ONTOLOGY REPORT - ANNOTATIONS


Term:regeneration
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Accession:GO:0031099 term browser browse the term
Definition:The regrowth of a lost or destroyed body part, such as an organ or tissue. This process may occur via renewal, repair, and/or growth alone (i.e. increase in size or mass).
Synonyms:xref: Wikipedia:Regeneration_(biology)


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regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:10059363
G Elavl4 ELAV like RNA binding protein 4 JBrowse link 5 130,001,387 130,144,557 RGD:1579851
animal organ regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:6893485
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:2315739
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:1625331
G Afp alpha-fetoprotein JBrowse link 14 19,141,755 19,159,919 RGD:2292044
G Ahsg alpha-2-HS-glycoprotein JBrowse link 11 81,711,269 81,717,594 RGD:1625795
G Aldoc aldolase, fructose-bisphosphate C JBrowse link 10 65,586,504 65,590,093 RGD:2301139
G Angpt1 angiopoietin 1 JBrowse link 7 81,338,327 81,592,459 RGD:1626165
G Angpt2 angiopoietin 2 JBrowse link 16 75,966,480 76,016,147 RGD:1626165
G Anxa3 annexin A3 JBrowse link 14 14,371,921 14,426,503 RGD:2316070
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1599161
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1599161
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:70662
G Apoh apolipoprotein H JBrowse link 10 96,640,013 96,653,939 RGD:1625337
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link 9 78,862,013 78,882,061 RGD:70804
G Axl Axl receptor tyrosine kinase JBrowse link 1 82,550,892 82,580,761 RGD:1579881
G Baat bile acid CoA:amino acid N-acyltransferase JBrowse link 5 64,768,397 64,777,368 RGD:69770
G Bak1 BCL2-antagonist/killer 1 JBrowse link 20 5,609,620 5,618,899 RGD:2315709
G C5ar1 complement C5a receptor 1 JBrowse link 1 78,186,777 78,195,132 RGD:1600596
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase JBrowse link 6 26,657,507 26,680,459 RGD:2303539
G Cast calpastatin JBrowse link 2 1,452,111 1,561,669 RGD:5683869
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:6784521
G Cckar cholecystokinin A receptor JBrowse link 14 59,610,939 59,619,786 RGD:2313336
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:2306994
G Ccna2 cyclin A2 JBrowse link 2 123,274,727 123,282,266 RGD:2293353
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:2289142
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:2289286
G Cdk1 cyclin-dependent kinase 1 JBrowse link 20 20,576,341 20,591,510 RGD:2301349
G Cdk2 cyclin dependent kinase 2 JBrowse link 7 3,124,953 3,132,533 RGD:2289284
G Cdk4 cyclin-dependent kinase 4 JBrowse link 7 70,345,971 70,352,689 RGD:2289284
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:2289671
G Cebpa CCAAT/enhancer binding protein alpha JBrowse link 1 91,363,492 91,366,164 RGD:1625362
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:2306581
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135273
G Ddr1 discoidin domain receptor tyrosine kinase 1 JBrowse link 20 3,553,430 3,574,959 RGD:2303414
G F7 coagulation factor VII JBrowse link 16 81,824,610 81,834,923 RGD:1304286
G Flt3 fms-related tyrosine kinase 3 JBrowse link 12 9,360,439 9,437,004 RGD:2302207
G Fpgs folylpolyglutamate synthase JBrowse link 3 11,717,667 11,729,694 RGD:2315103
G Gas6 growth arrest specific 6 JBrowse link 16 81,213,364 81,243,824 RGD:1579881
G Gata1 GATA binding protein 1 JBrowse link X 15,273,937 15,281,759 RGD:4110831
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:2317839
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:2313572
G Hmbs hydroxymethylbilane synthase JBrowse link 8 48,667,278 48,674,673 RGD:4144800
G Hmgb2 high mobility group box 2 JBrowse link 16 36,077,615 36,080,191 RGD:2316100
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:1626377
G Hspg2 heparan sulfate proteoglycan 2 JBrowse link 5 155,812,096 155,913,751 RGD:1624266
