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ONTOLOGY REPORT - ANNOTATIONS


Term:biomineral tissue development
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Accession:GO:0031214 term browser browse the term
Definition:Formation of hard tissues that consist mainly of inorganic compounds, and also contain a small amounts of organic matrices that are believed to play important roles in their formation.
Synonyms:xref: Wikipedia:Biomineralization


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biomineral tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (MGI:5318020|PMID:19900459) UniProt PMID:19900459 MGI:5318020 NCBI chrNW_004955462:13,578,638...13,644,834
Ensembl chrNW_004955462:13,584,724...13,642,968
JBrowse link
G Dspp dentin sialophosphoprotein ISO RGD PMID:20425127 RGD:4110819 NCBI chrNW_004955474:2,254,842...2,259,303 JBrowse link
G Fam20a FAM20A golgi associated secretory pathway pseudokinase ISO (PMID:25789606) UniProtKB PMID:25789606 NCBI chrNW_004955478:4,182,568...4,236,819
Ensembl chrNW_004955478:4,182,568...4,236,819
JBrowse link
G Fam20c FAM20C golgi associated secretory pathway kinase ISO (PMID:22582013), (PMID:25789606) UniProtKB PMID:22582013, PMID:25789606 NCBI chrNW_004955460:8,142,325...8,192,044
Ensembl chrNW_004955460:8,143,824...8,193,825
JBrowse link
G Slc20a1 solute carrier family 20 member 1 ISO (MGI:5812283|PMID:27812542) MGI PMID:27812542 MGI:5812283 NCBI chrNW_004955470:1,634,470...1,649,234
Ensembl chrNW_004955470:1,634,476...1,649,234
JBrowse link
bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase ISO (MGI:2686849|PMID:14716014) MGI PMID:14716014 MGI:2686849 NCBI chrNW_004955467:10,032,792...10,039,789 JBrowse link
G Aspn asporin ISO (PMID:19589127) UniProtKB PMID:19589127 NCBI chrNW_004955515:5,322,074...5,345,715
Ensembl chrNW_004955515:5,321,943...5,345,894
JBrowse link
G Atf4 activating transcription factor 4 ISO (MGI:3040115|PMID:15109498) UniProt PMID:15109498 MGI:3040115 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Axin2 axin 2 ISO (MGI:4818263|PMID:19623616) MGI PMID:19623616 MGI:4818263 NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO (MGI:3850932|PMID:19213727)
(MGI:3528531|PMID:15657444), (MGI:3850932|PMID:19213727)
MGI PMID:15657444, PMID:19213727 MGI:3528531, MGI:3850932 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist ISO (PMID:19113921) BHF-UCL PMID:19113921 NCBI chrNW_004955434:17,738,281...17,740,823
Ensembl chrNW_004955434:17,734,495...17,740,823
JBrowse link
G Clec3b C-type lectin domain family 3 member B ISO (PMID:7589422)
(PMID:7798325)
UniProtKB PMID:7589422, PMID:7798325 NCBI chrNW_004955420:26,665,472...26,669,474 JBrowse link
G Col1a2 collagen type I alpha 2 chain ISO (MGI:5468210|PMID:22910579) MGI PMID:22910579 MGI:5468210 NCBI chrNW_004955432:11,127,961...11,164,145
Ensembl chrNW_004955432:11,128,112...11,163,302
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO (MGI:5780798|PMID:21308776) MGI PMID:21308776 MGI:5780798 NCBI chrNW_004955627:37,886...43,730
Ensembl chrNW_004955627:38,128...43,728
JBrowse link
G Duox2 dual oxidase 2 ISO (MGI:3712355|PMID:17440044) MGI PMID:17440044 MGI:3712355 NCBI chrNW_004955409:8,270,657...8,288,201
Ensembl chrNW_004955409:8,271,164...8,287,096
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO (MGI:2179907|PMID:11997520) MGI PMID:11997520 MGI:2179907 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO (MGI:3692802|PMID:17020410) MGI PMID:17020410 MGI:3692802 NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599
JBrowse link
G Fbxl15 F-box and leucine rich repeat protein 15 ISO PMID:21572392 UniProt PMID:21572392 RGD:8554771 NCBI chrNW_004955485:7,977,222...7,979,246
Ensembl chrNW_004955485:7,977,318...7,978,983
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:3043470|PMID:12756187) MGI PMID:12756187 MGI:3043470 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:4457789|PMID:20582225) BHF-UCL PMID:20582225 MGI:4457789 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase ISO (MGI:3663851|PMID:16964445) MGI PMID:16964445 MGI:3663851 NCBI chrNW_004955452:6,840,274...6,863,460
Ensembl chrNW_004955452:6,841,802...6,863,542
JBrowse link
