023486
neuronal dense core vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdyn prodynorphin JBrowse link 3 122,194,327 122,206,671 RGD:13702229
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:13702175

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19737
    cellular anatomical entity 19353
      endomembrane system 3837
        secretory granule 392
          dense core granule 32
            dense core granule lumen + 2
            dense core granule membrane + 7
            neuronal dense core vesicle + 16
Path 2
Term Annotations click to browse term
  cellular_component 19737
    cellular anatomical entity 19353
      organelle 12456
        membrane-bounded organelle 10810
          vesicle 1961
            intracellular vesicle 1816
              cytoplasmic vesicle 1811
                secretory vesicle 648
                  secretory granule 392
                    dense core granule 32
                      dense core granule lumen + 2
                      dense core granule membrane + 7
                      neuronal dense core vesicle + 16
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.