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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of cellular catabolic process
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Accession:GO:0031330 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.
Synonyms:exact_synonym: down regulation of cellular catabolic process;   downregulation of cellular catabolic process;   negative regulation of cellular breakdown;   negative regulation of cellular catabolism;   negative regulation of cellular degradation
 narrow_synonym: inhibition of cellular catabolic process


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3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 ISO
IBA
(PMID:22547059)
PMID:21873635
RGD PMID:22547059, PMID:21873635 RGD:13792537 NCBI chr13:109,505,021...109,520,976
Ensembl chr13:109,505,697...109,520,419
JBrowse link
G Boll boule homolog, RNA binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,836,517...61,975,640
Ensembl chr 9:64,480,031...64,573,660
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G Dazl deleted in azoospermia-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:12,633,983...12,651,017
Ensembl chr 9:12,633,990...12,650,938
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288, PMID:19029303, PMID:26489465, PMID:27616329, PMID:29180010 GO_REF:0000024, MGI:MGI:6105829 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO (MGI:MGI:5306322|PMID:12456657) RGD PMID:12456657 MGI:MGI:5306322
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G LOC108348134 protein boule-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:64,447,890...64,573,812
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G LOC681410 hypothetical protein LOC681410 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:6,909,166...6,912,145
Ensembl chr17:6,909,728...6,910,630
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288, PMID:15014438, PMID:20932473 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Rbm10 RNA binding motif protein 10 ISO
IEA
(MGI:MGI:4367529|PMID:19508861)
GO_REF:0000107
RGD
Ensembl
PMID:19508861 GO_REF:0000107, MGI:MGI:4367529 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978
JBrowse link
G Rbm38 RNA binding motif protein 38 ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:171,037,891...171,050,500
Ensembl chr 3:171,037,957...171,050,475
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Tirap TIR domain containing adaptor protein ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Zfp36 zinc finger protein 36 ISO
ISS
(PMID:15014438)
GO_REF:0000024
RGD
UniProt
PMID:15014438 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:19029303)
Ensembl
RGD
PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:19029303)
Ensembl
RGD
PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS
(PMID:19029303)
GO_REF:0000024
RGD
UniProt
PMID:19029303 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO (MGI:MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:MGI:3057047 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Axin2 axin 2 ISO
IEA
(PMID:17072303)
GO_REF:0000107
RGD
Ensembl
PMID:17072303 GO_REF:0000107 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Cirbp cold inducible RNA binding protein ISO
ISS
(PMID:11574538)
GO_REF:0000024
RGD
UniProt
PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:MGI:3589208 (MGI:MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:MGI:5439239 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:29,608,588...29,611,212
Ensembl chr18:29,608,588...29,611,212
JBrowse link
G E2f1 E2F transcription factor 1 ISO (PMID:15766563) RGD PMID:15766563 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285, PMID:32354837 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO
ISS
(PMID:19029303), (PMID:21613615), (PMID:31358969)
(MGI:MGI:3037407|PMID:14976220), (MGI:MGI:5287957|PMID:21613615), (MGI:MGI:5559905|PMID:24394384), (MGI:MGI:5922838|PMID:27609837)
GO_REF:0000024
RGD
UniProt
PMID:14976220, PMID:19029303, PMID:21613615, PMID:24394384, PMID:27609837, PMID:31358969 GO_REF:0000024, MGI:MGI:3037407, MGI:MGI:5287957, MGI:MGI:5559905, MGI:MGI:5922838 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Fus FUS RNA binding protein ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:199,412,805...199,426,705
Ensembl chr 1:199,412,834...199,426,702
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO
ISS
IEA
(PMID:12358785)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12358785 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IDA RGD PMID:15192077 RGD:1357938 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091, PMID:28673543 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO MGI:MGI:2179724 (MGI:MGI:2158083|PMID:11741878) RGD PMID:11741878 MGI:MGI:2158083 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110
JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO
IBA
(MGI:MGI:5770021|PMID:26742488)
PMID:21873635
RGD PMID:26742488, PMID:21873635 MGI:MGI:5770021, RGD:13792537 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Noct nocturnin ISO
ISS
(MGI:MGI:5308514|PMID:22073225)
GO_REF:0000024
RGD
UniProt
PMID:22073225 GO_REF:0000024, MGI:MGI:5308514 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869
JBrowse link
G Qk quaking IMP RGD PMID:16855020 RGD:10045995 NCBI chr 1:50,983,647...51,050,692 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
JBrowse link
G Rbm46 RNA binding motif protein 46 ISO (MGI:MGI:5644240|PMID:25397698) RGD PMID:25397698 MGI:MGI:5644240 NCBI chr 2:181,828,931...181,874,223
Ensembl chr 2:181,831,244...181,874,223
JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO
IEA
MGI:MGI:1857755 (MGI:MGI:85148|PMID:9009318)
GO_REF:0000107
RGD
Ensembl
PMID:9009318 GO_REF:0000107, MGI:MGI:85148 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:70,689,863...70,721,892
Ensembl chr10:70,689,863...70,721,892
JBrowse link
G Tent5a terminal nucleotidyltransferase 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:92,935,474...92,942,267
Ensembl chr 8:92,937,739...92,942,076
JBrowse link
G Tent5b terminal nucleotidyltransferase 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:151,692,068...151,699,381
Ensembl chr 5:151,692,108...151,700,246
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:MGI:5926094|PMID:28931820)