G Gla galactosidase alpha NOT ISO (MGI:3692334|PMID:16697974) MGI PMID:16697974 MGI:3692334 NCBI chrNW_004955503:7,526,077...7,535,817
Ensembl chrNW_004955503:7,521,930...7,535,817
JBrowse link
G Gpc3 glypican 3 ISO (MGI:3612305|PMID:15936336) MGI PMID:15936336 MGI:3612305 NCBI chrNW_004955473:969,627...1,431,706
Ensembl chrNW_004955473:969,800...1,431,483
JBrowse link
G Gpnmb glycoprotein nmb ISO RGD PMID:11746512 RGD:632991 NCBI chrNW_004955410:25,554,279...25,583,368
Ensembl chrNW_004955410:25,553,973...25,582,500
JBrowse link
G Ibsp integrin binding sialoprotein ISO (MGI:5614132|PMID:25464126) MGI PMID:25464126 MGI:5614132 NCBI chrNW_004955474:2,074,659...2,086,289
Ensembl chrNW_004955474:2,074,659...2,086,289
JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase ISO (MGI:5500993|PMID:23686339) MGI PMID:23686339 MGI:5500993 NCBI chrNW_004955486:6,280,838...6,289,584
Ensembl chrNW_004955486:6,280,125...6,289,584
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 ISO (PMID:24519609)
(MGI:4359156|PMID:18442316), (MGI:5607401|PMID:20838829)
UniProtKB
MGI
PMID:18442316, PMID:20838829, PMID:24519609 MGI:4359156, MGI:5607401 NCBI chrNW_004955476:11,745,585...11,747,006
Ensembl chrNW_004955476:11,745,585...11,747,006
JBrowse link
G Klf10 Kruppel like factor 10 ISO (MGI:3528531|PMID:15657444) MGI PMID:15657444 MGI:3528531 NCBI chrNW_004955417:27,165,146...27,168,604
Ensembl chrNW_004955417:27,164,839...27,168,604
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:4360132|PMID:19605502) UniProt PMID:19605502 MGI:4360132 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ISO (PMID:17023519) BHF-UCL PMID:17023519 NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001
JBrowse link
G Lox lysyl oxidase ISO (MGI:5603515|PMID:19458888) MGI PMID:19458888 MGI:5603515 NCBI chrNW_004955521:178,290...193,926
Ensembl chrNW_004955521:185,792...193,926
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO (MGI:3513736|PMID:15563592)
(MGI:3771509|PMID:17987127)
MGI
UniProt
PMID:15563592, PMID:17987127 MGI:3513736, MGI:3771509 NCBI chrNW_004955412:6,106,994...6,118,760
Ensembl chrNW_004955412:6,106,994...6,118,760
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 ISO (MGI:5317250|PMID:21406566) MGI PMID:21406566 MGI:5317250 NCBI chrNW_004955540:3,204,357...3,346,026
Ensembl chrNW_004955540:3,204,367...3,346,026
JBrowse link
G Phex phosphate regulating endopeptidase homolog X-linked ISO (MGI:3851320|PMID:15843468) MGI PMID:15843468 MGI:3851320 NCBI chrNW_004955509:2,357,263...2,546,802
Ensembl chrNW_004955509:2,357,263...2,546,802
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic ISO (MGI:5013998|PMID:21553379) MGI PMID:21553379 MGI:5013998 NCBI chrNW_004955441:9,462,530...9,471,446
Ensembl chrNW_004955441:9,462,530...9,471,446
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171
JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO (MGI:2153596|PMID:11606467), (MGI:3624906|PMID:9832460) MGI PMID:9832460, PMID:11606467 MGI:2153596, MGI:3624906 NCBI chrNW_004955420:25,274,269...25,291,984
Ensembl chrNW_004955420:25,273,431...25,296,471
JBrowse link
G Pthlh parathyroid hormone like hormone NOT ISO (MGI:2153596|PMID:11606467) MGI PMID:11606467 MGI:2153596 NCBI chrNW_004955505:6,834,533...6,846,909
Ensembl chrNW_004955505:6,834,533...6,847,335
JBrowse link
G Ptn pleiotrophin ISO (MGI:2429445|PMID:12413943) MGI PMID:12413943 MGI:2429445 NCBI chrNW_004955494:5,580,264...5,681,848
Ensembl chrNW_004955494:5,580,422...5,684,190
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:23337931 RGD:11537369 NCBI chrNW_004955515:313,612...554,751
Ensembl chrNW_004955515:313,604...553,774
JBrowse link
G Rspo2 R-spondin 2 ISO (MGI:3850932|PMID:19213727) MGI PMID:19213727 MGI:3850932 NCBI chrNW_004955417:30,643,554...30,704,497
Ensembl chrNW_004955417:30,643,554...30,704,497
JBrowse link
G Sbds SBDS ribosome maturation factor ISO (PMID:17920346) UniProtKB PMID:17920346 NCBI chrNW_004955456:8,773,917...8,782,427 JBrowse link
G Sbno2 strawberry notch homolog 2 ISO (MGI:5522615|PMID:23980096) MGI PMID:23980096 MGI:5522615 NCBI chrNW_004955495:6,709,190...6,770,816
Ensembl chrNW_004955495:6,729,205...6,772,180
JBrowse link
