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ONTOLOGY REPORT - ANNOTATIONS


Term:axon regeneration
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Accession:GO:0031103 term browser browse the term
Definition:The regrowth of axons following their loss or damage.


show annotations for term's descendants       view all columns           Sort by:
 
axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Chl1 cell adhesion molecule L1-like JBrowse link 4 70,269,414 70,331,313 RGD:1303346
G Cspg5 chondroitin sulfate proteoglycan 5 JBrowse link 8 118,333,695 118,348,040 RGD:1298825
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:632464
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:11537480
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:10054082
G Folr1 folate receptor alpha JBrowse link 1 166,934,457 166,945,864 RGD:1624291
RGD:1600115
G Gap43 growth associated protein 43 JBrowse link 11 58,624,198 58,717,916 RGD:13792537
G Isl1 ISL LIM homeobox 1 JBrowse link 2 48,488,911 48,501,217 RGD:2311122
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:1641846
G Jam3 junctional adhesion molecule 3 JBrowse link 8 28,147,110 28,208,466 RGD:7488944
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:1624291
RGD:1600115
G LOC100912195 protein BEX1-like JBrowse link 1 116,565,779 116,567,283 RGD:1624291
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:1624291
RGD:1600115
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 JBrowse link 10 14,259,394 14,299,276 RGD:13673780
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:10054082
G Nefh neurofilament heavy JBrowse link 14 85,181,572 85,191,557 RGD:9698439
G Nefm neurofilament medium JBrowse link 15 44,855,307 44,860,604 RGD:9698447
G Nrep neuronal regeneration related protein JBrowse link 18 26,183,753 26,212,796 RGD:1540387
RGD:13792537
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1643108
G Vcan versican JBrowse link 2 18,490,102 18,587,340 RGD:632591
axon extension involved in regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lamb2 laminin subunit beta 2 JBrowse link 8 117,268,335 117,280,517 RGD:1624291
RGD:1600115
negative regulation of axon extension involved in regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RGD1307443 similar to mKIAA0319 protein JBrowse link 17 42,163,245 42,226,725 RGD:1624291
G Tnr tenascin R JBrowse link 13 77,602,249 77,678,385 RGD:1624291
RGD:1600115
negative regulation of axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cers2 ceramide synthase 2 JBrowse link 2 196,487,656 196,495,930 RGD:11041067
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:5688750
RGD:1600115
RGD:1624291
RGD:5688782
G Inpp5f inositol polyphosphate-5-phosphatase F JBrowse link 1 200,037,749 200,116,524 RGD:1624291
RGD:1600115
G Klk8 kallikrein related-peptidase 8 JBrowse link 1 99,735,168 99,742,011 RGD:1600115
RGD:1624291
G Kremen1 kringle containing transmembrane protein 1 JBrowse link 14 85,441,209 85,503,661 RGD:1600115
RGD:1624291
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 JBrowse link 2 206,928,708 206,997,915 RGD:1624291
RGD:1600115
G Neo1 neogenin 1 JBrowse link 8 63,649,871 63,756,394 RGD:1624291
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
RGD:1600115
G Ptprs protein tyrosine phosphatase, receptor type, S JBrowse link 9 10,585,360 10,646,205 RGD:1600115
RGD:1624291
G Rgma repulsive guidance molecule BMP co-receptor a JBrowse link 1 134,699,053 134,742,512 RGD:9850138
G Rtn4r reticulon 4 receptor JBrowse link 11 86,992,665 87,017,091 RGD:1624291
RGD:1600115
G Rtn4rl1 reticulon 4 receptor-like 1 JBrowse link 10 62,035,866 62,109,075 RGD:1624291
RGD:1600115
G Xylt1 xylosyltransferase 1 JBrowse link 1 186,939,698 187,264,758 RGD:2313145
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:1581125
negative regulation of formation of growth cone in injured axon term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtn4 reticulon 4 JBrowse link 14 114,126,931 114,174,459 RGD:1624291
negative regulation of Schwann cell proliferation involved in axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cers2 ceramide synthase 2 JBrowse link 2 196,487,656 196,495,930 RGD:11041067
peripheral nervous system axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:2311210
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:2311210
G Apod apolipoprotein D JBrowse link 11 72,705,204 72,726,263 RGD:2311210
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:2311210
G Calu calumenin JBrowse link 4 56,625,611 56,653,112 RGD:2316214
G Chst3 carbohydrate sulfotransferase 3 JBrowse link 20 29,731,828 29,768,656 RGD:1600854
G Map1b microtubule-associated protein 1B JBrowse link 2 29,675,391 29,768,750 RGD:2304028
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:1582605
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:2326091