(PMID:28931820)
UniProt
RGD
PMID:28931820, PMID:21873635 GO_REF:0000024, MGI:MGI:5926094, RGD:13792537 NCBI chr 2:202,797,766...202,816,562
Ensembl chr 2:202,798,198...202,816,562
JBrowse link
G Tent5d terminal nucleotidyltransferase 5D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,911,641...78,994,467
Ensembl chr  X:78,991,223...78,992,735
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO
ISS
(PMID:18794151)
GO_REF:0000024
RGD
UniProt
PMID:18794151 GO_REF:0000024 NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263
JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vip vasoactive intestinal peptide ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582
JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS
(PMID:31358969)
GO_REF:0000024
RGD
UniProt
PMID:31358969 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
G Ybx2 Y box binding protein 2 ISO MGI:MGI:3576937 (MGI:MGI:3696301|PMID:17035640) RGD PMID:17035640 MGI:MGI:3696301 NCBI chr10:56,546,689...56,552,339
Ensembl chr10:56,546,710...56,551,863
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 ISO
IEA
(PMID:28525753)
GO_REF:0000107
RGD
Ensembl
PMID:28525753 GO_REF:0000107 NCBI chr10:61,626,595...61,682,947
Ensembl chr10:61,626,597...61,672,136
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha ISO (PMID:15572351)
MGI:MGI:2179456 (MGI:MGI:2182584|PMID:10601318), (MGI:MGI:3029597|PMID:14663139)
RGD PMID:10601318, PMID:14663139, PMID:15572351 MGI:MGI:2182584, MGI:MGI:3029597 NCBI chr 5:165,922,893...165,935,822
Ensembl chr 5:165,922,915...165,935,821
JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:166,409,460...166,430,291
Ensembl chr 5:166,409,461...166,430,254
JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:11,146,359...11,153,936
Ensembl chr10:11,146,359...11,153,936
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 ISO MGI:MGI:2683833 (MGI:MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:MGI:5888970 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Chmp4b charged multivesicular body protein 4B ISO (PMID:21975012) RGD PMID:21975012 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO (MGI:MGI:5543871|PMID:23918802) RGD PMID:23918802 MGI:MGI:5543871 NCBI chr20:4,576,033...4,592,980
Ensembl chr20:4,576,057...4,592,980
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 ISO
ISS
(PMID:25495476)
GO_REF:0000024
RGD
GO_Central
PMID:25495476 GO_REF:0000024 NCBI chr 8:39,305,128...39,350,270
Ensembl chr 8:39,305,128...39,350,270
JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 ISO
ISS
IEA
(PMID:25495476)
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:25495476 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:963,903...1,003,955
Ensembl chr 6:963,907...1,004,001
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO
IBA
(PMID:23916833)
PMID:21873635
RGD PMID:23916833, PMID:21873635 RGD:13792537 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Mtm1 myotubularin 1 ISO
IBA
MGI:MGI:2450997 (MGI:MGI:5510937|PMID:23695157)
PMID:21873635
RGD PMID:23695157, PMID:21873635 MGI:MGI:5510937, RGD:13792537 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISS
ISO
GO_REF:0000024
(PMID:20181828)
UniProt
RGD
PMID:20181828 GO_REF:0000024 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524
JBrowse link
G Phf23 PHD finger protein 23 ISO
IBA
ISS
(PMID:25484098)
PMID:21873635
GO_REF:0000024
RGD
GO_Central
PMID:25484098, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:56,605,078...56,609,236
Ensembl chr10:56,605,140...56,609,233
JBrowse link
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Scfd1 sec1 family domain containing 1 ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 6:72,124,408...72,202,703
Ensembl chr 6:72,124,417...72,202,713
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:200,076,079...200,096,861
Ensembl chr 2:200,076,054...200,098,076
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:47,019,326...47,026,465
Ensembl chr10:47,018,974...47,026,465
JBrowse link
G Tmem39a transmembrane protein 39a ISO
IBA
ISS
(PMID:31806350)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:31806350, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544
JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Phf23 PHD finger protein 23 ISO
IBA
ISS
(PMID:25484098)
PMID:21873635
GO_REF:0000024
RGD
GO_Central
PMID:25484098, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:56,605,078...56,609,236
Ensembl chr10:56,605,140...56,609,233
JBrowse link
G Rubcn rubicon autophagy regulator ISO
IBA
(PMID:21062745)
PMID:21873635
RGD PMID:21062745, PMID:21873635 RGD:13792537 NCBI chr11:71,150,506...71,199,254
Ensembl chr11:71,151,132...71,197,035
JBrowse link
G Tmem39a transmembrane protein 39a ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:31806350)
UniProt
RGD
PMID:31806350, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544
JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:23459205) RGD PMID:23459205 NCBI chr 2:187,915,701...187,931,035
Ensembl chr 2:187,915,751...187,931,035
JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A ISO (MGI:MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:MGI:5888970 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:18387192) RGD PMID:18387192 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO
IEA
(MGI:MGI:3796473|PMID:18281291)
GO_REF:0000107
RGD
Ensembl
PMID:18281291 GO_REF:0000107, MGI:MGI:3796473 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Becn1 beclin 1 ISO (MGI:MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:MGI:5888970 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Bmf Bcl2 modifying factor ISO
IBA
(PMID:23629966)
PMID:21873635
(MGI:MGI:5490676|PMID:23629966)
RGD PMID:23629966, PMID:21873635 MGI:MGI:5490676, RGD:13792537 NCBI chr 3:110,303,515...110,324,125
Ensembl chr 3:110,306,067...110,324,084
JBrowse link
G Cptp ceramide-1-phosphate transfer protein ISS
ISO
GO_REF:0000024
(PMID:29164996)
UniProt
RGD
PMID:29164996 GO_REF:0000024 NCBI chr 5:173,314,219...173,318,384
Ensembl chr 5:173,314,228...173,318,313
JBrowse link
G Dap death-associated protein ISO
IBA
(PMID:20537536)
PMID:21873635
RGD PMID:20537536, PMID:21873635 RGD:13792537 NCBI chr 2:84,275,884...84,328,998
Ensembl chr 2:84,275,884...84,328,998
