Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of histone methylation
go back to main search page
Accession:GO:0031060 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the covalent addition of methyl groups to histones.


show annotations for term's descendants       view all columns           Sort by:
 
regulation of histone methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTCF CCCTC-binding factor JBrowse link 5 81,808,512 81,863,811 RGD:13508589
G LOC106559800 developmental pluripotency-associated protein 2-like JBrowse link 16 18,551,215 18,552,780 RGD:9068941
G MTHFR methylenetetrahydrofolate reductase JBrowse link 2 84,445,526 84,457,435 RGD:9068941
G PHF1 PHD finger protein 1 JBrowse link 12 2,822,372 2,827,406 RGD:13508589
negative regulation of histone H3-K27 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MACROH2A1 macroH2A.1 histone JBrowse link 11 23,369,957 23,448,235 RGD:13508589
G MTF2 metal response element binding transcription factor 2 JBrowse link 6 55,950,814 56,010,935 RGD:13508589
G PHF1 PHD finger protein 1 JBrowse link 12 2,822,372 2,827,406 RGD:13508589
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor JBrowse link 9 42,859,154 42,896,044 RGD:13508589
negative regulation of histone H3-K36 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCOR BCL6 corepressor JBrowse link X 34,621,314 34,735,502 RGD:13508589
G FH fumarate hydratase JBrowse link 7 32,900,250 32,927,436 RGD:9068941
negative regulation of histone H3-K4 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCOR BCL6 corepressor JBrowse link X 34,621,314 34,735,502 RGD:13508589
G BRCA1 BRCA1 DNA repair associated JBrowse link 9 19,958,941 20,025,494 RGD:9068941
G GFI1B growth factor independent 1B transcriptional repressor JBrowse link 9 51,380,697 51,394,679 RGD:9068941
G KDM1A lysine demethylase 1A JBrowse link 2 76,313,742 76,375,716 RGD:9068941
G MACROH2A1 macroH2A.1 histone JBrowse link 11 23,369,957 23,448,235 RGD:13508589
G PRMT6 protein arginine methyltransferase 6 JBrowse link 6 44,475,829 44,478,215 RGD:13508589
G WDR5 WD repeat domain 5 JBrowse link 9 50,352,600 50,371,224 RGD:9068941
negative regulation of histone H3-K79 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MLLT6 MLLT6, PHD finger containing JBrowse link 9 23,504,750 23,526,747 RGD:13508589
negative regulation of histone H3-K9 dimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PIH1D1 PIH1 domain containing 1 JBrowse link 1 107,045,466 107,051,281 RGD:9068941
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 26 28,692,610 28,728,778 RGD:9068941
negative regulation of histone H3-K9 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA1 BRCA1 DNA repair associated JBrowse link 9 19,958,941 20,025,494 RGD:9068941
G DNMT1 DNA methyltransferase 1 JBrowse link 20 50,872,213 50,928,352 RGD:13508589
G DNMT3B DNA methyltransferase 3 beta JBrowse link 24 22,096,386 22,123,378 RGD:13508589
G KDM1A lysine demethylase 1A JBrowse link 2 76,313,742 76,375,716 RGD:9068941
G KDM3A lysine demethylase 3A JBrowse link 17 38,690,962 38,744,507 RGD:13508589
G PAX5 paired box 5 JBrowse link 11 53,194,905 53,390,204 RGD:9068941
negative regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KDM4A lysine demethylase 4A JBrowse link 15 16,521,760 16,570,965 RGD:13508589
G KDM4B lysine demethylase 4B JBrowse link 20 54,713,900 54,843,991 RGD:9068941
G KDM4C lysine demethylase 4C JBrowse link 11 27,662,764 28,101,432 RGD:9068941
G KDM4D lysine demethylase 4D JBrowse link 21 6,002,292 6,037,344 RGD:9068941
G PIH1D1 PIH1 domain containing 1 JBrowse link 1 107,045,466 107,051,281 RGD:9068941
G SIRT1 sirtuin 1 JBrowse link 4 19,188,616 19,220,031 RGD:9068941
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 26 28,692,610 28,728,778 RGD:9068941
negative regulation of histone methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G JARID2 jumonji and AT-rich interaction domain containing 2 JBrowse link 35 14,476,656 14,737,535 RGD:13508589
positive regulation of histone H3-K27 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EED embryonic ectoderm development JBrowse link 21 13,260,062 13,289,511 RGD:13508589
G MTF2 metal response element binding transcription factor 2 JBrowse link 6 55,950,814 56,010,935 RGD:13508589
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 55,821,227 55,857,597 RGD:13508589
G PHF1 PHD finger protein 1 JBrowse link 12 2,822,372 2,827,406 RGD:13508589
G PHF19 PHD finger protein 19 JBrowse link 11 73,895,104 73,911,030 RGD:9068941
positive regulation of histone H3-K27 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ASXL2 ASXL transcriptional regulator 2 JBrowse link 17 19,914,026 20,065,141 RGD:9068941