G Slc24a3 solute carrier family 24 member 3 ISO (MGI:6104227|PMID:28602864) ARUK-UCL PMID:28602864 MGI:6104227 NCBI chrNW_004955415:27,477,801...27,930,108
Ensembl chrNW_004955415:27,477,819...27,928,383
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO (MGI:5584216|PMID:24585429)
(MGI:5293259|PMID:21788370)
MGI PMID:21788370, PMID:24585429 MGI:5293259, MGI:5584216 NCBI chrNW_004955484:8,207,686...8,298,164
Ensembl chrNW_004955484:8,272,572...8,298,144
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (MGI:3850932|PMID:19213727) MGI PMID:19213727 MGI:3850932 NCBI chrNW_004955431:18,020,309...18,207,926
Ensembl chrNW_004955431:18,020,409...18,209,134
JBrowse link
G Tmem38b transmembrane protein 38B ISO (MGI:6141091|PMID:27188440) MGI PMID:27188440 MGI:6141091 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
G Wnt11 Wnt family member 11 ISO (MGI:3850932|PMID:19213727) MGI PMID:19213727 MGI:3850932 NCBI chrNW_004955414:15,674,478...15,694,758
Ensembl chrNW_004955414:15,674,940...15,694,883
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO (MGI:5500993|PMID:23686339) MGI PMID:23686339 MGI:5500993 NCBI chrNW_004955537:82,724...134,609
Ensembl chrNW_004955537:81,920...134,609
JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO (MGI:5486117|PMID:22936354) MGI PMID:22936354 MGI:5486117 NCBI chrNW_004955500:4,462,314...4,652,634
Ensembl chrNW_004955500:4,462,524...4,652,782
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO (PMID:16433617) BHF-UCL PMID:16433617 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Ccdc154 coiled-coil domain containing 154 ISO (MGI:5697796|PMID:20121924) MGI PMID:20121924 MGI:5697796 NCBI chrNW_004955442:15,792,593...15,800,410
Ensembl chrNW_004955442:15,793,049...15,800,364
JBrowse link
G Ift80 intraflagellar transport 80 ISO (MGI:5807019|PMID:26996322) MGI PMID:26996322 MGI:5807019 NCBI chrNW_004955448:10,808,940...10,819,655 JBrowse link
G Igf1 insulin like growth factor 1 ISO (PMID:16433617) BHF-UCL PMID:16433617 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
G Lep leptin ISO RGD PMID:21353474 RGD:5128507 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ISO (MGI:5008224|PMID:21272676) MGI PMID:21272676 MGI:5008224 NCBI chrNW_004955451:12,232,465...12,240,864
Ensembl chrNW_004955451:12,234,692...12,242,721
JBrowse link
G Snx10 sorting nexin 10 ISO (MGI:5688814|PMID:25811986) MGI PMID:25811986 MGI:5688814 NCBI chrNW_004955410:28,137,426...28,178,814 JBrowse link
cementum mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated ISO RGD PMID:17043865 RGD:2316162 NCBI chrNW_004955452:1,820,212...1,873,877
Ensembl chrNW_004955452:1,820,174...1,874,226
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 ISO (PMID:25263524) UniProtKB PMID:25263524 NCBI chrNW_004955429:10,394,046...10,406,945
Ensembl chrNW_004955429:10,384,708...10,406,945
JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:5469811|PMID:23174213) MGI PMID:23174213 MGI:5469811 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003
JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin X-linked ISO (PMID:1916828)
(PMID:21653221)
BHF-UCL
CAFA
PMID:1916828, PMID:21653221 NCBI chrNW_004955544:1,974,889...1,979,063
Ensembl chrNW_004955544:1,969,216...1,979,063
JBrowse link
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 ISO (MGI:5559016|PMID:24339795) MGI PMID:24339795 MGI:5559016 NCBI chrNW_004955470:4,131,348...4,177,172
Ensembl chrNW_004955470:4,131,348...4,177,172
JBrowse link
G Fam20a FAM20A golgi associated secretory pathway pseudokinase ISO (PMID:21549343), (PMID:21990045), (PMID:23468644)
(MGI:5432245|PMID:22732358)
UniProtKB
MGI
PMID:21549343, PMID:21990045, PMID:22732358, PMID:23468644 MGI:5432245 NCBI chrNW_004955478:4,182,568...4,236,819
Ensembl chrNW_004955478:4,182,568...4,236,819
JBrowse link
G Fam20c FAM20C golgi associated secretory pathway kinase ISO (MGI:5432245|PMID:22732358) MGI PMID:22732358 MGI:5432245 NCBI chrNW_004955460:8,142,325...8,192,044
Ensembl chrNW_004955460:8,143,824...8,193,825
JBrowse link
G Foxo1 forkhead box O1 ISO RGD PMID:25183529 RGD:10044263 NCBI chrNW_004955431:5,797,359...5,890,758 JBrowse link
G Itgb6 integrin subunit beta 6 ISO (MGI:5507902|PMID:23264742) MGI PMID:23264742 MGI:5507902 NCBI chrNW_004955449:13,387,013...13,520,879