JBrowse link
G Dapl1 death associated protein-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:45,538,408...45,559,281
Ensembl chr 3:45,538,797...45,559,331
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 2:243,819,616...243,853,987
Ensembl chr 2:243,820,661...243,852,631
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 1:175,883,362...175,895,510
Ensembl chr 1:175,883,363...175,895,510
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 NOT ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 5:156,343,663...156,564,037
Ensembl chr 5:156,396,695...156,564,037
JBrowse link
G Foxk1 forkhead box K1 ISO (PMID:25402684) RGD PMID:25402684 NCBI chr12:14,183,436...14,244,634
Ensembl chr12:14,180,029...14,244,316
JBrowse link
G Foxk2 forkhead box K2 ISO (MGI:MGI:5615527|PMID:25402684) RGD PMID:25402684 MGI:MGI:5615527 NCBI chr10:110,468,905...110,518,854
Ensembl chr10:110,469,290...110,518,848
JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:19901028 RGD:5131537 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Golga2 golgin A2 ISO (PMID:22735382) RGD PMID:22735382 NCBI chr 3:11,317,328...11,337,569
Ensembl chr 3:11,317,183...11,336,458
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 ISO MGI:MGI:3613033 (MGI:MGI:4461108|PMID:20041218) RGD PMID:20041218 MGI:MGI:4461108 NCBI chr 8:72,029,550...72,198,363
Ensembl chr 8:72,029,489...72,198,358
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20099302)
Ensembl
UniProt
RGD
PMID:20099302 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:93,112,781...93,130,135
Ensembl chr 9:93,112,805...93,125,014
JBrowse link
G Il10 interleukin 10 ISO (PMID:26962683) RGD PMID:26962683 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha ISO (PMID:26962683) RGD PMID:26962683 NCBI chr 8:49,558,062...49,573,891
Ensembl chr 8:49,560,035...49,573,742
JBrowse link
G Il3 interleukin 3 ISO (MGI:MGI:3575206|PMID:15680329) RGD PMID:15680329 MGI:MGI:3575206 NCBI chr10:39,620,535...39,622,973
Ensembl chr10:39,620,563...39,622,973
JBrowse link
G Kdm4a lysine demethylase 4A ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:136,967,650...137,014,402
Ensembl chr 5:136,967,650...137,014,430
JBrowse link
G Klhl22 kelch-like family member 22 ISS
ISO
GO_REF:0000024
(PMID:29769719)
UniProt
RGD
PMID:29769719 GO_REF:0000024 NCBI chr11:87,646,489...87,718,808
Ensembl chr11:87,677,966...87,718,826
JBrowse link
G Lep leptin ISO
ISS
(PMID:25060689)
GO_REF:0000024
(MGI:MGI:5705211|PMID:25060689)
RGD
UniProt
PMID:25060689 GO_REF:0000024, MGI:MGI:5705211 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Lepr leptin receptor ISO
IEA
ISS
(PMID:25060689)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25060689 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:120,503,475...120,682,281
Ensembl chr 5:120,564,645...120,682,221
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member ISO (PMID:24113155) RGD PMID:24113155 NCBI chr 2:197,786,212...197,788,992 JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mt3 metallothionein 3 ISO
ISS
(MGI:MGI:4881636|PMID:20544854)
GO_REF:0000024
RGD
UniProt
PMID:20544854 GO_REF:0000024, MGI:MGI:4881636 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
G Mtmr9 myotubularin related protein 9 ISO
IBA
UniProtKB:Q96EF0-1 (PMID:22647598)
PMID:21873635
RGD PMID:22647598, PMID:21873635 RGD:13792537 NCBI chr15:46,697,262...46,719,296
Ensembl chr15:46,693,383...46,719,252
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP
IBA
ISO
ISS
PMID:21873635
(PMID:22424946), (PMID:22576015), (PMID:30704899)
GO_REF:0000024
(MGI:MGI:5285135|PMID:21258367)
RGD
UniProt
PMID:21258367, PMID:22424946, PMID:22576015, PMID:30704899, PMID:24725502, PMID:21873635 GO_REF:0000024, MGI:MGI:5285135, RGD:10040964, RGD:13792537 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IMP RGD PMID:26601421 RGD:13781888 NCBI chr 6:52,122,085...52,156,473
Ensembl chr 6:52,122,085...52,156,472
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISS
ISO
IMP
GO_REF:0000024
(MGI:MGI:6283395|PMID:20181828)
(PMID:20181828)
UniProt
RGD
PMID:20181828, PMID:20181828 GO_REF:0000024, MGI:MGI:6283395, RGD:14390062 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524
JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO
IEA
(MGI:MGI:5888970|PMID:27994061)
GO_REF:0000107
RGD
Ensembl
PMID:27994061 GO_REF:0000107, MGI:MGI:5888970 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348
JBrowse link
G Rasip1 Ras interacting protein 1 ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:101,609,209...101,621,648
Ensembl chr 1:101,610,773...101,621,646
JBrowse link
G Rnf5 ring finger protein 5 ISO MGI:MGI:3775796 (MGI:MGI:5469257|PMID:23093945) RGD PMID:23093945 MGI:MGI:5469257 NCBI chr20:4,366,244...4,368,690
Ensembl chr20:4,366,246...4,368,693
JBrowse link
G Rraga Ras-related GTP binding A ISO
ISS
(PMID:25936802)
GO_REF:0000024
RGD
UniProt
PMID:25936802 GO_REF:0000024 NCBI chr 5:104,941,067...104,942,662
Ensembl chr 5:104,941,066...104,942,662
JBrowse link
G Rubcn rubicon autophagy regulator ISO (PMID:19270696) RGD PMID:19270696 NCBI chr11:71,150,506...71,199,254
Ensembl chr11:71,151,132...71,197,035
JBrowse link
G Sirt2 sirtuin 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20543840)
Ensembl
UniProt
RGD
PMID:20543840 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (PMID:26962683) RGD PMID:26962683 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Tbc1d14 TBC1 domain family, member 14 ISO
IEA
(PMID:22613832)
GO_REF:0000107
RGD
Ensembl
PMID:22613832 GO_REF:0000107 NCBI chr14:79,172,272...79,438,765
Ensembl chr14:79,205,466...79,438,764
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:MGI:5906931 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Washc1 WASH complex subunit 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5519172|PMID:23974797)
Ensembl
RGD
PMID:23974797 GO_REF:0000107, MGI:MGI:5519172 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
G Wdr6 WD repeat domain 6 ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 8:117,358,345...117,364,761
Ensembl chr 8:117,358,787...117,366,096
JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 ISO (PMID:23434374) RGD PMID:23434374 NCBI chr17:45,247,724...45,263,422
Ensembl chr17:45,247,776...45,263,418