G Htr2c 5-hydroxytryptamine receptor 2C JBrowse link X 118,084,520 118,318,040 RGD:1624998
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:1298966
G Jag1 jagged canonical Notch ligand 1 JBrowse link 3 130,079,361 130,114,781 RGD:1334443
G Lcp1 lymphocyte cytosolic protein 1 JBrowse link 15 57,170,566 57,277,811 RGD:1599814
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:4110831
G Lif LIF, interleukin 6 family cytokine JBrowse link 14 84,482,652 84,500,574 RGD:1600617
RGD:2326158
G Lifr LIF receptor alpha JBrowse link 2 56,424,910 56,489,346 RGD:1600617
G Lpin1 lipin 1 JBrowse link 6 41,796,214 41,905,149 RGD:1641826
G Lrp2 LDL receptor related protein 2 JBrowse link 3 55,665,153 55,822,484 RGD:1641836
G Med1 mediator complex subunit 1 JBrowse link 10 86,101,560 86,145,271 RGD:1624291
RGD:1600115
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:2317713
G Mt-cyb mitochondrially encoded cytochrome b JBrowse link MT 14,136 15,278 RGD:2298959
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:2326001
G Nnmt nicotinamide N-methyltransferase JBrowse link 8 52,918,437 52,938,172 RGD:2299151
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:2325326
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 JBrowse link 5 151,776,004 151,779,319 RGD:2311607
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 JBrowse link 5 63,781,801 63,822,890 RGD:1566537
G Nrf1 nuclear respiratory factor 1 JBrowse link 4 57,335,732 57,445,317 RGD:2298959
G Orm1 orosomucoid 1 JBrowse link 5 79,179,668 79,182,820 RGD:2316644
G Pdx1 pancreatic and duodenal homeobox 1 JBrowse link 12 9,496,044 9,501,211 RGD:2311227
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 JBrowse link X 23,092,143 23,145,923 RGD:2302677
G Pgf placental growth factor JBrowse link 6 108,994,016 109,004,598 RGD:6483778
G Phb prohibitin JBrowse link 10 83,476,107 83,488,878 RGD:2292418
G Pkm pyruvate kinase M1/2 JBrowse link 8 64,480,963 64,502,957 RGD:2303141
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:2301877
G Ppat phosphoribosyl pyrophosphate amidotransferase JBrowse link 14 33,580,541 33,614,919 RGD:2316800
G Prps1 phosphoribosyl pyrophosphate synthetase 1 JBrowse link X 111,798,233 111,820,270 RGD:633743
G Prps2 phosphoribosyl pyrophosphate synthetase 2 JBrowse link X 28,435,275 28,472,882 RGD:633743
G Ptpru protein tyrosine phosphatase, receptor type, U JBrowse link 5 149,922,374 149,996,352 RGD:1599982
G Shc1 SHC adaptor protein 1 JBrowse link 2 188,745,503 188,757,066 RGD:1643190
G Slco1a2 solute carrier organic anion transporter family, member 1A2 JBrowse link 4 176,445,856 176,528,117 RGD:2303088
G Slco1a6 solute carrier organic anion transporter family, member 1a6 JBrowse link 4 176,345,671 176,390,729 RGD:2303088
G Socs1 suppressor of cytokine signaling 1 JBrowse link 10 4,956,795 4,958,472 RGD:2298919
G Socs3 suppressor of cytokine signaling 3 JBrowse link 10 106,973,863 106,976,969 RGD:2298919
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:2302035
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:2302035
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:2302035
G Tgfbr3 transforming growth factor beta receptor 3 JBrowse link 14 3,506,416 3,680,508 RGD:2302035
G Top1 DNA topoisomerase I JBrowse link 3 156,635,688 156,717,686 RGD:1580856
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 JBrowse link 9 95,295,701 95,302,822 RGD:2317021
G Ugt1a2 UDP glucuronosyltransferase 1 family, polypeptide A2 JBrowse link 9 95,285,592 95,302,822 RGD:2317021
G Ugt1a3 UDP glycosyltransferase 1 family, polypeptide A3 JBrowse link 9 95,274,707 95,302,822 RGD:2317021
G Upf2 UPF2, regulator of nonsense mediated mRNA decay JBrowse link 17 76,176,379 76,287,246 RGD:1624291
G Wnt1 Wnt family member 1 JBrowse link 7 140,464,999 140,469,046 RGD:2326223
G Ybx3 Y box binding protein 3 JBrowse link 4 165,606,819 165,630,041 RGD:632638
axon extension involved in regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lamb2 laminin subunit beta 2 JBrowse link 8 117,268,335 117,280,517 RGD:1624291
RGD:1600115
axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Chl1 cell adhesion molecule L1-like JBrowse link 4 70,269,414 70,331,313 RGD:1303346
G Cspg5 chondroitin sulfate proteoglycan 5 JBrowse link 8 118,333,695 118,348,040 RGD:1298825
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:632464
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:11537480
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:10054082
G Folr1 folate receptor 1 JBrowse link 1 166,934,457 166,945,864 RGD:1624291
RGD:1600115
G Gap43 growth associated protein 43 JBrowse link 11 58,624,198 58,717,916 RGD:13792537
G Isl1 ISL LIM homeobox 1 JBrowse link 2 48,488,911 48,501,217 RGD:2311122
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:1641846
G Jam3 junctional adhesion molecule 3 JBrowse link 8 28,147,110 28,208,466 RGD:7488944
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:1624291
RGD:1600115
G LOC100912195 protein BEX1-like JBrowse link 1 116,565,779 116,567,283 RGD:1624291
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:1624291
RGD:1600115
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 JBrowse link 10 14,259,394 14,299,276 RGD:13673780
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:10054082
G Nefh neurofilament heavy JBrowse link 14 85,181,572 85,191,557 RGD:9698439
G Nefm neurofilament medium JBrowse link 15 44,855,307 44,860,604 RGD:9698447
G Nrep neuronal regeneration related protein JBrowse link 18 26,183,753 26,212,796 RGD:1540387
RGD:13792537
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1643108
G Vcan versican JBrowse link 2 18,490,102 18,587,340 RGD:632591
bone regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccn3 cellular communication network factor 3 JBrowse link 7 94,375,134 94,382,154 RGD:1624291
RGD:1600115
G Fzd9 frizzled class receptor 9 JBrowse link 12 24,473,981 24,476,295 RGD:1624291
RGD:1600115
G Lgr6 leucine-rich repeat-containing G protein-coupled receptor 6 JBrowse link 13 51,811,904 51,931,193 RGD:1624291
RGD:1600115
G Postn periostin JBrowse link 2 143,656,820 143,688,087 RGD:10041014
cardiac muscle tissue regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link 9 75,021,790 76,178,936 RGD:1600115
RGD:1624291
G Gata4 GATA binding protein 4 JBrowse link 15 46,386,703 46,458,679 RGD:1624291
G Yap1 yes-associated protein 1 JBrowse link 8 6,133,014 6,204,240 RGD:1600115
RGD:1624291
dendrite regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:2315724
G Matn2 matrilin 2 JBrowse link 7 72,985,832 73,210,093 RGD:1624291
RGD:1600115
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:14397577
liver regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:8548508
G Alas2 5'-aminolevulinate synthase 2 JBrowse link X 23,167,576 23,187,356 RGD:11035238
G Angpt1 angiopoietin 1 JBrowse link 7 81,338,327 81,592,459 RGD:704403
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 JBrowse link 10 59,528,849 59,560,440 RGD:13782137
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1600115
RGD:1624291
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11531107
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:1624291
RGD:1600115
G Cebpb CCAAT/enhancer binding protein beta JBrowse link 3 164,424,502 164,425,933 RGD:1624291
RGD:1600115
G Cftr cystic fibrosis transmembrane conductance regulator JBrowse link 4 42,693,263 42,860,679 RGD:11567227
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:11344894
G Cpb2 carboxypeptidase B2 JBrowse link 15 57,290,849 57,339,762 RGD:7243112
G Csnk2a1 casein kinase 2 alpha 1 JBrowse link 3 147,713,808 147,760,375 RGD:11565141
G Csnk2a2 casein kinase 2 alpha 2 JBrowse link 19 9,972,537 10,012,043 RGD:11565141
G Csnk2b casein kinase 2 beta JBrowse link 20 5,108,692 5,113,675 RGD:11565141
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:10395295
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit JBrowse link 10 89,104,026 89,139,978 RGD:1624291
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:1624291
RGD:1600115
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:8662889
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:728788