Ensembl chrNW_004955449:13,448,084...13,520,879
JBrowse link
G Msx2 msh homeobox 2 ISO (MGI:1355063|PMID:10742104) MGI PMID:10742104 MGI:1355063 NCBI chrNW_004955408:27,323,405...27,329,484
Ensembl chrNW_004955408:27,323,360...27,329,755
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO (MGI:3814115|PMID:18703497) MGI PMID:18703497 MGI:3814115 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (MGI:3843118|PMID:19320717) MGI PMID:19320717 MGI:3843118 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Stim1 stromal interaction molecule 1 ISO (PMID:24621671) UniProtKB PMID:24621671 NCBI chrNW_004955414:19,652,990...19,849,353
Ensembl chrNW_004955414:19,652,990...19,847,964
JBrowse link
G Tbx1 T-box transcription factor 1 ISO (MGI:3848106|PMID:19233155) MGI PMID:19233155 MGI:3848106 NCBI chrNW_004955442:18,320,674...18,327,062
Ensembl chrNW_004955442:18,319,762...18,325,337
JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:5469811|PMID:23174213) MGI PMID:23174213 MGI:5469811 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003
JBrowse link
G Wdr72 WD repeat domain 72 ISO (MGI:5605934|PMID:25008349)
(MGI:5906533|PMID:26247047)
MGI PMID:25008349, PMID:26247047 MGI:5605934, MGI:5906533 NCBI chrNW_004955409:1,451,506...1,631,976
Ensembl chrNW_004955409:1,467,732...1,674,042
JBrowse link
negative regulation of biomineral tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas6 growth arrest specific 6 ISO (PMID:20048160) UniProtKB PMID:20048160 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 ISO (MGI:6158746|PMID:22110751) BHF-UCL PMID:22110751 MGI:6158746 NCBI chrNW_004955444:1,498,444...1,502,099
Ensembl chrNW_004955444:1,498,675...1,500,945
JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 ISO (MGI:6158746|PMID:22110751) BHF-UCL PMID:22110751 MGI:6158746 NCBI chrNW_004955436:7,060,930...7,070,610
Ensembl chrNW_004955436:7,060,930...7,070,030
JBrowse link
G Nos3 nitric oxide synthase 3 ISO (MGI:6158885|PMID:23583836) BHF-UCL PMID:23583836 MGI:6158885 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:6158728|PMID:26491108)
(MGI:6158885|PMID:23583836)
BHF-UCL PMID:23583836, PMID:26491108 MGI:6158728, MGI:6158885 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 ISO (PMID:26634652) BHF-UCL PMID:26634652 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 ISO (PMID:26634652) BHF-UCL PMID:26634652 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:22110751)
(MGI:4947506|PMID:20056916)
BHF-UCL
UniProt
PMID:20056916, PMID:22110751 MGI:4947506 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:26634652)
(MGI:5921830|PMID:26634652)
BHF-UCL PMID:26634652 MGI:5921830 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
negative regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahsg alpha 2-HS glycoprotein ISO (MGI:3687916|PMID:12556469) RGD
UniProt
PMID:8702833, PMID:12556469 MGI:3687916, RGD:1626074 NCBI chrNW_004955420:21,071,111...21,078,397
Ensembl chrNW_004955420:21,069,681...21,078,298
JBrowse link
G Bcor BCL6 corepressor ISO (PMID:19578371) UniProtKB PMID:19578371 NCBI chrNW_004955566:1,412,540...1,510,339
Ensembl chrNW_004955566:1,412,540...1,457,329
JBrowse link
G Ecm1 extracellular matrix protein 1 ISO (PMID:11165938) UniProtKB PMID:11165938 NCBI chrNW_004955413:293,295...299,293
Ensembl chrNW_004955413:290,363...299,130
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO (MGI:5607146|PMID:25479107), (MGI:6220772|PMID:30111653), (MGI:6294341|PMID:22510396) UniProt PMID:22510396, PMID:25479107, PMID:30111653 MGI:5607146, MGI:6220772, MGI:6294341 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO (PMID:18282132) UniProtKB PMID:18282132 NCBI chrNW_004955413:2,182,459...2,192,279
Ensembl chrNW_004955413:2,182,459...2,192,279
JBrowse link
G Gata1 GATA binding protein 1 ISO (MGI:3653541|PMID:15005853) MGI PMID:15005853 MGI:3653541 NCBI chrNW_004955543:334,581...342,042
Ensembl chrNW_004955543:334,061...342,061
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) BHF-UCL PMID:15539560 NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (MGI:3777866|PMID:17181398) MGI PMID:17181398 MGI:3777866 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO (MGI:2178869|PMID:11790802) MGI PMID:11790802 MGI:2178869 NCBI chrNW_004955422:19,714,161...19,730,344