JBrowse link
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Tspo translocator protein ISO (MGI:MGI:5689082|PMID:25470454)
(PMID:25470454)
RGD PMID:25470454 MGI:MGI:5689082 NCBI chr 7:124,460,358...124,470,610
Ensembl chr 7:124,460,358...124,470,609
JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atraid all-trans retinoic acid-induced differentiation factor ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO (PMID:15750306) RGD PMID:15750306 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16173922)
Ensembl
UniProt
RGD
PMID:16173922 GO_REF:0000024, GO_REF:0000107 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832
JBrowse link
G Dab2ip DAB2 interacting protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19903888)
Ensembl
UniProt
RGD
PMID:19903888 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G F13b coagulation factor XIII B chain ISO MGI:MGI:5645820 (MGI:MGI:5645809|PMID:18224415) RGD PMID:18224415 MGI:MGI:5645809 NCBI chr13:56,598,891...56,623,132
Ensembl chr13:56,598,957...56,623,124
JBrowse link
G Nell1 neural EGFL like 1 ISO
ISS
(PMID:21723284)
GO_REF:0000024
RGD
UniProt
PMID:21723284 GO_REF:0000024 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 5:59,080,290...59,088,777
Ensembl chr 5:59,080,765...59,088,523
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 1:247,688,778...247,784,219
Ensembl chr 1:247,688,789...247,781,875
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A ISO
NAS
ISS
(MGI:MGI:5700310|PMID:12505983)
GO_REF:0000024
UniProtKB:P10619 (PMID:12505983)
RGD
ParkinsonsUK-UCL
PMID:12505983, PMID:12505983 GO_REF:0000024, MGI:MGI:5700310, RGD:10412300 NCBI chr 3:161,298,750...161,304,627
Ensembl chr 3:161,298,962...161,304,625
JBrowse link
G Snca synuclein alpha ISO (PMID:20697033) RGD PMID:20697033 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin IDA RGD PMID:2001740 RGD:9590215 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO
ISS
(PMID:23129660)
GO_REF:0000024
RGD
UniProt
PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Svip small VCP interacting protein IC
IBA
ISO
PMID:17000876
PMID:21873635
(PMID:17872946)
RGD PMID:17872946, PMID:17000876, PMID:21873635 RGD:10047192, RGD:13792537 NCBI chr 1:107,368,117...107,373,807
Ensembl chr 1:107,368,117...107,373,807
JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,178,785...1,216,573
Ensembl chr18:1,178,787...1,216,409
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 ISS
ISO
GO_REF:0000024
(MGI:MGI:3813160|PMID:18606867)
UniProt
RGD
PMID:18606867 GO_REF:0000024, MGI:MGI:3813160 NCBI chr 1:162,703,394...162,713,560
Ensembl chr 1:162,703,442...162,713,610
JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:225,067,953...225,071,944
Ensembl chr 1:225,068,009...225,071,945
JBrowse link
G Usp25 ubiquitin specific peptidase 25 ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:15,436,080...15,558,646
Ensembl chr11:15,436,269...15,558,646
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta ISO (MGI:MGI:3530688|PMID:15677334), (MGI:MGI:3629477|PMID:12920182) RGD PMID:12920182, PMID:15677334 MGI:MGI:3530688, MGI:MGI:3629477 NCBI chr12:48,127,149...48,238,969
Ensembl chr12:48,127,149...48,238,887
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:16814735) RGD PMID:16814735 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19724020 RGD:2314644 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein IDA RGD PMID:11485163 RGD:2316274 NCBI chr13:36,147,667...36,156,076
Ensembl chr13:36,117,119...36,174,908
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:MGI:5474727 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Plin5 perilipin 5 ISS
ISO
GO_REF:0000024
(MGI:MGI:5440401|PMID:22532565), (MGI:MGI:5559662|PMID:22675471), (MGI:MGI:5559666|PMID:21885430)
UniProt
RGD
PMID:21885430, PMID:22532565, PMID:22675471 GO_REF:0000024, MGI:MGI:5440401, MGI:MGI:5559662, MGI:MGI:5559666 NCBI chr 9:10,956,013...10,961,782
Ensembl chr 9:10,956,056...10,961,782
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ISO
ISS
(PMID:25416781)
GO_REF:0000024
(MGI:MGI:5700285|PMID:25023281)
RGD
UniProt
PMID:25023281, PMID:25416781 GO_REF:0000024, MGI:MGI:5700285 NCBI chr 4:183,655,968...183,665,757
Ensembl chr 4:183,656,013...183,665,754
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B ISO MGI:MGI:2148638 (MGI:MGI:3027459|PMID:14581480) RGD PMID:14581480 MGI:MGI:3027459 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Ins2 insulin 2 ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
negative regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hp haptoglobin ISO (PMID:19740759) RGD PMID:19740759 NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804
JBrowse link
G Mt3 metallothionein 3 IDA RGD PMID:12058024 RGD:625483 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:MGI:5446858|PMID:22848640)
RGD PMID:22848640 MGI:MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) ISO
IEA
(PMID:16912035)
GO_REF:0000107
RGD
Ensembl
PMID:16912035 GO_REF:0000107 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta ISO
ISS
(PMID:25588945)
GO_REF:0000024
RGD
UniProt
PMID:25588945 GO_REF:0000024 NCBI chr 7:72,924,911...72,968,099
Ensembl chr 7:72,924,799...72,968,101
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO
ISS
MGI:MGI:1857830 (MGI:MGI:5751042|PMID:25592972), (MGI:MGI:5816436|PMID:26467158)
GO_REF:0000024
RGD
UniProt
PMID:25592972, PMID:26467158 GO_REF:0000024, MGI:MGI:5751042, MGI:MGI:5816436 NCBI chr 7:121,394,541...121,436,935
Ensembl chr 7:121,408,829...121,435,022
JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) RGD PMID:26203154 MGI:MGI:5694519 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 ISO MGI:MGI:2429784 (MGI:MGI:5430482|PMID:20705711) RGD PMID:20705711 MGI:MGI:5430482 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 ISO (PMID:22354037) RGD PMID:22354037 NCBI chr16:22,250,452...22,306,667
Ensembl chr16:22,250,470...22,306,662
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO
IBA
(PMID:25327288)
PMID:21873635
(MGI:MGI:3690270|PMID:16714284), (MGI:MGI:5563734|PMID:23274896)