G Flt1 FMS-related tyrosine kinase 1 JBrowse link 12 9,033,993 9,205,886 RGD:10402121
G Gfer growth factor, augmenter of liver regeneration JBrowse link 10 14,059,347 14,061,703 RGD:9685725
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:1624291
RGD:12911223
RGD:12832760
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:12911223
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:8694419
G Hfe homeostatic iron regulator JBrowse link 17 43,661,276 43,669,327 RGD:8694419
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:10755743
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 JBrowse link 1 199,248,084 199,251,745 RGD:1599972
G Ihh Indian hedgehog signaling molecule JBrowse link 9 82,208,223 82,214,440 RGD:12911223
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11049526
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:13793384
G Klkb1 kallikrein B1 JBrowse link 16 50,151,127 50,175,407 RGD:7297052
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:10059623
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:9686389
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:10413865
G Npm1 nucleophosmin 1 JBrowse link 10 18,080,949 18,091,062 RGD:11534994
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:10448980
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 14 113,530,470 113,561,645 RGD:11554175
G Pou2f1 POU class 2 homeobox 1 JBrowse link 13 84,075,316 84,217,368 RGD:9743904
G Prmt1 protein arginine methyltransferase 1 JBrowse link 1 100,971,132 100,980,411 RGD:2299961
G Prmt5 protein arginine methyltransferase 5 JBrowse link 15 33,156,508 33,165,893 RGD:2299961
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:12911223
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 JBrowse link 5 74,248,996 74,368,167 RGD:1599982
G Rap1a RAP1A, member of RAS oncogene family JBrowse link 2 208,193,950 208,215,186 RGD:10003155
G Rapgef3 Rap guanine nucleotide exchange factor 3 JBrowse link 7 139,232,263 139,254,668 RGD:9850085
G Reg1a regenerating family member 1 alpha JBrowse link 4 109,497,962 109,500,626 RGD:10044030
G Rgn regucalcin JBrowse link X 1,833,484 1,848,904 RGD:9590197
G Rpl10 ribosomal protein L10 JBrowse link X 156,438,251 156,440,461 RGD:11038709
G Rpl13 ribosomal protein L13 JBrowse link 19 55,917,489 55,920,040 RGD:11038709
G Rpl18 ribosomal protein L18 JBrowse link 1 101,700,910 101,703,551 RGD:11038709
G Rpl19 ribosomal protein L19 JBrowse link 10 85,978,691 85,981,979 RGD:11038709
G Rpl30 ribosomal protein L30 JBrowse link 7 73,213,538 73,216,431 RGD:11038709
G Rpl32 ribosomal protein L32 JBrowse link 4 147,715,480 147,719,044 RGD:11038709
G Rpl7 ribosomal protein L7 JBrowse link 5 2,633,517 2,636,525 RGD:11038709
G Rps15 ribosomal protein S15 JBrowse link 7 12,282,134 12,283,573 RGD:11040696
G Rps16 ribosomal protein S16 JBrowse link 1 85,405,499 85,408,444 RGD:11038709
G Rps24 ribosomal protein S24 JBrowse link 16 757,390 762,091 RGD:11041663
G Serpina10 serpin family A member 10 JBrowse link 6 127,500,014 127,508,470 RGD:729731
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:12832760
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link 10 75,334,200 75,341,197 RGD:9685423
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link 6 104,611,026 104,640,033 RGD:729792
G Sulf2 sulfatase 2 JBrowse link 3 162,791,349 162,872,984 RGD:1624291
RGD:1600115
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11073669
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:2317422
G Ucp2 uncoupling protein 2 JBrowse link 1 165,506,375 165,512,744 RGD:7204431
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:10003090
G Vwf von Willebrand factor JBrowse link 4 158,085,059 158,219,525 RGD:727737
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:11553927
myoblast differentiation involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
G Mapk14 mitogen activated protein kinase 14 JBrowse link 20 5,933,290 5,995,137 RGD:1624291
G Mir489 microRNA 489 JBrowse link 4 28,659,523 28,659,628 RGD:1624291
