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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of histone deacetylation
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Accession:GO:0031065 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.
Synonyms:exact_synonym: up regulation of histone deacetylation;   upregulation of histone deacetylation
 narrow_synonym: activation of histone deacetylation;   stimulation of histone deacetylation


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positive regulation of histone deacetylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 ISO (PMID:16980585) UniProtKB PMID:16980585 NCBI chrNW_004955495:7,874,655...7,893,209 JBrowse link
G Akap8l A-kinase anchoring protein 8 like ISO (PMID:16980585) UniProtKB PMID:16980585 NCBI chrNW_004955495:7,839,339...7,874,432 JBrowse link
G Bcl6 BCL6 transcription repressor ISO (MGI:MGI:5493185|PMID:23160044) MGI PMID:23160044 MGI:MGI:5493185 NCBI chrNW_004955420:19,998,960...20,021,200 JBrowse link
G Ctbp1 C-terminal binding protein 1 ISO (PMID:21102443) BHF-UCL PMID:21102443 NCBI chrNW_004955514:630,168...652,817 JBrowse link
G Ing2 inhibitor of growth family member 2 ISO (MGI:MGI:4867787|PMID:21124965) BHF-UCL PMID:21124965 MGI:MGI:4867787 NCBI chrNW_004955403:25,325,600...25,331,175 JBrowse link
G Jdp2 Jun dimerization protein 2 ISO (MGI:MGI:3807603|PMID:17464331) MGI PMID:17464331 MGI:MGI:3807603 NCBI chrNW_004955523:140,546...169,769 JBrowse link
G Lpin1 lipin 1 ISO (MGI:MGI:4819323|PMID:20385772) MGI PMID:20385772 MGI:MGI:4819323 NCBI chrNW_004955487:6,139,188...6,207,316 JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:MGI:3821398 NCBI chrNW_004955467:1,408,292...1,568,539 JBrowse link
G Nipbl NIPBL cohesin loading factor ISO (PMID:18854353) BHF-UCL PMID:18854353 NCBI chrNW_004955426:21,666,958...21,841,515 JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:11259576) UniProtKB PMID:11259576 NCBI chrNW_004955450:3,654,854...3,692,057 JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C member 5 ISO (PMID:16691198) CAFA PMID:16691198 NCBI chrNW_004955454:15,339,353...15,349,180 JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO (MGI:MGI:3760208|PMID:17636037) MGI PMID:17636037 MGI:MGI:3760208 NCBI chrNW_004955577:171,425...183,669 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (MGI:MGI:3528807|PMID:15657445), (MGI:MGI:3584056|PMID:15990875) MGI PMID:15657445, PMID:15990875 MGI:MGI:3528807, MGI:MGI:3584056 NCBI chrNW_004955555:274,405...288,441 JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:3528807|PMID:15657445) MGI PMID:15657445 MGI:MGI:3528807 NCBI chrNW_004955467:9,241,391...9,256,716 JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B ISO (MGI:MGI:5446998|PMID:22730529) UniProtKB PMID:22730529 MGI:MGI:5446998 NCBI chrNW_004955545:1,504,656...1,519,954 JBrowse link
positive regulation of histone deacetylase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102023844 chromosome unknown open reading frame, human C6orf89 ISO (PMID:23460338) UniProtKB PMID:23460338 NCBI chrNW_004955437:6,087,297...6,124,219 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (MGI:MGI:5902654|PMID:27798112) MGI PMID:27798112 MGI:MGI:5902654 NCBI chrNW_004955505:84,324...216,923 JBrowse link
G Pink1 PTEN induced kinase 1 ISO (MGI:MGI:5617128|PMID:25305081) MGI PMID:25305081 MGI:MGI:5617128 NCBI chrNW_004955452:1,171,115...1,186,338 JBrowse link
G Prkd1 protein kinase D1 ISO (PMID:20497126) BHF-UCL PMID:20497126 NCBI chrNW_004955409:30,554,095...30,860,588 JBrowse link
G Prkd2 protein kinase D2 ISO (PMID:20497126) BHF-UCL PMID:20497126 NCBI chrNW_004955574:723,933...750,794 JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:20497126) BHF-UCL PMID:20497126 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11860
    metabolic process 7594
      positive regulation of metabolic process 3329
        positive regulation of cellular metabolic process 2920
          positive regulation of cellular protein metabolic process 1409
            positive regulation of protein modification process 1102
              positive regulation of histone modification 102
                positive regulation of histone deacetylation 21
                  positive regulation of histone deacetylase activity 6
                  positive regulation of histone deacetylation at centromere 0
Path 2
Term Annotations click to browse term
  biological_process 11860
    cellular process 11055
      cellular component organization or biogenesis 4837
        cellular component organization 4757
          organelle organization 2937
            chromosome organization 843
              chromatin organization 528
                covalent chromatin modification 400
                  histone modification 387
                    regulation of histone modification 159
                      positive regulation of histone modification 102
                        positive regulation of histone deacetylation 21
                          positive regulation of histone deacetylase activity 6
                          positive regulation of histone deacetylation at centromere 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.