Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:pseudopodium assembly
go back to main search page
Accession:GO:0031269 term browser browse the term
Definition:The assembly of a pseudopodium by rearrangement of the actin cytoskeleton and overlying membrane.
Synonyms:exact_synonym: pseudopodium extension
 related_synonym: pseudopodium formation


show annotations for term's descendants           Sort by:
 
pseudopodium assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 IDA PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 ISS
ISO
GO_REF:0000024
(MGI:4366584|PMID:19737524)
UniProt
RGD
PMID:19737524 GO_REF:0000024, MGI:4366584 NCBI chr13:48,065,280...48,286,888
Ensembl chr13:48,068,158...48,286,720
JBrowse link
positive regulation of pseudopodium assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO
IEA
(PMID:17192415)
GO_REF:0000107
RGD
Ensembl
PMID:17192415 GO_REF:0000107 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 ISO (PMID:11242036) RGD PMID:11242036 NCBI chr 5:58,197,678...58,198,782
Ensembl chr 5:58,197,680...58,198,782
JBrowse link
G Cdc42 cell division cycle 42 ISO (PMID:11035016) RGD PMID:11035016 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Cdc42ep1 CDC42 effector protein 1 ISO
IBA
(PMID:11035016)
PMID:21873635
RGD PMID:11035016, PMID:21873635 RGD:13792537 NCBI chr 7:120,063,256...120,071,154
Ensembl chr 7:120,067,379...120,071,440
JBrowse link
G Cdc42ep2 CDC42 effector protein 2 ISO
IBA
(PMID:11035016)
PMID:21873635
RGD PMID:11035016, PMID:21873635 RGD:13792537 NCBI chr 1:221,272,349...221,281,252
Ensembl chr 1:221,272,353...221,281,180
JBrowse link
G Cdc42ep3 CDC42 effector protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:1,922,500...1,942,972
Ensembl chr 6:1,922,500...1,942,972
JBrowse link
G Cdc42ep4 CDC42 effector protein 4 ISO
IBA
(PMID:11035016)
PMID:21873635
RGD PMID:11035016, PMID:21873635 RGD:13792537 NCBI chr10:102,244,680...102,269,272
Ensembl chr10:102,244,681...102,269,272
JBrowse link
G Cdc42ep5 CDC42 effector protein 5 ISO
IBA
(PMID:11035016)
PMID:21873635
RGD PMID:11035016, PMID:21873635 RGD:13792537 NCBI chr 1:73,717,207...73,719,600
Ensembl chr 1:73,719,005...73,719,529
JBrowse link
G F2rl1 F2R like trypsin receptor 1 ISS
ISO
GO_REF:0000024
(MGI:2673740|PMID:12821670)
UniProt
RGD
PMID:12821670 GO_REF:0000024, MGI:2673740 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP postnatal testicular germ cells RGD PMID:9283007 RGD:2292525 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G LOC691418 hypothetical protein LOC691418 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:110,980,265...110,983,932
Ensembl chr 3:110,982,553...110,983,098
JBrowse link
G Washc1 WASH complex subunit 1 ISO (PMID:22114305) RGD PMID:22114305 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
regulation of lateral pseudopodium assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl41 kelch-like family member 41 IMP RGD PMID:10713668 RGD:634002 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular component organization or biogenesis 6789
        cellular component organization 6534
          cell projection organization 1730
            plasma membrane bounded cell projection organization 1692
              pseudopodium organization 17
                pseudopodium assembly 15
                  extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration 1
                  lateral pseudopodium assembly + 1
                  negative regulation of pseudopodium assembly + 0
                  positive regulation of pseudopodium assembly + 12
                  regulation of pseudopodium assembly + 13
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.