G Wnt10b Wnt family member 10B JBrowse link 7 140,448,284 140,466,159 RGD:1624291
RGD:1600115
myoblast fusion involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd81 Cd81 molecule JBrowse link 1 216,237,663 216,253,460 RGD:1600115
RGD:1624291
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:1600115
RGD:1624291
G Mymk myomaker, myoblast fusion factor JBrowse link 3 5,608,243 5,617,689 RGD:1624291
G Mymx myomixer, myoblast fusion factor JBrowse link 9 17,781,397 17,783,074 RGD:1624291
G Ptgfrn prostaglandin F2 receptor inhibitor JBrowse link 2 203,423,143 203,494,391 RGD:1600115
RGD:1624291
myoblast migration involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akirin1 akirin 1 JBrowse link 5 141,415,226 141,430,627 RGD:1600115
RGD:1624291
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:1624291
RGD:13792537
G Bin3 bridging integrator 3 JBrowse link 15 51,799,339 51,818,697 RGD:1624291
RGD:1600115
G Mstn myostatin JBrowse link 9 53,310,977 53,315,804 RGD:1600115
RGD:1624291
myotube differentiation involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl9 BCL9, transcription coactivator JBrowse link 2 199,334,644 199,420,083 RGD:1624291
RGD:1600115
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
RGD:1600115
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:1600115
negative regulation of axon extension involved in regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tnr tenascin R JBrowse link 13 77,602,249 77,678,385 RGD:1624291
RGD:1600115
negative regulation of axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cers2 ceramide synthase 2 JBrowse link 2 196,487,656 196,495,930 RGD:11041067
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:5688750
RGD:1600115
RGD:1624291
RGD:5688782
G Inpp5f inositol polyphosphate-5-phosphatase F JBrowse link 1 200,037,749 200,116,524 RGD:1624291
RGD:1600115
G Klk8 kallikrein related-peptidase 8 JBrowse link 1 99,735,168 99,742,011 RGD:1600115
RGD:1624291
G Kremen1 kringle containing transmembrane protein 1 JBrowse link 14 85,441,209 85,503,661 RGD:1600115
RGD:1624291
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 JBrowse link 2 206,928,708 206,997,915 RGD:1624291
RGD:1600115
G Neo1 neogenin 1 JBrowse link 8 63,649,871 63,756,394 RGD:1624291
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
RGD:1600115
G Ptprs protein tyrosine phosphatase, receptor type, S JBrowse link 9 10,585,360 10,646,205 RGD:1600115
RGD:1624291
G Rgma repulsive guidance molecule BMP co-receptor a JBrowse link 1 134,699,053 134,742,512 RGD:9850138
G Rtn4r reticulon 4 receptor JBrowse link 11 86,992,665 87,017,091 RGD:1624291
RGD:1600115
G Rtn4rl1 reticulon 4 receptor-like 1 JBrowse link 10 62,035,866 62,109,075 RGD:1624291
RGD:1600115
G Xylt1 xylosyltransferase 1 JBrowse link 1 186,939,698 187,264,758 RGD:2313145
negative regulation of cardiac muscle tissue regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:1624291
RGD:1600115
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:1600115
RGD:1624291
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:1581125
negative regulation of epithelium regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dusp10 dual specificity phosphatase 10 JBrowse link 13 104,284,660 104,321,455 RGD:1624291
RGD:1600115
negative regulation of formation of growth cone in injured axon term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtn4 reticulon 4 JBrowse link 14 114,126,931 114,174,459 RGD:1624291
negative regulation of neuron projection regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 JBrowse link 9 46,657,444 46,782,545 RGD:2303352
G Rtn4 reticulon 4 JBrowse link 14 114,126,931 114,174,459 RGD:2314943
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:12793046
RGD:1624291
negative regulation of Schwann cell proliferation involved in axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cers2 ceramide synthase 2 JBrowse link 2 196,487,656 196,495,930 RGD:11041067
negative regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myoz1 myozenin 1 JBrowse link 15 4,077,066 4,084,306 RGD:1600115
