Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of histone deacetylation
go back to main search page
Accession:GO:0031065 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.
Synonyms:exact_synonym: up regulation of histone deacetylation;   upregulation of histone deacetylation
 narrow_synonym: activation of histone deacetylation;   stimulation of histone deacetylation


show annotations for term's descendants           Sort by:
 
positive regulation of histone deacetylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8 A-kinase anchoring protein 8 ISO (PMID:16980585) UniProtKB PMID:16980585 NCBI chr19:14,888,201...14,912,739
Ensembl chr19:15,872,536...15,897,661
JBrowse link
G AKAP8L A-kinase anchoring protein 8 like ISO (PMID:16980585) UniProtKB PMID:16980585 NCBI chr19:14,912,960...14,950,479
Ensembl chr19:15,897,969...15,936,486
JBrowse link
G BCL6 BCL6 transcription repressor ISO (MGI:MGI:5493185|PMID:23160044) MGI PMID:23160044 MGI:MGI:5493185 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124
JBrowse link
G CTBP1 C-terminal binding protein 1 ISO (PMID:21102443) BHF-UCL PMID:21102443 NCBI chr 4:1,354,806...1,393,244
Ensembl chr 4:1,238,984...1,266,822
JBrowse link
G ING2 inhibitor of growth family member 2 ISO (MGI:MGI:4867787|PMID:21124965) BHF-UCL PMID:21124965 MGI:MGI:4867787 NCBI chr 4:175,683,040...175,689,646
Ensembl chr 4:187,909,495...187,915,674
JBrowse link
G JDP2 Jun dimerization protein 2 ISO (MGI:MGI:3807603|PMID:17464331) MGI PMID:17464331 MGI:MGI:3807603 NCBI chr14:55,982,051...56,024,816
Ensembl chr14:74,828,944...74,870,087
JBrowse link
G LPIN1 lipin 1 ISO (MGI:MGI:4819323|PMID:20385772) MGI PMID:20385772 MGI:MGI:4819323 NCBI chr2A:11,664,727...11,815,497
Ensembl chr2A:11,857,961...11,961,551
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:MGI:3821398 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NIPBL NIPBL cohesin loading factor ISO (PMID:18854353) BHF-UCL PMID:18854353 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184
JBrowse link
G PML PML nuclear body scaffold ISO (PMID:11259576) UniProtKB PMID:11259576 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G SDR16C5 short chain dehydrogenase/reductase family 16C member 5 ISO (PMID:16691198) CAFA PMID:16691198 NCBI chr 8:52,746,371...52,769,269
Ensembl chr 8:50,113,413...50,137,717
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 ISO (MGI:MGI:3760208|PMID:17636037) MGI PMID:17636037 MGI:MGI:3760208 NCBI chr17:33,458,196...33,484,643
Ensembl chr17:38,405,794...38,432,045
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO (MGI:MGI:3528807|PMID:15657445), (MGI:MGI:3584056|PMID:15990875) MGI PMID:15657445, PMID:15990875 MGI:MGI:3528807, MGI:MGI:3584056 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TP53 tumor protein p53 ISO (MGI:MGI:3528807|PMID:15657445) MGI PMID:15657445 MGI:MGI:3528807 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B ISO (MGI:MGI:5446998|PMID:22730529) UniProtKB PMID:22730529 MGI:MGI:5446998 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729
JBrowse link
positive regulation of histone deacetylase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C6H6orf89 chromosome 6 C6orf89 homolog ISO (PMID:23460338) UniProtKB PMID:23460338 NCBI chr 6:36,447,781...36,490,836
Ensembl chr 6:37,643,402...37,680,471
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (MGI:MGI:5902654|PMID:27798112) MGI PMID:27798112 MGI:MGI:5902654 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G PINK1 PTEN induced kinase 1 ISO (MGI:MGI:5617128|PMID:25305081) MGI PMID:25305081 MGI:MGI:5617128 NCBI chr 1:19,583,330...19,601,248
Ensembl chr 1:20,627,693...20,645,560
JBrowse link
G PRKD1 protein kinase D1 ISO (PMID:20497126) BHF-UCL PMID:20497126 NCBI chr14:10,353,284...10,707,841
Ensembl chr14:28,496,282...28,650,030
JBrowse link
G PRKD2 protein kinase D2 ISO (PMID:20497126) BHF-UCL PMID:20497126 NCBI chr19:43,666,591...43,710,858
Ensembl chr19:52,195,303...52,237,731
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (PMID:20497126) BHF-UCL PMID:20497126 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12524
    metabolic process 7962
      positive regulation of metabolic process 3470
        positive regulation of cellular metabolic process 3022
          positive regulation of cellular protein metabolic process 1468
            positive regulation of protein modification process 1143
              positive regulation of histone modification 106
                positive regulation of histone deacetylation 21
                  positive regulation of histone deacetylase activity 6
                  positive regulation of histone deacetylation at centromere 0
Path 2
Term Annotations click to browse term
  biological_process 12524
    cellular process 11624
      cellular component organization or biogenesis 4978
        cellular component organization 4898
          organelle organization 3021
            chromosome organization 877
              chromatin organization 556
                covalent chromatin modification 417
                  histone modification 403
                    regulation of histone modification 165
                      positive regulation of histone modification 106
                        positive regulation of histone deacetylation 21
                          positive regulation of histone deacetylase activity 6
                          positive regulation of histone deacetylation at centromere 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.