G KPNA7 karyopherin subunit alpha 7 JBrowse link 6 10,344,320 10,363,755 RGD:9068941
G ZNF304 zinc finger protein 304 JBrowse link 1 100,739,792 100,748,656 RGD:9068941
positive regulation of histone H3-K36 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PAXIP1 PAX interacting protein 1 JBrowse link 16 18,066,289 18,116,007 RGD:13508589
positive regulation of histone H3-K36 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRD4 bromodomain containing 4 JBrowse link 20 46,844,795 46,927,620 RGD:13508589
G NSD3 nuclear receptor binding SET domain protein 3 JBrowse link 16 27,106,348 27,225,049 RGD:13508589
positive regulation of histone H3-K4 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AUTS2 activator of transcription and developmental regulator AUTS2 JBrowse link 6 2,747,288 3,875,774 RGD:9068941
G BRCA1 BRCA1 DNA repair associated JBrowse link 9 19,958,941 20,025,494 RGD:9068941
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 21 33,915,804 33,949,597 RGD:13508589
G DNMT1 DNA methyltransferase 1 JBrowse link 20 50,872,213 50,928,352 RGD:13508589
G DNMT3B DNA methyltransferase 3 beta JBrowse link 24 22,096,386 22,123,378 RGD:13508589
G GCG glucagon JBrowse link 36 7,544,637 7,554,171 RGD:13508589
G KMT2A lysine methyltransferase 2A JBrowse link 5 15,212,559 15,302,825 RGD:13508589
G MYB MYB proto-oncogene, transcription factor JBrowse link 1 27,908,309 27,991,984 RGD:9068941
G NELFA negative elongation factor complex member A JBrowse link 3 62,147,948 62,164,039 RGD:9068941
G NELFE negative elongation factor complex member E JBrowse link 12 1,406,411 1,412,387 RGD:9068941
G PAXIP1 PAX interacting protein 1 JBrowse link 16 18,066,289 18,116,007 RGD:13508589
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component JBrowse link 30 8,468,001 8,524,712 RGD:13508589
G SMAD4 SMAD family member 4 JBrowse link 1 23,875,989 23,930,027 RGD:13508589
G SNW1 SNW domain containing 1 JBrowse link 8 50,478,924 50,512,360 RGD:9068941
G WDR5 WD repeat domain 5 JBrowse link 9 50,352,600 50,371,224 RGD:9068941
G WDR61 WD repeat domain 61 JBrowse link 3 58,403,146 58,418,782 RGD:9068941
positive regulation of histone H3-K4 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KMT2E lysine methyltransferase 2E (inactive) JBrowse link 18 15,240,631 15,332,850 RGD:9068941
positive regulation of histone H3-K79 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 21 33,915,804 33,949,597 RGD:13508589
G WDR61 WD repeat domain 61 JBrowse link 3 58,403,146 58,418,782 RGD:9068941
positive regulation of histone H3-K9 dimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DMRTC2 DMRT like family C2 JBrowse link 1 112,434,046 112,439,712 RGD:13508589
G PRDM12 PR/SET domain 12 JBrowse link 9 53,284,455 53,300,951 RGD:13508589
positive regulation of histone H3-K9 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA1 BRCA1 DNA repair associated JBrowse link 9 19,958,941 20,025,494 RGD:9068941
G GFI1B growth factor independent 1B transcriptional repressor JBrowse link 9 51,380,697 51,394,679 RGD:9068941
G H1-5 H1.5 linker histone, cluster member JBrowse link 35 25,045,883 25,046,775 RGD:9068941
G JARID2 jumonji and AT-rich interaction domain containing 2 JBrowse link 35 14,476,656 14,737,535 RGD:13508589
G MYB MYB proto-oncogene, transcription factor JBrowse link 1 27,908,309 27,991,984 RGD:9068941
G PRDM12 PR/SET domain 12 JBrowse link 9 53,284,455 53,300,951 RGD:9068941
G RIF1 replication timing regulatory factor 1 JBrowse link 19 52,661,278 52,711,969 RGD:13508589
G SIRT1 sirtuin 1 JBrowse link 4 19,188,616 19,220,031 RGD:9068941
positive regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DMRTC2 DMRT like family C2 JBrowse link 1 112,434,046 112,439,712 RGD:13508589
G LMNA lamin A/C JBrowse link 7 41,702,491 41,719,870 RGD:13508589
G MECP2 methyl-CpG binding protein 2 JBrowse link X 121,866,721 121,876,088 RGD:13508589
G SUV39H1 suppressor of variegation 3-9 homolog 1 JBrowse link X 41,894,623 41,907,854 RGD:9068941
G ZNF304 zinc finger protein 304 JBrowse link 1 100,739,792 100,748,656 RGD:9068941
positive regulation of histone H4-K20 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA1 BRCA1 DNA repair associated JBrowse link 9 19,958,941 20,025,494 RGD:9068941
positive regulation of histone methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHTOP chromatin target of PRMT1 JBrowse link 7 43,418,902 43,428,012 RGD:13508589
G L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 JBrowse link 10 24,000,008 24,021,883 RGD:9068941
G MEN1 menin 1 JBrowse link 18 52,346,747 52,352,884 RGD:9068941