RGD:1624291
neuron projection regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:1625313
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1358286
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:1624291
RGD:1600115
G Nos1ap nitric oxide synthase 1 adaptor protein JBrowse link 13 88,653,123 88,943,976 RGD:7327170
G Omg oligodendrocyte-myelin glycoprotein JBrowse link 10 66,845,654 66,848,388 RGD:1624291
RGD:13792537
G Ptprf protein tyrosine phosphatase, receptor type, F JBrowse link 5 137,036,936 137,112,930 RGD:1624291
RGD:1600115
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:1580344
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link 12 51,908,105 51,934,704 RGD:2303352
pancreas regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Reg1a regenerating family member 1 alpha JBrowse link 4 109,497,962 109,500,626 RGD:729900
peripheral nervous system axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:2311210
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:2311210
G Apod apolipoprotein D JBrowse link 11 72,705,204 72,726,263 RGD:2311210
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:2311210
G Calu calumenin JBrowse link 4 56,625,611 56,653,112 RGD:2316214
G Chst3 carbohydrate sulfotransferase 3 JBrowse link 20 29,731,828 29,768,656 RGD:1600854
G Map1b microtubule-associated protein 1B JBrowse link 2 29,675,391 29,768,750 RGD:2304028
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:1582605
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:2326091
G Nefl neurofilament light JBrowse link 15 44,799,378 44,803,251 RGD:1624291
RGD:1600115
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:1624291
RGD:1600115
G Tspo translocator protein JBrowse link 7 124,460,358 124,470,610 RGD:2317177
positive regulation of axon extension involved in regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cntf ciliary neurotrophic factor JBrowse link 1 229,599,009 229,601,032 RGD:12793002
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800520
G Ntrk3 neurotrophic receptor tyrosine kinase 3 JBrowse link 1 139,890,537 140,262,503 RGD:1624291
RGD:1600115
G Ocm2 oncomodulin 2 JBrowse link 12 12,611,121 12,634,472 RGD:12793002
positive regulation of axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291
RGD:1600115
G Cntf ciliary neurotrophic factor JBrowse link 1 229,599,009 229,601,032 RGD:1626128
RGD:13792537
G Fkbp1b FKBP prolyl isomerase 1B JBrowse link 6 29,975,863 29,987,252 RGD:7205517
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:1600115
RGD:1624291
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:10046026
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1642004
G Ndel1 nudE neurodevelopment protein 1-like 1 JBrowse link 10 55,398,919 55,456,654 RGD:2306515
G Nrg1 neuregulin 1 JBrowse link 16 62,969,573 64,065,063 RGD:10449012
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:14397577
G Scarf1 scavenger receptor class F, member 1 JBrowse link 10 63,662,967 63,683,916 RGD:1624291
G Stk24 serine/threonine kinase 24 JBrowse link 15 106,629,258 106,678,917 RGD:2317003
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800520
G Rtn4 reticulon 4 JBrowse link 14 114,126,931 114,174,459 RGD:1624291
positive regulation of epithelium regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:1624958
positive regulation of neuron projection regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:2317487
positive regulation of optical nerve axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ocm2 oncomodulin 2 JBrowse link 12 12,611,121 12,634,472 RGD:12793002
positive regulation of satellite cell activation involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Capn3 calpain 3 JBrowse link 3 112,227,486 112,278,408 RGD:1600115
RGD:1624291
G Sox15 SRY box 15 JBrowse link 10 56,260,514 56,263,503 RGD:1624291
positive regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hopx HOP homeobox JBrowse link 14 33,354,803 33,362,547 RGD:1624291
RGD:1600115