Ensembl chrNW_004955422:19,714,627...19,729,855
JBrowse link
G Mepe matrix extracellular phosphoglycoprotein ISO (MGI:2448336|PMID:12421822), (MGI:3851320|PMID:15843468)
(MGI:5431257|PMID:22766095)
MGI PMID:12421822, PMID:15843468, PMID:22766095 MGI:2448336, MGI:3851320, MGI:5431257 NCBI chrNW_004955474:2,048,883...2,064,515 JBrowse link
G Nfe2 nuclear factor, erythroid 2 ISO (MGI:3653541|PMID:15005853) MGI PMID:15005853 MGI:3653541 NCBI chrNW_004955458:1,541,765...1,552,323 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO (MGI:3713957|PMID:17537919) UniProt PMID:17537919 MGI:3713957 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:2135696|PMID:11371614) MGI PMID:11371614 MGI:2135696 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Srgn serglycin ISO (PMID:16870619) UniProtKB PMID:16870619 NCBI chrNW_004955437:21,954,837...21,966,552
Ensembl chrNW_004955437:21,951,732...21,965,581
JBrowse link
G Trpm4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chrNW_004955559:1,539,036...1,581,800
Ensembl chrNW_004955559:1,546,365...1,581,712
JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) BHF-UCL PMID:15539560 NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
JBrowse link
G LOC102011120 filamin-interacting protein FAM101A ISO (MGI:5570967|PMID:24436304) MGI PMID:24436304 MGI:5570967 NCBI chrNW_004955482:5,034,075...5,044,162
Ensembl chrNW_004955482:5,033,914...5,042,790
JBrowse link
G Pth parathyroid hormone ISO PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117
JBrowse link
G Rflnb refilin B ISO (MGI:5570967|PMID:24436304) MGI PMID:24436304 MGI:5570967 NCBI chrNW_004955481:2,102,576...2,107,947
Ensembl chrNW_004955481:2,102,586...2,107,967
JBrowse link
negative regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspn asporin ISO (MGI:3722035|PMID:17522060) UniProt PMID:17522060 MGI:3722035 NCBI chrNW_004955515:5,322,074...5,345,715
Ensembl chrNW_004955515:5,321,943...5,345,894
JBrowse link
G Bcor BCL6 corepressor ISO (PMID:19578371) UniProtKB PMID:19578371 NCBI chrNW_004955566:1,412,540...1,510,339
Ensembl chrNW_004955566:1,412,540...1,457,329
JBrowse link
otolith mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:1275896 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Oc90 otoconin 90 ISO (MGI:5896790|PMID:21655225), (MGI:6189500|PMID:24748133) UniProt PMID:21655225, PMID:24748133 MGI:5896790, MGI:6189500 NCBI chrNW_004955461:6,697,930...6,729,764 JBrowse link
G Otol1 otolin 1 ISO (MGI:5896790|PMID:21655225), (MGI:6189500|PMID:24748133), (MGI:6189669|PMID:29076638) UniProt PMID:21655225, PMID:24748133, PMID:29076638 MGI:5896790, MGI:6189500, MGI:6189669 NCBI chrNW_004955448:11,868,993...11,927,595
Ensembl chrNW_004955448:11,868,993...11,927,595
JBrowse link
positive regulation of biomineral tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amtn amelotin ISO (PMID:25407797) UniProtKB PMID:25407797 NCBI chrNW_004955447:2,422,189...2,433,633
Ensembl chrNW_004955447:2,423,136...2,433,150
JBrowse link
G Atf4 activating transcription factor 4 ISO (MGI:5812283|PMID:27812542) MGI PMID:27812542 MGI:5812283 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Cebpb CCAAT enhancer binding protein beta ISO (PMID:27812542) MGI PMID:27812542 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Fbxo5 F-box protein 5 ISO (PMID:29850565) UniProt PMID:29850565 NCBI chrNW_004955439:8,830,658...8,843,653
Ensembl chrNW_004955439:8,830,975...8,843,828
JBrowse link
G Odaph odontogenesis associated phosphoprotein ISO (PMID:22901946) UniProtKB PMID:22901946 NCBI chrNW_004955474:1,502,798...1,509,307 JBrowse link
positive regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694
JBrowse link
G Acvr2a activin A receptor type 2A ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955440:13,849,926...13,931,374
Ensembl chrNW_004955440:13,849,926...13,931,374
JBrowse link
G Acvr2b activin A receptor type 2B ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955427:25,438,652...25,467,360
Ensembl chrNW_004955427:25,438,652...25,467,360