RGD PMID:16714284, PMID:23274896, PMID:25327288, PMID:21873635 MGI:MGI:3690270, MGI:MGI:5563734, RGD:13792537 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO MGI:MGI:1857409|MGI:MGI:1891828 (MGI:MGI:3723543|PMID:17468177) RGD PMID:17468177 MGI:MGI:3723543 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Nrbp2 nuclear receptor binding protein 2 ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 7:117,145,106...117,151,694
Ensembl chr 7:117,145,961...117,151,694
JBrowse link
G Pink1 PTEN induced kinase 1 ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 ISO MGI:MGI:4044390 (MGI:MGI:5588624|PMID:24797518) RGD PMID:24797518 MGI:MGI:5588624 NCBI chr10:65,781,994...65,790,833
Ensembl chr10:65,780,494...65,790,272
JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 ISO (PMID:24475161) RGD PMID:24475161 NCBI chr13:73,423,396...73,460,890
Ensembl chr13:73,423,397...73,460,935
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:47,019,326...47,026,465
Ensembl chr10:47,018,974...47,026,465
JBrowse link
G Tsc1 TSC complex subunit 1 IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:24599401 RGD:11568679 NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
JBrowse link
G Usp36 ubiquitin specific peptidase 36 ISO (PMID:22622177) RGD PMID:22622177 NCBI chr10:107,292,828...107,324,355
Ensembl chr10:107,292,828...107,324,355
JBrowse link
negative regulation of macroautophagy by TORC1 signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO
ISS
(PMID:18383040)
GO_REF:0000024
RGD
UniProt
PMID:18383040 GO_REF:0000024 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 ISO (MGI:MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:MGI:5702499 NCBI chr 2:206,928,708...206,997,915
Ensembl chr 2:206,931,204...206,997,519
JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 ISO (PMID:12207026) RGD PMID:12207026 NCBI chr 5:74,248,996...74,368,167
Ensembl chr 5:74,248,996...74,368,186
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO
IBA
(PMID:12714508)
PMID:21873635
RGD PMID:12714508, PMID:21873635 RGD:13792537 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:107,338,465...107,386,072
Ensembl chr10:107,338,465...107,386,072
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO
IBA
IEA
(PMID:18383040)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18383040, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:23,543,125...23,594,170
Ensembl chr 7:23,544,215...23,594,133
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,156,948...147,163,467
Ensembl chr 4:147,156,948...147,163,467
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 ISS
ISO
GO_REF:0000024
(PMID:23200856)
UniProt
RGD
PMID:23200856 GO_REF:0000024 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich pentatricopeptide repeat containing ISO MGI:MGI:1916394|MGI:MGI:3857306|MGI:MGI:5438913 (MGI:MGI:5301479|PMID:21880015), (MGI:MGI:5438202|PMID:22045337) RGD PMID:21880015, PMID:22045337 MGI:MGI:5301479, MGI:MGI:5438202 NCBI chr 6:7,984,043...8,066,874
Ensembl chr 6:7,984,019...8,066,868
JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein ISO
IBA
MGI:MGI:1919666 (MGI:MGI:5438202|PMID:22045337)
PMID:21873635
RGD PMID:22045337, PMID:21873635 MGI:MGI:5438202, RGD:13792537 NCBI chr 6:111,476,768...111,486,039
Ensembl chr 6:111,476,768...111,486,039
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO MGI:MGI:5648633 (MGI:MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:MGI:5603233 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Rnf41 ring finger protein 41 ISO MGI:MGI:1921624 (MGI:MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:MGI:5603233 NCBI chr 7:2,827,242...2,854,230
Ensembl chr 7:2,827,247...2,852,681
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO MGI:MGI:5319187 (MGI:MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:MGI:5319065 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
G Tp53 tumor protein p53 ISO MGI:MGI:1857263 (MGI:MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:MGI:5319065 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:48,262,663...48,316,580
Ensembl chr12:48,262,658...48,316,722
JBrowse link
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 ISO (MGI:MGI:5581539|PMID:24709290) RGD PMID:24709290 MGI:MGI:5581539 NCBI chr 4:113,883,671...113,886,833
Ensembl chr 4:113,883,670...113,886,994
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 IEA
ISO
GO_REF:0000107
(PMID:25225333)
Ensembl
RGD
PMID:25225333 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Pkp1 plakophilin 1 ISO (PMID:25225333) RGD PMID:25225333 NCBI chr13:52,705,174...52,753,089
Ensembl chr13:52,705,174...52,752,997
JBrowse link
G Pkp3 plakophilin 3 ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx34 DExH-box helicase 34 ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 1:78,069,260...78,112,488
Ensembl chr 1:78,090,044...78,112,488
JBrowse link
G Nbas NBAS subunit of NRZ tethering complex ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 6:38,474,773...38,777,146
Ensembl chr 6:38,474,804...38,777,806
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 ISO
ISS
(PMID:18447585)
GO_REF:0000024
RGD
UniProt
PMID:18447585 GO_REF:0000024 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268
JBrowse link
G Secisbp2 SECIS binding protein 2 ISO
IEA
MGI:MGI:4433050 (MGI:MGI:5582859|PMID:24274065)
GO_REF:0000107
RGD
Ensembl
PMID:24274065 GO_REF:0000107, MGI:MGI:5582859 NCBI chr17:13,555,348...13,586,595
Ensembl chr17:13,555,349...13,586,554
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
G Tob1 transducer of ErbB-2.1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18377426)
Ensembl
UniProt
RGD
PMID:18377426 GO_REF:0000024, GO_REF:0000107 NCBI chr10:81,913,689...81,915,727
Ensembl chr10:81,913,689...81,915,716
JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:2302419) RGD PMID:2302419 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO (PMID:8175643) RGD PMID:8175643 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346
JBrowse link
G F8a1 coagulation factor VIII-associated 1 ISO
ISS
(PMID:27815841)
GO_REF:0000024
RGD
UniProt
PMID:27815841 GO_REF:0000024 NCBI chr 1:147,021,436...147,022,950
Ensembl chr 1:147,021,436...147,022,950
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 ISO (PMID:21669198) RGD PMID:21669198 NCBI chr19:44,164,935...44,175,771
Ensembl chr19:44,164,935...44,175,770
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IMP
ISO
PMID:17517623
(MGI:MGI:6148636|PMID:17517623)