G Mir675 microRNA 675 JBrowse link 1 215,745,981 215,746,064 RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:8554766
RGD:1600115
G Ppard peroxisome proliferator-activated receptor delta JBrowse link 20 7,818,289 7,883,482 RGD:1600115
RGD:1624291
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:1601614
regulation of axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:1624291
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291
G Klf4 Kruppel like factor 4 JBrowse link 5 72,283,311 72,287,669 RGD:1624291
RGD:1600115
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 JBrowse link 2 206,928,708 206,997,915 RGD:1624291
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:1624291
RGD:1600115
G Map2k2 mitogen activated protein kinase kinase 2 JBrowse link 7 11,458,971 11,478,520 RGD:1624291
RGD:1600115
G Neo1 neogenin 1 JBrowse link 8 63,649,871 63,756,394 RGD:1624291
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
G Ptprf protein tyrosine phosphatase, receptor type, F JBrowse link 5 137,036,936 137,112,930 RGD:1624291
RGD:1600115
G Stk24 serine/threonine kinase 24 JBrowse link 15 106,629,258 106,678,917 RGD:1600115
RGD:1624291
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Omg oligodendrocyte-myelin glycoprotein JBrowse link 10 66,845,654 66,848,388 RGD:1624291
regulation of epithelium regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eppk1 epiplakin 1 JBrowse link 7 117,163,383 117,173,741 RGD:1624291
regulation of neuron projection regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prrx1 paired related homeobox 1 JBrowse link 13 81,147,038 81,215,559 RGD:1624291
RGD:1600115
regulation of satellite cell activation involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gjd4 gap junction protein, delta 4 JBrowse link 17 62,297,086 62,299,655 RGD:1624291
RGD:1600115
regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G P2rx5 purinergic receptor P2X 5 JBrowse link 10 59,725,438 59,737,126 RGD:729229
satellite cell activation involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
RGD:1600115
skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:1624291
RGD:1600115
G Fzd7 frizzled class receptor 7 JBrowse link 9 66,305,731 66,308,550 RGD:1624291
RGD:1600115
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Selenon selenoprotein N JBrowse link 5 152,748,497 152,765,489 RGD:1624291
RGD:1600115
G Wnt7a Wnt family member 7A JBrowse link 4 122,994,425 123,040,609 RGD:1624291
RGD:1600115
skeletal muscle tissue regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bin3 bridging integrator 3 JBrowse link 15 51,799,339 51,818,697 RGD:1624291
G Cflar CASP8 and FADD-like apoptosis regulator JBrowse link 9 65,534,608 65,586,395 RGD:1624291
RGD:1600115
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:11541049
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:11541049
G Dysf dysferlin JBrowse link 4 115,700,942 115,901,873 RGD:1624291
RGD:1600115
G Eno3 enolase 3 JBrowse link 10 57,278,271 57,283,661 RGD:2301764
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:1624291
RGD:1600115
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:1624291
RGD:1600115
G Ifrd1 interferon-related developmental regulator 1 JBrowse link 6 60,132,025 60,151,354 RGD:1624291
RGD:1600115
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 19 12,481,563 12,945,320 RGD:1624291
RGD:1600115
G Mstn myostatin JBrowse link 9 53,310,977 53,315,804 RGD:2303599
G Mtpn myotrophin JBrowse link 4 63,012,009 63,039,422 RGD:632798
G Myf6 myogenic factor 6 JBrowse link 7 49,739,643 49,741,490 RGD:1600530
G Mymk myomaker, myoblast fusion factor JBrowse link 3 5,608,243 5,617,689 RGD:1624291
G Mymx myomixer, myoblast fusion factor JBrowse link 9 17,781,397 17,783,074 RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:9686074
RGD:729226
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:9686125
G Naca nascent polypeptide associated complex subunit alpha JBrowse link 7 2,458,283 2,470,674 RGD:1624291
G Pax7 paired box 7 JBrowse link 5 158,211,001 158,313,510 RGD:1624291