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (MGI:6211994|PMID:22419726) UniProt PMID:22419726 MGI:6211994 NCBI chrNW_004955418:20,603,323...21,039,891 JBrowse link
G Adrb2 adrenoceptor beta 2 ISO (MGI:3575849|PMID:15724149) MGI PMID:15724149 MGI:3575849 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980
JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISO (MGI:6393219|PMID:24906289) UniProt PMID:24906289 MGI:6393219 NCBI chrNW_004955546:2,495,226...2,550,909
Ensembl chrNW_004955546:2,494,819...2,550,909
JBrowse link
G Ano6 anoctamin 6 ISO (PMID:25589784)
(MGI:5634871|PMID:25589784)
UniProtKB
UniProt
PMID:25589784 MGI:5634871 NCBI chrNW_004955500:4,462,314...4,652,634
Ensembl chrNW_004955500:4,462,524...4,652,782
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISO (MGI:5780494|PMID:26392310) UniProt PMID:26392310 MGI:5780494 NCBI chrNW_004955405:26,872,379...26,932,270
Ensembl chrNW_004955405:26,872,379...26,932,703
JBrowse link
G Atraid all-trans retinoic acid induced differentiation factor ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004955469:9,194,656...9,203,292 JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO (PMID:18436533), (PMID:20576608)
(MGI:5009350|PMID:20675382)
BHF-UCL PMID:18436533, PMID:20576608, PMID:20675382 MGI:5009350 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (PMID:14749725), (PMID:18436533) UniProtKB
RGD
PMID:14749725, PMID:15352071, PMID:18436533 RGD:9068399 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:18436533) BHF-UCL PMID:18436533 NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
JBrowse link
G Ccn1 cellular communication network factor 1 ISO (PMID:20675382) BHF-UCL PMID:20675382 NCBI chrNW_004955423:8,416,498...8,419,029
Ensembl chrNW_004955423:8,413,725...8,419,166
JBrowse link
G Cd276 CD276 molecule ISO (MGI:3052626|PMID:15317945) MGI PMID:15317945 MGI:3052626 NCBI chrNW_004955450:3,884,437...3,896,416 JBrowse link
G Fam20c FAM20C golgi associated secretory pathway kinase ISO (MGI:3715055|PMID:17369251), (MGI:5427766|PMID:22615579) MGI PMID:17369251, PMID:22615579 MGI:3715055, MGI:5427766 NCBI chrNW_004955460:8,142,325...8,192,044
Ensembl chrNW_004955460:8,143,824...8,193,825
JBrowse link
G Fbn2 fibrillin 2 ISO (MGI:4836762|PMID:20855508) BHF-UCL PMID:20855508 MGI:4836762 NCBI chrNW_004955415:1,307,553...1,535,435
Ensembl chrNW_004955415:1,309,077...1,537,052
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:4437389|PMID:20053668) MGI PMID:20053668 MGI:4437389 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Fzd9 frizzled class receptor 9 ISO (MGI:4943600|PMID:21402791) UniProt PMID:21402791 MGI:4943600 NCBI chrNW_004955456:14,245,994...14,247,551
Ensembl chrNW_004955456:14,246,324...14,247,550
JBrowse link
G Gpm6b glycoprotein M6B ISO (PMID:21638316) UniProtKB PMID:21638316 NCBI chrNW_004955519:4,287,203...4,432,188
Ensembl chrNW_004955519:4,287,026...4,432,188
JBrowse link
G Isg15 ISG15 ubiquitin like modifier ISO (MGI:4943600|PMID:21402791) UniProt PMID:21402791 MGI:4943600 NCBI chrNW_004955486:9,706,878...9,707,876
Ensembl chrNW_004955486:9,706,703...9,707,949
JBrowse link
G Kl klotho ISO (PMID:12110410) UniProtKB PMID:12110410 NCBI chrNW_004955431:12,782,913...12,833,215
Ensembl chrNW_004955431:12,782,846...12,833,215
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:5285459|PMID:21652706) UniProt PMID:21652706 MGI:5285459 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 ISO (MGI:5008683|PMID:21606205) MGI PMID:21606205 MGI:5008683 NCBI chrNW_004955520:1,853,145...1,890,338
Ensembl chrNW_004955520:1,850,942...1,890,390
JBrowse link
G Nell1 neural EGFL like 1 ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004955476:1,445,234...2,236,954
Ensembl chrNW_004955476:1,445,353...2,233,146
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chrNW_004955417:14,502,450...14,510,015
Ensembl chrNW_004955417:14,502,451...14,510,160
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:2667237|PMID:12677010), (MGI:3797675|PMID:18519738) MGI PMID:12677010, PMID:18519738 MGI:2667237, MGI:3797675 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic ISO (MGI:3813934|PMID:19097194) UniProt PMID:19097194 MGI:3813934 NCBI chrNW_004955441:9,462,530...9,471,446
Ensembl chrNW_004955441:9,462,530...9,471,446
JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:10807497 RGD:1642474 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
G Pth parathyroid hormone ISO (PMID:17696759) UniProtKB
RGD
PMID:15758479, PMID:17696759, PMID:22445539 RGD:7207452, RGD:7242906 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117
JBrowse link
G Ptn pleiotrophin ISO (MGI:6294181|PMID:19442624) UniProt PMID:19442624 MGI:6294181 NCBI chrNW_004955494:5,580,264...5,681,848
Ensembl chrNW_004955494:5,580,422...5,684,190
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO (PMID:25589784) UniProtKB PMID:25589784 NCBI chrNW_004955441:7,653,107...8,037,784
Ensembl chrNW_004955441:7,656,031...7,957,640
JBrowse link
G Smad3 SMAD family member 3 ISO rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity RGD PMID:12096832 RGD:727387 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (PMID:19578371) UniProtKB PMID:19578371 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:17401695) BHF-UCL PMID:17401695 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfb3 transforming growth factor beta 3 ISO (PMID:17401695) BHF-UCL PMID:17401695 NCBI chrNW_004955438:33,129...55,180
Ensembl chrNW_004955438:29,415...55,180
JBrowse link
G Tmem119 transmembrane protein 119 ISO (PMID:20025746)
(MGI:4418582|PMID:20025746), (MGI:5700277|PMID:26207632)
UniProtKB
UniProt
PMID:20025746, PMID:26207632 MGI:4418582, MGI:5700277 NCBI chrNW_004955455:9,856,443...9,863,100
Ensembl chrNW_004955455:9,856,443...9,863,100
JBrowse link
G Wnt10b Wnt family member 10B ISO (MGI:3574150|PMID:15728361) MGI PMID:15728361 MGI:3574150 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309
JBrowse link
G Wnt4 Wnt family member 4 ISO (PMID:17720811) BHF-UCL PMID:17720811 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:5291888|PMID:21784188) UniProt PMID:21784188 MGI:5291888 NCBI chrNW_004955422:18,799,372...18,812,458
Ensembl chrNW_004955422:18,799,372...18,812,711
JBrowse link
G Asxl2 ASXL transcriptional regulator 2 ISO (MGI:5514358|PMID:21490954) MGI PMID:21490954 MGI:5514358 NCBI chrNW_004955469:7,786,030...7,923,739
Ensembl chrNW_004955469:7,786,154...7,923,500
JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amtn amelotin ISO (MGI:5613837|PMID:25407797) UniProt PMID:25407797 MGI:5613837 NCBI chrNW_004955447:2,422,189...2,433,633
Ensembl chrNW_004955447:2,423,136...2,433,150
JBrowse link
G Dspp dentin sialophosphoprotein ISO (MGI:3603472|PMID:16014627) MGI PMID:16014627 MGI:3603472 NCBI chrNW_004955474:2,254,842...2,259,303 JBrowse link
G Enam enamelin ISO (MGI:5647983|PMID:24603688) MGI PMID:24603688 MGI:5647983 NCBI chrNW_004955447:2,331,251...2,345,459
Ensembl chrNW_004955447:2,331,251...2,346,110
JBrowse link
G Odaph odontogenesis associated phosphoprotein ISO (PMID:22901946) UniProtKB PMID:22901946 NCBI chrNW_004955474:1,502,798...1,509,307 JBrowse link
positive regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha ISO (PMID:19578371) UniProtKB PMID:19578371 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Wnt6 Wnt family member 6 ISO (PMID:20113781) BHF-UCL PMID:20113781 NCBI chrNW_004955453:14,547,427...14,560,001
Ensembl chrNW_004955453:14,545,700...14,560,976
JBrowse link
regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankh ANKH inorganic pyrophosphate transport regulator ISO (MGI:1860991|PMID:10894769), (MGI:55055|PMID:7276519) MGI PMID:7276519, PMID:10894769 MGI:1860991, MGI:55055 NCBI chrNW_004955426:3,992,671...4,130,754
Ensembl chrNW_004955426:3,992,671...4,130,754
JBrowse link
G Bmp2k BMP2 inducible kinase ISO (MGI:2153232|PMID:11500515) MGI PMID:11500515 MGI:2153232 NCBI chrNW_004955433:3,207,512...3,327,688
Ensembl chrNW_004955433:3,207,512...3,327,688
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (PMID:20564243) UniProtKB PMID:20564243 NCBI chrNW_004955462:13,578,638...13,644,834
Ensembl chrNW_004955462:13,584,724...13,642,968
JBrowse link
G Ecm1 extracellular matrix protein 1 ISO (MGI:4452294|PMID:20138147) MGI PMID:20138147 MGI:4452294 NCBI chrNW_004955413:293,295...299,293
Ensembl chrNW_004955413:290,363...299,130
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO (MGI:3510566|PMID:15579309) MGI PMID:15579309 MGI:3510566 NCBI chrNW_004955413:2,182,459...2,192,279
