Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of histone methylation
go back to main search page
Accession:GO:0031060 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the covalent addition of methyl groups to histones.


GViewer not supported for chinchilla.
show annotations for term's descendants       view all columns           Sort by:
 
regulation of histone methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctcf CCCTC-binding factor JBrowse link NW_004955484 9,041,226 9,092,924 RGD:9068941
G Mthfr methylenetetrahydrofolate reductase JBrowse link NW_004955486 2,096,379 2,112,240 RGD:9068941
negative regulation of histone H3-K27 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ezhip EZH inhibitory protein JBrowse link NW_004955543 2,532,636 2,537,978 RGD:9068941
G LOC102008188 core histone macro-H2A.1 JBrowse link NW_004955408 30,497,531 30,550,095 RGD:9068941
G Mtf2 metal response element binding transcription factor 2 JBrowse link NW_004955423 1,469,498 1,534,082 RGD:9068941
G Phf1 PHD finger protein 1 JBrowse link NW_004955437 1,943,049 1,947,027 RGD:9068941
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor JBrowse link NW_004955481 4,462,270 4,497,364 RGD:9068941
negative regulation of histone H3-K27 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ezhip EZH inhibitory protein JBrowse link NW_004955543 2,532,636 2,537,978 RGD:9068941
negative regulation of histone H3-K36 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcor BCL6 corepressor JBrowse link NW_004955566 1,412,540 1,510,339 RGD:9068941
G Fh fumarate hydratase JBrowse link NW_004955406 10,535,801 10,558,649 RGD:9068941
negative regulation of histone H3-K4 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcor BCL6 corepressor JBrowse link NW_004955566 1,412,540 1,510,339 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Gfi1b growth factor independent 1B transcriptional repressor JBrowse link NW_004955513 2,273,267 2,281,850 RGD:9068941
G Kdm1a lysine demethylase 1A JBrowse link NW_004955452 3,044,042 3,104,650 RGD:9068941
G LOC102008188 core histone macro-H2A.1 JBrowse link NW_004955408 30,497,531 30,550,095 RGD:9068941
G Prmt6 protein arginine methyltransferase 6 JBrowse link NW_004955435 10,816,787 10,818,047 RGD:9068941
G Wdr5 WD repeat domain 5 JBrowse link NW_004955513 3,198,655 3,213,754 RGD:9068941
negative regulation of histone H3-K79 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mllt6 MLLT6, PHD finger containing JBrowse link NW_004955451 13,793,396 13,813,913 RGD:9068941
negative regulation of histone H3-K9 dimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pih1d1 PIH1 domain containing 1 JBrowse link NW_004955559 1,390,823 1,395,550 RGD:9068941
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link NW_004955455 8,420,263 8,457,105 RGD:9068941
negative regulation of histone H3-K9 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Dnmt1 DNA methyltransferase 1 JBrowse link NW_004955495 1,465,529 1,505,379 RGD:9068941
G Dnmt3b DNA methyltransferase 3 beta JBrowse link NW_004955422 28,380,595 28,427,012 RGD:9068941
G Kdm1a lysine demethylase 1A JBrowse link NW_004955452 3,044,042 3,104,650 RGD:9068941
G Kdm3a lysine demethylase 3A JBrowse link NW_004955424 1,164,384 1,218,607 RGD:9068941
G Pax5 paired box 5 JBrowse link NW_004955419 29,395,631 29,577,272 RGD:9068941
negative regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kdm4a lysine demethylase 4A JBrowse link NW_004955537 3,199,394 3,255,945 RGD:9068941
G Kdm4b lysine demethylase 4B JBrowse link NW_004955495 4,019,066 4,101,577 RGD:9068941
G Kdm4c lysine demethylase 4C JBrowse link NW_004955434 10,646,524 11,000,589 RGD:9068941
G Kdm4d lysine demethylase 4D JBrowse link NW_004955605 7,585 32,650 RGD:9068941
G Pih1d1 PIH1 domain containing 1 JBrowse link NW_004955559 1,390,823 1,395,550 RGD:9068941
G Sirt1 sirtuin 1 JBrowse link NW_004955425 20,280,725 20,307,663 RGD:9068941
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link NW_004955455 8,420,263 8,457,105 RGD:9068941
negative regulation of histone methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jarid2 jumonji and AT-rich interaction domain containing 2 JBrowse link NW_004955590 383,810 512,854 RGD:9068941
positive regulation of histone H3-K27 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eed embryonic ectoderm development JBrowse link NW_004955414 6,659,144 6,685,530 RGD:9068941
G Mtf2 metal response element binding transcription factor 2 JBrowse link NW_004955423 1,469,498 1,534,082 RGD:9068941
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link NW_004955475 11,062,258 11,112,252 RGD:9068941