RGD:1600115
G Pkm pyruvate kinase M1/2 JBrowse link 8 64,480,963 64,502,957 RGD:2303143
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:1581928
G Plaur plasminogen activator, urokinase receptor JBrowse link 1 81,328,171 81,344,954 RGD:1581928
G Selenon selenoprotein N JBrowse link 5 152,748,497 152,765,489 RGD:1624291
G Sgca sarcoglycan, alpha JBrowse link 10 82,770,905 82,785,142 RGD:11541049
G Sox15 SRY box 15 JBrowse link 10 56,260,514 56,263,503 RGD:1624291
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link 7 144,121,688 144,126,860 RGD:1624291
RGD:1600115
G Vim vimentin JBrowse link 17 80,882,715 80,891,200 RGD:6480441
G Wnt10b Wnt family member 10B JBrowse link 7 140,448,284 140,466,159 RGD:1624291
tissue regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam15 ADAM metallopeptidase domain 15 JBrowse link 2 188,661,831 188,672,337 RGD:632016
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:1600115
RGD:1624291
G Apod apolipoprotein D JBrowse link 11 72,705,204 72,726,263 RGD:634662
G Axl Axl receptor tyrosine kinase JBrowse link 1 82,550,892 82,580,761 RGD:1579881
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:1299843
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:1624291
RGD:1600115
G Cpq carboxypeptidase Q JBrowse link 7 71,709,174 72,167,413 RGD:633681
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:632595
G Fgf10 fibroblast growth factor 10 JBrowse link 2 51,673,480 51,747,533 RGD:727503
G Gap43 growth associated protein 43 JBrowse link 11 58,624,198 58,717,916 RGD:728776
RGD:13792537
G Gas6 growth arrest specific 6 JBrowse link 16 81,213,364 81,243,824 RGD:1579881
G Gatm glycine amidinotransferase JBrowse link 3 114,711,570 114,728,155 RGD:1599814
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1599866
G Igfbp1 insulin-like growth factor binding protein 1 JBrowse link 14 87,448,716 87,453,783 RGD:1578549
G Igsf10 immunoglobulin superfamily, member 10 JBrowse link 2 149,535,199 149,564,180 RGD:1302504
G Ina internexin neuronal intermediate filament protein, alpha JBrowse link 1 266,782,835 266,794,389 RGD:628341
G Lgr6 leucine-rich repeat-containing G protein-coupled receptor 6 JBrowse link 13 51,811,904 51,931,193 RGD:1624291
G Mdk midkine JBrowse link 3 80,841,003 80,843,895 RGD:1600115
G Mustn1 musculoskeletal, embryonic nuclear protein 1 JBrowse link 16 6,962,737 6,964,987 RGD:1302424
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:8661679
G Ninj1 ninjurin 1 JBrowse link 17 15,866,235 15,881,284 RGD:1600115
G Ninj2 ninjurin 2 JBrowse link 4 152,630,464 152,733,631 RGD:1600115
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1334443
RGD:1581403
G Notch2 notch receptor 2 JBrowse link 2 200,187,184 200,320,403 RGD:1581404
G Notch3 notch receptor 3 JBrowse link 7 14,138,495 14,189,688 RGD:1581404
G Plg plasminogen JBrowse link 1 48,521,828 48,563,895 RGD:1624291
RGD:1600115
G Prkcq protein kinase C, theta JBrowse link 17 70,971,915 71,105,286 RGD:1625612
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:1600115
G Ptpn12 protein tyrosine phosphatase, non-receptor type 12 JBrowse link 4 10,631,129 10,702,390 RGD:1599982
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:1580125
G Sox2 SRY box 2 JBrowse link 2 121,165,137 121,167,545 RGD:8661679
G Tec tec protein tyrosine kinase JBrowse link 14 37,918,884 38,027,953 RGD:631955
RGD:13792537
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link 7 23,543,125 23,594,170 RGD:1600154
G Tm4sf4 transmembrane 4 L six family member 4 JBrowse link 2 147,532,032 147,547,254 RGD:634233
G Ucn2 urocortin 2 JBrowse link 8 117,727,216 117,728,765 RGD:724785

Term paths to the root
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Term Annotations click to browse term
  biological_process 17895
    developmental process 6321
      anatomical structure development 5927
        regeneration 313
          animal organ regeneration + 154
          neuron projection regeneration + 81
          tissue regeneration + 94
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.