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component JBrowse link 1 113,828,219 113,832,747 RGD:9068941
G PAX7 paired box 7 JBrowse link 2 79,813,835 79,952,490 RGD:13508589
G PAXBP1 PAX3 and PAX7 binding protein 1 JBrowse link 31 27,405,547 27,439,839 RGD:9068941
G RNF20 ring finger protein 20 JBrowse link 11 58,239,245 58,266,637 RGD:13508589
G TET1 tet methylcytosine dioxygenase 1 JBrowse link 4 19,759,661 19,898,345 RGD:13508589
G XBP1 X-box binding protein 1 JBrowse link 26 22,162,675 22,168,149 RGD:9068941
regulation of histone H3-K27 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GATA3 GATA binding protein 3 JBrowse link 2 28,068,143 28,098,445 RGD:13508589
G HOTAIR HOX transcript antisense RNA JBrowse link 27 1,296,506 1,300,023 RGD:9068941
regulation of histone H3-K36 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NSD1 nuclear receptor binding SET domain protein 1 JBrowse link 4 36,058,351 36,214,254 RGD:13508589
regulation of histone H3-K36 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IWS1 interacts with SUPT6H, CTD assembly factor 1 JBrowse link 19 23,081,625 23,122,618 RGD:13508589
regulation of histone H3-K4 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTCFL CCCTC-binding factor like JBrowse link 24 42,477,029 42,507,217 RGD:13508589
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 21 33,915,804 33,949,597 RGD:13508589
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 12 1,341,202 1,354,602 RGD:9068941
G GATA3 GATA binding protein 3 JBrowse link 2 28,068,143 28,098,445 RGD:13508589
G GFI1 growth factor independent 1 transcriptional repressor JBrowse link 6 56,473,032 56,484,422 RGD:13508589
G HOTAIR HOX transcript antisense RNA JBrowse link 27 1,296,506 1,300,023 RGD:9068941
G KMT2A lysine methyltransferase 2A JBrowse link 5 15,212,559 15,302,825 RGD:9068941
G KMT2B lysine methyltransferase 2B JBrowse link 1 116,894,024 116,913,464 RGD:9068941
G PIH1D1 PIH1 domain containing 1 JBrowse link 1 107,045,466 107,051,281 RGD:9068941
G PYGO2 pygopus family PHD finger 2 JBrowse link 7 42,509,760 42,513,744 RGD:13508589
G ZNF335 zinc finger protein 335 JBrowse link 24 33,226,636 33,246,496 RGD:13508589
regulation of histone H3-K9 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 12 1,341,202 1,354,602 RGD:9068941
G SETD7 SET domain containing 7, histone lysine methyltransferase JBrowse link 19 3,186,620 3,229,305 RGD:9068941
regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATRX ATRX chromatin remodeler JBrowse link X 59,772,067 60,107,016 RGD:13508589
G ZNF274 zinc finger protein 274 JBrowse link 1 99,696,295 99,719,559 RGD:13508589
regulation of histone H4-K20 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TTLL12 tubulin tyrosine ligase like 12 JBrowse link 10 22,367,590 22,385,167 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16041
    metabolic process 10496
      methylation 327
        macromolecule methylation 309
          protein methylation 188
            histone methylation 145
              regulation of histone methylation 78
                negative regulation of histone methylation + 24
                positive regulation of histone methylation + 46
                regulation of histone H3-K27 methylation + 12
                regulation of histone H3-K36 methylation + 7
                regulation of histone H3-K4 methylation + 31
                regulation of histone H3-K79 methylation + 3
                regulation of histone H3-K9 methylation + 28
                regulation of histone H4-K20 methylation + 2
Path 2
Term Annotations click to browse term
  biological_process 16041
    metabolic process 10496
      organic substance metabolic process 9993
        macromolecule metabolic process 8683
          protein metabolic process 5317
            protein modification process 3687
              cellular protein modification process 3687
                protein alkylation 188
                  protein methylation 188
                    histone methylation 145
                      regulation of histone methylation 78
                        negative regulation of histone methylation + 24
                        positive regulation of histone methylation + 46
                        regulation of histone H3-K27 methylation + 12
                        regulation of histone H3-K36 methylation + 7
                        regulation of histone H3-K4 methylation + 31
                        regulation of histone H3-K79 methylation + 3
                        regulation of histone H3-K9 methylation + 28
                        regulation of histone H4-K20 methylation + 2
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.