RGD PMID:17517623, PMID:17517623 MGI:MGI:6148636, RGD:13514081 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681
JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 ISO
ISS
(PMID:29295817)
GO_REF:0000024
RGD
UniProt
PMID:29295817 GO_REF:0000024 NCBI chr 3:46,284,961...46,325,230
Ensembl chr 3:46,286,712...46,324,057
JBrowse link
G Ophn1 oligophrenin 1 ISO
IBA
(MGI:MGI:5303043|PMID:21874017)
PMID:21873635
RGD PMID:21874017, PMID:21873635 MGI:MGI:5303043, RGD:13792537 NCBI chr  X:68,185,865...68,579,518
Ensembl chr  X:68,189,161...68,563,137
JBrowse link
G Prkcg protein kinase C, gamma ISO
ISS
(MGI:MGI:5467682|PMID:23185022)
GO_REF:0000024
RGD
UniProt
PMID:23185022 GO_REF:0000024, MGI:MGI:5467682 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 ISO (PMID:29934401) RGD PMID:29934401 NCBI chr19:10,827,057...10,856,747
Ensembl chr19:10,827,371...10,856,745
JBrowse link
G Psmf1 proteasome inhibitor subunit 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10764772)
Ensembl
UniProt
RGD
PMID:10764772 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:147,238,111...147,263,275
Ensembl chr 3:147,238,114...147,263,275
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 ISO MGI:MGI:2176228|MGI:MGI:5758867 (MGI:MGI:5643882|PMID:25683716) RGD PMID:25683716 MGI:MGI:5643882 NCBI chr10:53,595,854...53,608,437
Ensembl chr10:53,595,854...53,608,435
JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO
IEA
(MGI:MGI:5614537|PMID:25088257)
GO_REF:0000107
RGD
Ensembl
PMID:25088257 GO_REF:0000107, MGI:MGI:5614537 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:136,180,640...136,185,651
Ensembl chr 6:136,182,006...136,185,651
JBrowse link
G Bag6 BAG cochaperone 6 ISO
ISS
(MGI:MGI:3808636|PMID:18678708)
GO_REF:0000024
RGD
UniProt
PMID:18678708 GO_REF:0000024, MGI:MGI:3808636 NCBI chr20:5,124,512...5,138,084
Ensembl chr20:5,125,349...5,138,084
JBrowse link
G Camlg calcium modulating ligand ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:9,523,792...9,534,683
Ensembl chr17:9,523,795...9,534,653
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:51,818,887...51,834,443
Ensembl chr15:51,818,897...51,834,030
JBrowse link
G Clec16a C-type lectin domain containing 16A ISO MGI:MGI:5648633 (MGI:MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:MGI:5603233 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO
IBA
ISS
(PMID:15313915)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15313915, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:15,697,292...16,862,873 JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 ISO (MGI:MGI:3807767|PMID:11546783) RGD PMID:11546783 MGI:MGI:3807767 NCBI chr19:24,786,604...24,798,231
Ensembl chr19:24,786,628...24,798,233
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISS
ISO
GO_REF:0000024
(PMID:16280321), (PMID:24613385)
UniProt
RGD
PMID:16280321, PMID:24613385 GO_REF:0000024 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Klhl40 kelch-like family member 40 ISO
IBA
(MGI:MGI:5586592|PMID:24960163)
PMID:21873635
RGD PMID:24960163, PMID:21873635 MGI:MGI:5586592, RGD:13792537 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G Map1a microtubule-associated protein 1A ISO (MGI:MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:MGI:5703671 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Mtm1 myotubularin 1 ISO MGI:MGI:2450997 (MGI:MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:MGI:5510937 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409
JBrowse link
G N4bp1 Nedd4 binding protein 1 ISO
IBA
(MGI:MGI:3829128|PMID:17592138)
PMID:21873635
RGD PMID:17592138, PMID:21873635 MGI:MGI:3829128, RGD:13792537 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Park7 Parkinsonism associated deglycase ISO
IEA
(PMID:17015834)
GO_REF:0000107
RGD
Ensembl
PMID:17015834 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Pbk PDZ binding kinase ISO MGI:MGI:5293435 (MGI:MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:MGI:5293269 NCBI chr15:42,489,253...42,500,377
Ensembl chr15:42,489,377...42,500,395
JBrowse link
G Rpl11 ribosomal protein L11 ISO
ISS
(MGI:MGI:5897550|PMID:21804542)
GO_REF:0000024
RGD
UniProt
PMID:21804542 GO_REF:0000024, MGI:MGI:5897550 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Rybp RING1 and YY1 binding protein ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:132,689,623...132,740,823
Ensembl chr 4:132,689,531...132,740,938
JBrowse link
G Sdcbp syndecan binding protein ISO
ISS
(PMID:25893292)
GO_REF:0000024
RGD
UniProt
PMID:25893292 GO_REF:0000024 NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485
JBrowse link
G Senp1 SUMO specific peptidase 1 ISO MGI:MGI:3818522 (MGI:MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:MGI:3818351 NCBI chr 7:139,626,444...139,684,587
Ensembl chr 7:139,630,515...139,675,245
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
(MGI:MGI:3624046|PMID:16611981)
GO_REF:0000107
RGD
Ensembl
PMID:16611981 GO_REF:0000107, MGI:MGI:3624046 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 ISO (MGI:MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:MGI:5310666 NCBI chr 8:118,206,678...118,326,264
Ensembl chr 8:118,206,698...118,325,537
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 2:30,664,407...30,668,414
Ensembl chr 2:30,664,639...30,668,414
JBrowse link
G Tlk2 tousled-like kinase 2 ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:93,410,181...93,507,277
Ensembl chr10:93,415,399...93,507,277
JBrowse link
G Trim39 tripartite motif-containing 39 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:23213251)
UniProt
RGD
PMID:23213251, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546
JBrowse link
G Ubxn1 UBX domain protein 1 ISO
ISS
(PMID:20351172)
GO_REF:0000024
RGD
UniProt
PMID:20351172 GO_REF:0000024 NCBI chr 1:225,067,953...225,071,944
Ensembl chr 1:225,068,009...225,071,945
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:60,568,102...60,603,812
Ensembl chr13:60,545,635...60,603,811
JBrowse link
G Usp7 ubiquitin specific peptidase 7 IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr10:6,930,462...7,019,910
Ensembl chr10:6,975,244...7,018,930
JBrowse link
G Wac WW domain containing adaptor with coiled-coil ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:60,887,606...60,946,630