G Phf1 PHD finger protein 1 JBrowse link NW_004955437 1,943,049 1,947,027 RGD:9068941
G Phf19 PHD finger protein 19 JBrowse link NW_004955419 7,160,249 7,179,323 RGD:9068941
positive regulation of histone H3-K27 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asxl2 ASXL transcriptional regulator 2 JBrowse link NW_004955469 7,786,030 7,923,739 RGD:9068941
G Kpna7 karyopherin subunit alpha 7 JBrowse link NW_004955460 14,901,350 14,931,209 RGD:9068941
positive regulation of histone H3-K36 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Paxip1 PAX interacting protein 1 JBrowse link NW_004955491 8,177,422 8,219,764 RGD:9068941
positive regulation of histone H3-K36 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brd4 bromodomain containing 4 JBrowse link NW_004955495 7,959,033 7,989,216 RGD:9068941
G Nsd3 nuclear receptor binding SET domain protein 3 JBrowse link NW_004955463 13,864,294 13,985,995 RGD:9068941
positive regulation of histone H3-K4 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Auts2 activator of transcription and developmental regulator AUTS2 JBrowse link NW_004955456 10,294,525 11,417,761 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link NW_004955414 26,347,508 26,373,726 RGD:9068941
G Dnmt1 DNA methyltransferase 1 JBrowse link NW_004955495 1,465,529 1,505,379 RGD:9068941
G Dnmt3b DNA methyltransferase 3 beta JBrowse link NW_004955422 28,380,595 28,427,012 RGD:9068941
G Gcg glucagon JBrowse link NW_004955449 11,708,152 11,716,429 RGD:9068941
G Kmt2a lysine methyltransferase 2A JBrowse link NW_004955412 19,586,435 19,670,149 RGD:9068941
G Myb MYB proto-oncogene, transcription factor JBrowse link NW_004955439 1,523,516 1,560,185 RGD:9068941
G Nelfa negative elongation factor complex member A JBrowse link NW_004955514 1,162,993 1,173,278 RGD:9068941
G Nelfe negative elongation factor complex member E JBrowse link NW_004955437 467,018 473,084 RGD:9068941
G Paxip1 PAX interacting protein 1 JBrowse link NW_004955491 8,177,422 8,219,764 RGD:9068941
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component JBrowse link NW_004955416 8,237,439 8,293,802 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
G Snw1 SNW domain containing 1 JBrowse link NW_004955438 1,561,562 1,601,492 RGD:9068941
G Wdr5 WD repeat domain 5 JBrowse link NW_004955513 3,198,655 3,213,754 RGD:9068941
G Wdr61 WD repeat domain 61 JBrowse link NW_004955450 771,646 788,895 RGD:9068941
positive regulation of histone H3-K4 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kmt2e lysine methyltransferase 2E (inactive) JBrowse link NW_004955410 9,714,587 9,808,021 RGD:9068941
positive regulation of histone H3-K79 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link NW_004955414 26,347,508 26,373,726 RGD:9068941
G Wdr61 WD repeat domain 61 JBrowse link NW_004955450 771,646 788,895 RGD:9068941
positive regulation of histone H3-K9 dimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmrtc2 DMRT like family C2 JBrowse link NW_004955555 983,451 989,044 RGD:9068941
G Prdm12 PR/SET domain 12 JBrowse link NW_004955513 612,566 627,848 RGD:9068941
positive regulation of histone H3-K9 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Gfi1b growth factor independent 1B transcriptional repressor JBrowse link NW_004955513 2,273,267 2,281,850 RGD:9068941
G H1-5 H1.5 linker histone, cluster member JBrowse link NW_004955465 13,390,856 13,391,994 RGD:9068941
G Jarid2 jumonji and AT-rich interaction domain containing 2 JBrowse link NW_004955590 383,810 512,854 RGD:9068941
G Myb MYB proto-oncogene, transcription factor JBrowse link NW_004955439 1,523,516 1,560,185 RGD:9068941
G Prdm12 PR/SET domain 12 JBrowse link NW_004955513 612,566 627,848 RGD:9068941
G Rif1 replication timing regulatory factor 1 JBrowse link NW_004955440 16,977,710 17,047,809 RGD:9068941
G Sirt1 sirtuin 1 JBrowse link NW_004955425 20,280,725 20,307,663 RGD:9068941
positive regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmrtc2 DMRT like family C2 JBrowse link NW_004955555 983,451 989,044 RGD:9068941
G Lmna lamin A/C JBrowse link NW_004955545 2,290,076 2,310,982 RGD:9068941
G Mecp2 methyl-CpG binding protein 2 JBrowse link NW_004955580 674,014 737,586 RGD:9068941
G Suv39h1 suppressor of variegation 3-9 homolog 1 JBrowse link NW_004955543 258,479 271,128 RGD:9068941
positive regulation of histone H4-K20 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
positive regulation of histone methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chtop chromatin target of PRMT1 JBrowse link NW_004955545 282,342 292,428 RGD:9068941