G Nefl neurofilament light JBrowse link 15 44,799,378 44,803,251 RGD:1624291
RGD:1600115
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:1624291
RGD:1600115
G Tspo translocator protein JBrowse link 7 124,460,358 124,470,610 RGD:2317177
positive regulation of axon extension involved in regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cntf ciliary neurotrophic factor JBrowse link 1 229,599,009 229,601,032 RGD:12793002
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800520
G Ntrk3 neurotrophic receptor tyrosine kinase 3 JBrowse link 1 139,890,537 140,262,503 RGD:1624291
RGD:1600115
G Ocm2 oncomodulin 2 JBrowse link 12 12,611,121 12,634,472 RGD:12793002
positive regulation of axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291
RGD:1600115
G Cntf ciliary neurotrophic factor JBrowse link 1 229,599,009 229,601,032 RGD:1626128
RGD:13792537
G Fkbp1b FKBP prolyl isomerase 1B JBrowse link 6 29,975,863 29,987,252 RGD:7205517
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:1600115
RGD:1624291
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:10046026
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1642004
G Ndel1 nudE neurodevelopment protein 1-like 1 JBrowse link 10 55,398,919 55,456,654 RGD:2306515
G Nrg1 neuregulin 1 JBrowse link 16 62,969,573 64,065,063 RGD:10449012
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:14397577
G Scarf1 scavenger receptor class F, member 1 JBrowse link 10 63,662,967 63,683,916 RGD:1624291
G Stk24 serine/threonine kinase 24 JBrowse link 15 106,629,258 106,678,917 RGD:2317003
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800520
G Rtn4 reticulon 4 JBrowse link 14 114,126,931 114,174,459 RGD:1624291
positive regulation of optical nerve axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ocm2 oncomodulin 2 JBrowse link 12 12,611,121 12,634,472 RGD:12793002
regulation of axon regeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:1624291
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291
G Klf4 Kruppel like factor 4 JBrowse link 5 72,283,311 72,287,669 RGD:1624291
RGD:1600115
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 JBrowse link 2 206,928,708 206,997,915 RGD:1624291
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:1624291
RGD:1600115
G Map2k2 mitogen activated protein kinase kinase 2 JBrowse link 7 11,458,971 11,478,520 RGD:1624291
RGD:1600115
G Neo1 neogenin 1 JBrowse link 8 63,649,871 63,756,394 RGD:1624291
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
G Ptprf protein tyrosine phosphatase, receptor type, F JBrowse link 5 137,036,936 137,112,930 RGD:1624291
RGD:1600115
G Stk24 serine/threonine kinase 24 JBrowse link 15 106,629,258 106,678,917 RGD:1600115
RGD:1624291
regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Omg oligodendrocyte-myelin glycoprotein JBrowse link 10 66,845,654 66,848,388 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18166
    developmental process 6539
      anatomical structure development 6020
        regeneration 316
          neuron projection regeneration 82
            axon regeneration 71
              MAPK cascade involved in axon regeneration + 0
              axon regeneration at neuromuscular junction 0
              collateral sprouting of intact axon in response to injury + 2
              negative regulation of axon regeneration + 17
              optical nerve axon regeneration + 1
              peripheral nervous system axon regeneration + 13
              positive regulation of axon regeneration + 15
              regulation of axon regeneration + 37
              sprouting of injured axon + 8
Path 2
Term Annotations click to browse term
  biological_process 18166
    developmental process 6539
      anatomical structure development 6020
        multicellular organism development 5501
          system development 5050
            nervous system development 2583
              neurogenesis 1869
                generation of neurons 1735
                  neuron differentiation 1563
                    neuron development 1273
                      neuron projection development 1126
                        axon development 532
                          axon regeneration 71
                            MAPK cascade involved in axon regeneration + 0
                            axon regeneration at neuromuscular junction 0
                            collateral sprouting of intact axon in response to injury + 2
                            negative regulation of axon regeneration + 17
                            optical nerve axon regeneration + 1
                            peripheral nervous system axon regeneration + 13
                            positive regulation of axon regeneration + 15
                            regulation of axon regeneration + 37
                            sprouting of injured axon + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.