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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of histone deacetylation
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Accession:GO:0031063 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the removal of acetyl groups from histones.


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regulation of histone deacetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:1600115
G Tada2a transcriptional adaptor 2A JBrowse link 10 71,393,701 71,441,435 RGD:1624291
G Tada3 transcriptional adaptor 3 JBrowse link 4 145,318,417 145,330,291 RGD:1624291
G Znhit1 zinc finger, HIT-type containing 1 JBrowse link 12 22,726,643 22,732,917 RGD:1624291
RGD:13792537
negative regulation of histone deacetylase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kdm5a lysine demethylase 5A JBrowse link 4 152,892,388 152,972,196 RGD:1624291
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
negative regulation of histone deacetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxp3 forkhead box P3 JBrowse link X 15,753,175 15,768,648 RGD:1624291
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like JBrowse link 1 169,720,247 169,721,788 RGD:1624291
G Prmt6 protein arginine methyltransferase 6 JBrowse link 2 213,173,403 213,180,721 RGD:1624291
G Ski SKI proto-oncogene JBrowse link 5 172,556,196 172,623,878 RGD:1600115
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
G Ucn urocortin JBrowse link 6 26,602,144 26,602,974 RGD:1600115
positive regulation of histone deacetylase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:1624291
G Prkd1 protein kinase D1 JBrowse link 6 71,035,017 71,349,531 RGD:1624291
G Prkd2 protein kinase D2 JBrowse link 1 78,767,911 78,796,223 RGD:1624291
G RGD735065 similar to GI:13385412-like protein splice form I JBrowse link 20 6,869,870 6,910,022 RGD:1624291
RGD:1600115
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1624291
positive regulation of histone deacetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap8 A-kinase anchoring protein 8 JBrowse link 7 14,323,298 14,339,953 RGD:1624291
G Akap8l A-kinase anchoring protein 8 like JBrowse link 7 14,340,168 14,369,835 RGD:1624291
G Bcl6 BCL6, transcription repressor JBrowse link 11 80,255,790 80,279,075 RGD:1624291
G Ctbp1 C-terminal binding protein 1 JBrowse link 14 82,762,109 82,789,350 RGD:1624291
RGD:1600115
G Ing2 inhibitor of growth family, member 2 JBrowse link 16 47,714,756 47,725,836 RGD:1624291
G Jdp2 Jun dimerization protein 2 JBrowse link 6 109,464,910 109,505,591 RGD:1624291
G Lpin1 lipin 1 JBrowse link 6 41,796,214 41,905,149 RGD:1624291
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:1624291
G Nipbl NIPBL, cohesin loading factor JBrowse link 2 57,508,830 57,676,197 RGD:1624291
G Pml PML nuclear body scaffold JBrowse link 8 63,002,515 63,034,310 RGD:1624291
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 JBrowse link 5 16,904,926 16,930,111 RGD:1624291
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
G Zbtb7b zinc finger and BTB domain containing 7B JBrowse link 2 188,704,989 188,719,674 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19676
    cellular process 18449
      regulation of cellular process 12405
        regulation of cellular metabolic process 6113
          regulation of cellular protein metabolic process 2774
            regulation of protein modification process 1941
              regulation of protein deacetylation 55
                regulation of histone deacetylation 32
                  negative regulation of histone deacetylation + 7
                  positive regulation of histone deacetylation + 21
                  regulation of histone deacetylase activity + 8
                  regulation of histone deacetylation at centromere + 0
Path 2
Term Annotations click to browse term
  biological_process 19676
    metabolic process 11952
      organic substance metabolic process 11358
        macromolecule metabolic process 9814
          protein metabolic process 6075
            protein modification process 3895
              cellular protein modification process 3895
                protein deacylation 112
                  protein deacetylation 101
                    histone deacetylation 80
                      regulation of histone deacetylation 32
                        negative regulation of histone deacetylation + 7
                        positive regulation of histone deacetylation + 21
                        regulation of histone deacetylase activity + 8
                        regulation of histone deacetylation at centromere + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.