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 JBrowse link NW_004955413 26,831,065 26,847,638 RGD:9068941
G Men1 menin 1 JBrowse link NW_004955422 20,356,491 20,363,374 RGD:9068941
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component JBrowse link NW_004955468 166,477 172,200 RGD:9068941
G Pax7 paired box 7 JBrowse link NW_004955527 474,450 573,869 RGD:9068941
G Paxbp1 PAX3 and PAX7 binding protein 1 JBrowse link NW_004955407 32,178,837 32,210,470 RGD:9068941
G Rnf20 ring finger protein 20 JBrowse link NW_004955419 24,273,714 24,299,454 RGD:9068941
G Tet1 tet methylcytosine dioxygenase 1 JBrowse link NW_004955425 20,767,406 20,857,165 RGD:9068941
G Xbp1 X-box binding protein 1 JBrowse link NW_004955455 3,037,885 3,041,827 RGD:9068941
regulation of histone H3-K27 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata3 GATA binding protein 3 JBrowse link NW_004955421 24,448,446 24,477,885 RGD:9068941
regulation of histone H3-K36 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nsd1 nuclear receptor binding SET domain protein 1 JBrowse link NW_004955408 29,416,393 29,547,444 RGD:9068941
regulation of histone H3-K36 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Iws1 interacts with SUPT6H, CTD assembly factor 1 JBrowse link NW_004955459 3,021,320 3,063,363 RGD:9068941
regulation of histone H3-K4 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctcfl CCCTC-binding factor like JBrowse link NW_004955445 1,944,845 1,969,502 RGD:9068941
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link NW_004955437 396,736 411,144 RGD:9068941
G Gata3 GATA binding protein 3 JBrowse link NW_004955421 24,448,446 24,477,885 RGD:9068941
G Kmt2a lysine methyltransferase 2A JBrowse link NW_004955412 19,586,435 19,670,149 RGD:9068941
G Kmt2b lysine methyltransferase 2B JBrowse link NW_004955468 2,813,183 2,834,326 RGD:9068941
G Pih1d1 PIH1 domain containing 1 JBrowse link NW_004955559 1,390,823 1,395,550 RGD:9068941
G Znf335 zinc finger protein 335 JBrowse link NW_004955445 11,334,742 11,354,584 RGD:9068941
regulation of histone H3-K9 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link NW_004955437 396,736 411,144 RGD:9068941
G Setd7 SET domain containing 7, histone lysine methyltransferase JBrowse link NW_004955428 4,131,431 4,178,250 RGD:9068941
regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX chromatin remodeler JBrowse link NW_004955557 947,368 1,252,701 RGD:9068941
G Znf274 zinc finger protein 274 JBrowse link NW_004955584 922,807 943,352 RGD:9068941
regulation of histone H4-K20 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ttll12 tubulin tyrosine ligase like 12 JBrowse link NW_004955413 28,316,936 28,333,423 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11826
    metabolic process 7570
      methylation 259
        macromolecule methylation 249
          protein methylation 165
            histone methylation 131
              regulation of histone methylation 74
                negative regulation of histone methylation + 25
                positive regulation of histone methylation + 45
                regulation of histone H3-K27 methylation + 11
                regulation of histone H3-K36 methylation + 7
                regulation of histone H3-K4 methylation + 28
                regulation of histone H3-K79 methylation + 3
                regulation of histone H3-K9 methylation + 27
                regulation of histone H4-K20 methylation + 2
Path 2
Term Annotations click to browse term
  biological_process 11826
    metabolic process 7570
      organic substance metabolic process 7273
        macromolecule metabolic process 6317
          protein metabolic process 3830
            protein modification process 2851
              cellular protein modification process 2851
                protein alkylation 165
                  protein methylation 165
                    histone methylation 131
                      regulation of histone methylation 74
                        negative regulation of histone methylation + 25
                        positive regulation of histone methylation + 45
                        regulation of histone H3-K27 methylation + 11
                        regulation of histone H3-K36 methylation + 7
                        regulation of histone H3-K4 methylation + 28
                        regulation of histone H3-K79 methylation + 3
                        regulation of histone H3-K9 methylation + 27
                        regulation of histone H4-K20 methylation + 2
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.