Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:heterochromatin assembly by small RNA
go back to main search page
Accession:GO:0031048 term browser browse the term
Definition:Assembly of heterochromatin, directed by small RNAs sharing sequence identity to the repressed region.
Synonyms:exact_synonym: RNA interference-like chromatin silencing;   RNA-mediated chromatin silencing;   RNA-mediated transcriptional silencing;   RNAi-directed chromatin silencing;   RNAi-like chromatin silencing;   small RNA-mediated heterochromatic silencing
 broad_synonym: RNA-mediated TGS
 related_synonym: chromatin silencing by small RNA;   heterochromatin assembly involved in chromatin silencing by small RNA;   heterochromatin formation involved in chromatin silencing by small RNA;   small RNA-mediated heterochromatin formation
 alt_id: GO:0070924
 never_in_taxon: NCBITaxon:4930 ! Saccharomyces


show annotations for term's descendants       view all columns           Sort by:
 
heterochromatin assembly by small RNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fam172a family with sequence similarity 172, member A JBrowse link 2 4,942,795 5,547,744 RGD:13792537
G Nrde2 NRDE-2, necessary for RNA interference, domain containing JBrowse link 6 124,136,949 124,177,426 RGD:13792537
G Znfx1 zinc finger, NFX1-type containing 1 JBrowse link 3 163,787,101 163,847,671 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    cellular process 18618
      cellular component organization or biogenesis 6706
        cellular component organization 6456
          chromatin organization 834
            chromatin remodeling 216
              heterochromatin assembly 52
                heterochromatin assembly by small RNA 3
                  conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA 0
                  negative regulation of heterochromatin assembly by small RNA 0
                  production of siRNA involved in chromatin silencing by small RNA 0
                  regulation of heterochromatin assembly by small RNA + 0
                  siRNA loading onto RISC involved in chromatin silencing by small RNA 0
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      cellular metabolic process 10918
        cellular aromatic compound metabolic process 5567
          nucleobase-containing compound metabolic process 5344
            nucleic acid metabolic process 4850
              RNA metabolic process 4347
                regulation of RNA metabolic process 3510
                  negative regulation of RNA metabolic process 1418
                    negative regulation of RNA biosynthetic process 1316
                      negative regulation of nucleic acid-templated transcription 1314
                        negative regulation of transcription, DNA-templated 1280
                          chromatin organization involved in negative regulation of transcription 130
                            heterochromatin assembly 52
                              heterochromatin assembly by small RNA 3
                                conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA 0
                                negative regulation of heterochromatin assembly by small RNA 0
                                production of siRNA involved in chromatin silencing by small RNA 0
                                regulation of heterochromatin assembly by small RNA + 0
                                siRNA loading onto RISC involved in chromatin silencing by small RNA 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.