Ensembl chr17:60,888,017...60,946,426
JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO (MGI:MGI:5468878|PMID:23277542)
UniProtKB:Q9BXM7 (PMID:25217637)
RGD PMID:23277542, PMID:25217637 MGI:MGI:5468878 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Efna1 ephrin A1 ISO UniProtKB:P54764 (PMID:24217950) RGD PMID:24217950 NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
JBrowse link
G Epha4 Eph receptor A4 ISO UniProtKB:P20827 (PMID:24217950) RGD PMID:24217950 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
negative regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtmr2 myotubularin related protein 2 IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:12,283,471...12,334,014
Ensembl chr 8:12,284,528...12,333,316
JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 ISO (PMID:25660456) RGD PMID:25660456 NCBI chr10:57,641,682...57,653,554
Ensembl chr10:57,644,207...57,653,359
JBrowse link
G Derl3 derlin 3 ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:13,692,102...13,707,645
Ensembl chr20:13,704,314...13,706,205
JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 ISO (PMID:25660456) RGD PMID:25660456 NCBI chr14:115,314,890...115,352,871
Ensembl chr14:115,314,890...115,352,562
JBrowse link
G Os9 OS9, endoplasmic reticulum lectin ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 7:70,378,625...70,407,135
Ensembl chr 7:70,380,311...70,407,177
JBrowse link
G Svip small VCP interacting protein ISO
IBA
(PMID:25660456)
PMID:21873635
RGD PMID:25660456, PMID:21873635 RGD:13792537 NCBI chr 1:107,368,117...107,373,807
Ensembl chr 1:107,368,117...107,373,807
JBrowse link
G Ubac2 UBA domain containing 2 ISO (PMID:25660456) RGD PMID:25660456 NCBI chr15:108,286,407...108,433,531
Ensembl chr15:108,286,453...108,433,529
JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:11,700,089...11,721,823
Ensembl chr20:11,700,089...11,721,838
JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 5:48,274,387...48,292,699
Ensembl chr 5:48,274,477...48,290,658
JBrowse link
G Yod1 YOD1 deubiquitinase ISO (PMID:24068323) RGD PMID:24068323 NCBI chr13:47,441,296...47,443,013
Ensembl chr13:47,440,803...47,443,188
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:124,136,949...124,177,426
Ensembl chr 6:124,142,395...124,177,404
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein ISO
IBA
(PMID:28007894)
PMID:21873635
RGD PMID:28007894, PMID:21873635 RGD:13792537 NCBI chr15:19,690,079...19,720,683
Ensembl chr15:19,690,194...19,717,774
JBrowse link
negative regulation of triglyceride catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:18635818), (PMID:3973011)
Ensembl
RGD
PMID:3973011, PMID:18635818, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO
ISS
(MGI:MGI:3617276|PMID:16219662)
GO_REF:0000024
RGD
UniProt
PMID:16219662 GO_REF:0000024, MGI:MGI:3617276 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma IMP RGD PMID:21435395 RGD:6482711 NCBI chr 6:51,465,696...51,501,234
Ensembl chr 6:51,465,908...51,498,337
JBrowse link
G Plin5 perilipin 5 ISS
ISO
GO_REF:0000024
(MGI:MGI:5476606|PMID:23345411), (MGI:MGI:5559662|PMID:22675471)
UniProt
RGD
PMID:22675471, PMID:23345411 GO_REF:0000024, MGI:MGI:5476606, MGI:MGI:5559662 NCBI chr 9:10,956,013...10,961,782
Ensembl chr 9:10,956,056...10,961,782
JBrowse link
G Sorl1 sortilin related receptor 1 ISO (MGI:MGI:5811185|PMID:27322061) RGD PMID:27322061 MGI:MGI:5811185 NCBI chr 8:46,228,077...46,287,171 JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ISO (MGI:MGI:4461099|PMID:20100865) RGD PMID:20100865 MGI:MGI:4461099 NCBI chr20:7,484,550...7,636,498
Ensembl chr20:7,484,550...7,636,497
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO (MGI:MGI:5468878|PMID:23277542)
(PMID:16173922), (PMID:18560357)
RGD PMID:16173922, PMID:18560357, PMID:23277542 MGI:MGI:5468878 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043
JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
JBrowse link
G Pdcl3 phosducin-like 3 ISO (PMID:23792958) RGD PMID:23792958 NCBI chr 9:45,672,257...45,680,728
Ensembl chr 9:45,672,157...45,680,799
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:MGI:4887523 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:MGI:4887523 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Qrich2 glutamine rich 2 ISO
IEA
(PMID:30683861)
(MGI:MGI:6277293|PMID:30683861)
GO_REF:0000107
RGD
Ensembl
PMID:30683861 GO_REF:0000107, MGI:MGI:6277293 NCBI chr10:105,397,470...105,422,811
Ensembl chr10:105,399,814...105,412,627
JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:85,721,398...85,725,359
Ensembl chr10:85,721,394...85,725,429
JBrowse link
G Rpl5 ribosomal protein L5 ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:2,860,963...2,867,397
Ensembl chr14:2,860,965...2,867,397
JBrowse link
G Rps7 ribosomal protein S7 ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:47,899,525...47,904,389
Ensembl chr 6:47,899,525...47,904,437
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO
ISS
(PMID:23129660)
GO_REF:0000024
RGD
UniProt
PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:MGI:1343085 (MGI:MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:MGI:4355593 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Trim39 tripartite motif-containing 39 ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546
JBrowse link
G Wnt1 Wnt family member 1 ISO (MGI:MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:MGI:3628833 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl4 ELAV like RNA binding protein 4 ISO
ISS
(PMID:18218628)
GO_REF:0000024
RGD
UniProt
PMID:18218628 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
JBrowse link
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO (MGI:MGI:5816163|PMID:27510903) RGD PMID:27510903 MGI:MGI:5816163 NCBI chr16:24,582,000...24,612,773
Ensembl chr16:24,578,678...24,612,732
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISS
ISO
GO_REF:0000024
(PMID:23200856)
UniProt
RGD
PMID:23200856 GO_REF:0000024 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 ISO (PMID:23290079) RGD PMID:23290079 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
