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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasmic microtubule organization
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Accession:GO:0031122 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell.
Synonyms:exact_synonym: cytoplasmic microtubule organisation
 related_synonym: cytoplasmic microtubule organization and biogenesis


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cytoplasmic microtubule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CAMSAP1 calmodulin regulated spectrin associated protein 1 RGD:14298760
G CAMSAP2 calmodulin regulated spectrin associated protein family member 2 JBrowse link 10 23,275,302 23,360,167 RGD:14298760
G CAMSAP3 calmodulin regulated spectrin associated protein family member 3 JBrowse link 2 71,531,607 71,547,413 RGD:14298760
G CAV3 caveolin 3 JBrowse link 13 65,117,868 65,130,886 RGD:14298760
G CCDC88A coiled-coil domain containing 88A JBrowse link 3 85,811,043 85,971,162 RGD:14298760
G CCDC88C coiled-coil domain containing 88C JBrowse link 7 112,917,436 113,030,442 RGD:14298760
G CEP126 centrosomal protein 126 JBrowse link 9 32,631,859 32,715,458 RGD:14298760
G CIB1 calcium and integrin binding 1 JBrowse link 7 55,794,834 55,798,666 RGD:14298760
G CRIPT CXXC repeat containing interactor of PDZ3 domain JBrowse link 3 93,911,425 93,925,916 RGD:14298760
G DST dystonin JBrowse link 7 28,812,423 29,300,149 RGD:14298760
G DVL1 dishevelled segment polarity protein 1 JBrowse link 6 63,617,787 63,628,965 RGD:14298760
G FIGN fidgetin, microtubule severing factor JBrowse link 15 70,255,270 70,394,095 RGD:14298760
G FIGNL1 fidgetin like 1 JBrowse link 9 136,484,217 136,488,262 RGD:14298760
G FIGNL2 fidgetin like 2 JBrowse link 5 17,178,239 17,209,297 RGD:14298760
G FSD1 fibronectin type III and SPRY domain containing 1 JBrowse link 2 74,471,744 74,485,788 RGD:14298760
G HOOK1 hook microtubule tethering protein 1 JBrowse link 6 152,636,118 152,709,422 RGD:14298760
G HOOK2 hook microtubule tethering protein 2 JBrowse link 2 66,227,562 66,239,671 RGD:14298760
G HOOK3 hook microtubule tethering protein 3 JBrowse link 17 11,817,963 11,919,152 RGD:14298760
G IFT172 intraflagellar transport 172 JBrowse link 3 111,683,674 111,718,504 RGD:14298760
G KATNA1 katanin catalytic subunit A1 JBrowse link 1 16,330,854 16,360,801 RGD:14298760
G KATNAL1 katanin catalytic subunit A1 like 1 JBrowse link 11 6,998,003 7,064,986 RGD:14298760
G KATNAL2 katanin catalytic subunit A1 like 2 JBrowse link 1 96,566,852 96,676,184 RGD:14298760
G MAP10 microtubule associated protein 10 JBrowse link 14 57,967,663 57,978,573 RGD:14298760
G PCM1 pericentriolar material 1 JBrowse link 17 5,596,926 5,705,752 RGD:14298760
G PLK3 polo like kinase 3 JBrowse link 6 166,528,760 166,533,734 RGD:14298760
G SLK STE20 like kinase JBrowse link 14 114,898,963 114,957,494 RGD:14298760
G SPAST spastin JBrowse link 3 107,439,810 107,508,915 RGD:14298760
G STMN3 stathmin 3 JBrowse link 17 62,600,450 62,609,851 RGD:14298760
G TUBG1 tubulin gamma 1 RGD:14298760
G TUBGCP2 tubulin gamma complex associated protein 2 JBrowse link 14 141,233,854 141,253,377 RGD:14298760
G TUBGCP3 tubulin gamma complex associated protein 3 JBrowse link 11 78,190,725 78,232,252 RGD:14298760
G TUBGCP4 tubulin gamma complex associated protein 4 JBrowse link 1 128,029,393 128,084,039 RGD:14298760
G TUBGCP5 tubulin gamma complex associated protein 5 JBrowse link 15 31,995,727 32,042,297 RGD:14298760
G TUBGCP6 tubulin gamma complex associated protein 6 JBrowse link 5 445,528 467,537 RGD:14298760
astral microtubule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEP120 centrosomal protein 120 JBrowse link 2 126,840,262 126,930,117 RGD:14298760
G CLASP1 cytoplasmic linker associated protein 1 JBrowse link 15 29,782,613 30,042,727 RGD:14298760
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 13 132,819,931 133,084,880 RGD:14298760
G EZR ezrin JBrowse link 1 8,403,362 8,452,750 RGD:14298760
G NUMA1 nuclear mitotic apparatus protein 1 JBrowse link 9 6,591,943 6,662,966 RGD:14298760
G RAB11A RAB11A, member RAS oncogene family JBrowse link 1 163,858,254 163,887,741 RGD:14298760
axonemal microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KIF19 kinesin family member 19 JBrowse link 12 6,775,695 6,803,066 RGD:14298760
cortical microtubule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 13 132,819,931 133,084,880 RGD:14298760
G EZR ezrin JBrowse link 1 8,403,362 8,452,750 RGD:14298760
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 JBrowse link 12 48,567,329 48,735,836 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15257
    cellular process 13567
      microtubule-based process 619
        microtubule cytoskeleton organization 470
          cytoplasmic microtubule organization 42
            astral microtubule organization + 6
            cortical microtubule organization 3
            cytoplasmic microtubule depolymerization + 1
Path 2
Term Annotations click to browse term
  biological_process 15257
    cellular component organization or biogenesis 4693
      cellular component organization 4540
        organelle organization 2866
          cytoskeleton organization 1056
            microtubule cytoskeleton organization 470
              cytoplasmic microtubule organization 42
                astral microtubule organization + 6
                cortical microtubule organization 3
                cytoplasmic microtubule depolymerization + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.