Ensembl chrNW_004955413:2,182,459...2,192,279
JBrowse link
G Gja1 gap junction protein alpha 1 ISO (MGI:5317265|PMID:21346198) MGI PMID:21346198 MGI:5317265 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095
JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ISO (PMID:9415400) BHF-UCL PMID:9415400 NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001
JBrowse link
G Matn1 matrilin 1 ISO (MGI:3655339|PMID:16877353) MGI PMID:16877353 MGI:3655339 NCBI chrNW_004955452:9,317,726...9,325,803
Ensembl chrNW_004955452:9,317,716...9,325,812
JBrowse link
G Nbr1 NBR1 autophagy cargo receptor ISO (MGI:4818844|PMID:20616007) BHF-UCL PMID:20616007 MGI:4818844 NCBI chrNW_004955451:16,871,091...16,896,090
Ensembl chrNW_004955451:16,871,586...16,895,179
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 ISO (MGI:3839226|PMID:19204730) UniProt PMID:19204730 MGI:3839226 NCBI chrNW_004955435:5,880,266...5,882,823
Ensembl chrNW_004955435:5,880,288...5,881,436
JBrowse link
G Sgms2 sphingomyelin synthase 2 ISO (PMID:30779713) UniProt PMID:30779713 NCBI chrNW_004955496:1,909,347...1,955,004
Ensembl chrNW_004955496:1,905,517...1,947,009
JBrowse link
G Suv39h1 suppressor of variegation 3-9 homolog 1 ISO (MGI:5913114|PMID:23695662) MGI PMID:23695662 MGI:5913114 NCBI chrNW_004955543:258,479...271,128
Ensembl chrNW_004955543:258,479...272,473
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:19597909) BHF-UCL PMID:19597909 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
G Txlng taxilin gamma ISO (MGI:3587454|PMID:15911876), (MGI:5306578|PMID:19016261) UniProt PMID:15911876, PMID:19016261 MGI:3587454, MGI:5306578 NCBI chrNW_004955519:1,484,782...1,536,278
Ensembl chrNW_004955519:1,484,782...1,536,659
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO (MGI:5913114|PMID:23695662) MGI PMID:23695662 MGI:5913114 NCBI chrNW_004955537:82,724...134,609
Ensembl chrNW_004955537:81,920...134,609
JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease III ISO (MGI:4453947|PMID:20102707) MGI PMID:20102707 MGI:4453947 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 ISO (MGI:3603472|PMID:16014627) MGI PMID:16014627 MGI:3603472 NCBI chrNW_004955474:2,188,090...2,200,284 JBrowse link
tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin X-linked ISO (PMID:1483698)
(MGI:2149207|PMID:11406633)
BHF-UCL PMID:1483698, PMID:11406633 MGI:2149207 NCBI chrNW_004955544:1,974,889...1,979,063
Ensembl chrNW_004955544:1,969,216...1,979,063
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO (PMID:17118335) UniProtKB PMID:17118335 NCBI chrNW_004955451:11,468,156...11,484,410
Ensembl chrNW_004955451:11,468,290...11,483,073
JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats ISO (PMID:27736875) UniProt PMID:27736875 NCBI chrNW_004955407:41,513,538...41,566,931
Ensembl chrNW_004955407:41,513,829...41,656,564
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    biomineralization 157
      biomineral tissue development 155
        bone mineralization + 119
        chitin-based cuticle sclerotization by biomineralization 0
        negative regulation of biomineral tissue development + 27
        otolith mineralization + 3
        positive regulation of biomineral tissue development + 53
        regulation of biomineral tissue development + 93
        shell calcification + 0
        tooth mineralization + 27
Path 2
Term Annotations click to browse term
  biological_process 11892
    developmental process 5616
      anatomical structure development 5254
        multicellular organism development 4812
          system development 4532
            animal organ development 3490
              biomineral tissue development 155
                bone mineralization + 119
                chitin-based cuticle sclerotization by biomineralization 0
                negative regulation of biomineral tissue development + 27
                otolith mineralization + 3
                positive regulation of biomineral tissue development + 53
                regulation of biomineral tissue development + 93
                shell calcification + 0
                tooth mineralization + 27
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.