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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of histone deacetylation
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Accession:GO:0031065 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.
Synonyms:exact_synonym: up regulation of histone deacetylation;   upregulation of histone deacetylation
 narrow_synonym: activation of histone deacetylation;   stimulation of histone deacetylation


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positive regulation of histone deacetylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8 A-kinase anchoring protein 8 IMP (PMID:16980585) UniProtKB PMID:16980585 NCBI chr19:15,353,385...15,379,787
Ensembl chr19:15,353,385...15,379,798
JBrowse link
G AKAP8L A-kinase anchoring protein 8 like IMP (PMID:16980585) UniProtKB PMID:16980585 NCBI chr19:15,380,050...15,418,988
Ensembl chr19:15,380,050...15,419,141
JBrowse link
G BCL6 BCL6 transcription repressor IEA Ensembl GO_REF:0000107 NCBI chr 3:187,721,377...187,745,472
Ensembl chr 3:187,721,377...187,745,725
JBrowse link
G CTBP1 C-terminal binding protein 1 IMP (PMID:21102443) BHF-UCL PMID:21102443 NCBI chr 4:1,211,444...1,250,355
Ensembl chr 4:1,211,445...1,249,953
Ensembl chr 4:1,211,445...1,249,953
JBrowse link
G ING2 inhibitor of growth family member 2 ISS (PMID:21124965) BHF-UCL PMID:21124965 NCBI chr 4:183,505,058...183,512,429
Ensembl chr 4:183,505,058...183,512,429
JBrowse link
G JDP2 Jun dimerization protein 2 IEA Ensembl GO_REF:0000107 NCBI chr14:75,426,692...75,474,107
Ensembl chr14:75,427,716...75,474,111
JBrowse link
G LPIN1 lipin 1 ISO (MGI:MGI:4819323|PMID:20385772) MGI PMID:20385772 MGI:MGI:4819323 NCBI chr 2:11,677,544...11,827,409
Ensembl chr 2:11,677,595...11,827,409
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:MGI:3821398 NCBI chr17:16,029,157...16,216,475
Ensembl chr17:16,029,157...16,218,185
JBrowse link
G NIPBL NIPBL cohesin loading factor IDA (PMID:18854353) BHF-UCL PMID:18854353 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413
JBrowse link
G PML PML nuclear body scaffold IDA (PMID:11259576) UniProtKB PMID:11259576 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G SDR16C5 short chain dehydrogenase/reductase family 16C member 5 IDA (PMID:16691198) CAFA PMID:16691198 NCBI chr 8:56,300,005...56,320,560
Ensembl chr 8:56,300,010...56,320,776
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr17:17,811,334...17,837,017
Ensembl chr17:17,810,399...17,837,011
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TP53 tumor protein p53 IEA Ensembl GO_REF:0000107 NCBI chr17:7,668,402...7,687,550
Ensembl chr17:7,661,779...7,687,538
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B ISS UniProtKB GO_REF:0000024 NCBI chr 1:155,002,628...155,018,523
Ensembl chr 1:155,002,630...155,018,522
JBrowse link
positive regulation of histone deacetylase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C6orf89 chromosome 6 open reading frame 89 IDA
IBA
(PMID:23460338)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:23460338 NCBI chr 6:36,834,886...36,928,964
Ensembl chr 6:36,871,870...36,928,964
JBrowse link
G LRRK2 leucine rich repeat kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G PINK1 PTEN induced kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:20,633,458...20,651,511
Ensembl chr 1:20,633,458...20,651,511
JBrowse link
G PRKD1 protein kinase D1 IGI (PMID:20497126) BHF-UCL PMID:20497126 NCBI chr14:29,576,479...29,927,847
Ensembl chr14:29,576,479...30,191,898
JBrowse link
G PRKD2 protein kinase D2 IGI (PMID:20497126) BHF-UCL PMID:20497126 NCBI chr19:46,674,316...46,717,114
Ensembl chr19:46,674,275...46,717,127
JBrowse link
G VEGFA vascular endothelial growth factor A IDA (PMID:20497126) BHF-UCL PMID:20497126 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18626
    metabolic process 12276
      positive regulation of metabolic process 4235
        positive regulation of cellular metabolic process 3705
          positive regulation of cellular protein metabolic process 1785
            positive regulation of protein modification process 1383
              positive regulation of histone modification 111
                positive regulation of histone deacetylation 21
                  positive regulation of histone deacetylase activity 6
                  positive regulation of histone deacetylation at centromere 0
Path 2
Term Annotations click to browse term
  biological_process 18626
    cellular process 17648
      cellular component organization or biogenesis 7120
        cellular component organization 6929
          organelle organization 4320
            chromosome organization 1335
              chromatin organization 879
                covalent chromatin modification 523
                  histone modification 509
                    regulation of histone modification 184
                      positive regulation of histone modification 111
                        positive regulation of histone deacetylation 21
                          positive regulation of histone deacetylase activity 6
                          positive regulation of histone deacetylation at centromere 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.