telomerase RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 ISO (PMID:22238380) RGD PMID:22238380 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO (PMID:25467444), (PMID:26950371) RGD PMID:25467444, PMID:26950371 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475
JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO
IEA
(PMID:27510903)
GO_REF:0000107
RGD
Ensembl
PMID:27510903 GO_REF:0000107 NCBI chr16:24,582,000...24,612,773
Ensembl chr16:24,578,678...24,612,732
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878), (PMID:26950371) RGD PMID:26482878, PMID:26950371 NCBI chr10:1,309,724...1,461,123
Ensembl chr10:1,308,414...1,461,269
JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun2 NOP2/Sun RNA methyltransferase 2 ISO (MGI:MGI:6194005|PMID:22885326) RGD PMID:22885326 MGI:MGI:6194005 NCBI chr 1:36,295,650...36,319,906
Ensembl chr 1:36,295,650...36,319,966
JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6194005|PMID:22885326)
UniProt
RGD
PMID:22885326 GO_REF:0000024, MGI:MGI:6194005 NCBI chr17:80,824,652...80,859,585
Ensembl chr17:80,826,846...80,860,195
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      catabolic process 2543
        negative regulation of catabolic process 325
          negative regulation of cellular catabolic process 258
            negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process 0
            negative regulation of DNA catabolic process + 4
            negative regulation of RNA catabolic process + 70
            negative regulation of UDP-glucose catabolic process 0
            negative regulation of acetate catabolic process 0
            negative regulation of autophagy + 77
            negative regulation of cell wall polysaccharide catabolic process + 0
            negative regulation of cellobiose catabolic process 0
            negative regulation of cellular alcohol catabolic process 0
            negative regulation of cellular amide catabolic process + 0
            negative regulation of cellular amine catabolic process + 1
            negative regulation of cellular protein catabolic process + 87
            negative regulation of cellulose catabolic process 0
            negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process 0
            negative regulation of elastin catabolic process 1
            negative regulation of fatty acid beta-oxidation + 7
            negative regulation of ferulate catabolic process 0
            negative regulation of gamma-aminobutyric acid catabolic process 0
            negative regulation of glucocorticoid catabolic process 0
            negative regulation of glycogen catabolic process 2
            negative regulation of hydrogen peroxide catabolic process 2
            negative regulation of juvenile hormone catabolic process 0
            negative regulation of membrane protein ectodomain proteolysis 7
            negative regulation of nucleotide catabolic process + 0
            negative regulation of ornithine catabolic process 0
            negative regulation of phosphatidylcholine catabolic process 1
            negative regulation of prostaglandin catabolic process 0
            negative regulation of receptor catabolic process + 3
            negative regulation of starch catabolic process + 0
            negative regulation of syringal lignin catabolic process 0
            negative regulation of tetrapyrrole catabolic process + 0
            negative regulation of toluene catabolic process 0
            negative regulation of triglyceride catabolic process 5
Path 2
Term Annotations click to browse term
  biological_process 20014
    biological regulation 13759
      regulation of biological process 13071
        regulation of metabolic process 7007
          regulation of catabolic process 931
            negative regulation of catabolic process 325
              negative regulation of cellular catabolic process 258
                negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process 0
                negative regulation of DNA catabolic process + 4
                negative regulation of RNA catabolic process + 70
                negative regulation of UDP-glucose catabolic process 0
                negative regulation of acetate catabolic process 0
                negative regulation of autophagy + 77
                negative regulation of cell wall polysaccharide catabolic process + 0
                negative regulation of cellobiose catabolic process 0
                negative regulation of cellular alcohol catabolic process 0
                negative regulation of cellular amide catabolic process + 0
                negative regulation of cellular amine catabolic process + 1
                negative regulation of cellular protein catabolic process + 87
                negative regulation of cellulose catabolic process 0
                negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process 0
                negative regulation of elastin catabolic process 1
                negative regulation of fatty acid beta-oxidation + 7
                negative regulation of ferulate catabolic process 0
                negative regulation of gamma-aminobutyric acid catabolic process 0
                negative regulation of glucocorticoid catabolic process 0
                negative regulation of glycogen catabolic process 2
                negative regulation of hydrogen peroxide catabolic process 2
                negative regulation of juvenile hormone catabolic process 0
                negative regulation of membrane protein ectodomain proteolysis 7
                negative regulation of nucleotide catabolic process + 0
                negative regulation of ornithine catabolic process 0
                negative regulation of phosphatidylcholine catabolic process 1
                negative regulation of prostaglandin catabolic process 0
                negative regulation of receptor catabolic process + 3
                negative regulation of starch catabolic process + 0
                negative regulation of syringal lignin catabolic process 0
                negative regulation of tetrapyrrole catabolic process + 0
                negative regulation of toluene catabolic process 0
                negative regulation of triglyceride catabolic process 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.