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ONTOLOGY REPORT - ANNOTATIONS


Term:RNAi effector complex
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Accession:GO:0031332 term browser browse the term
Definition:Any protein complex that mediates the effects of small interfering RNAs on gene expression. Most known examples contain one or more members of the Argonaute family of proteins.


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RISC complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago1 argonaute RISC component 1 JBrowse link 5 144,444,390 144,479,430 RGD:1624291
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:1600115
RGD:1624291
G Ago3 argonaute RISC catalytic component 3 JBrowse link 5 144,355,792 144,436,509 RGD:1624291
G Ago4 argonaute RISC component 4 JBrowse link 5 144,501,875 144,557,165 RGD:1624291
G Dcp2 decapping mRNA 2 JBrowse link 18 35,489,274 35,671,676 RGD:1624291
G Ddx6 DEAD-box helicase 6 JBrowse link 8 48,924,768 48,961,394 RGD:1624291
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1624291
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
RGD:13792537
G Eif4e eukaryotic translation initiation factor 4E JBrowse link 2 243,819,616 243,853,987 RGD:1624291
G Limd1 LIM domains containing 1 JBrowse link 8 132,553,218 132,598,826 RGD:1624291
G Mir1 microRNA 1 JBrowse link 18 2,054,933 2,055,019 RGD:1624291
G Mir101-2 microRNA 101-2 JBrowse link 1 247,263,723 247,263,819 RGD:1624291
G Mir101a microRNA 101a JBrowse link 5 120,168,437 120,168,511 RGD:1624291
G Mir106a microRNA 106a JBrowse link X 140,117,891 140,117,968 RGD:1624291
G Mir106b microRNA 106b JBrowse link 12 19,307,752 19,307,833 RGD:1624291
G Mir122 microRNA 122 JBrowse link 18 60,755,285 60,755,369 RGD:1624291
G Mir124-1 microRNA 124-1 JBrowse link 15 47,964,298 47,964,382 RGD:1624291
G Mir124-2 microRNA 124-2 JBrowse link 2 102,311,603 102,311,711 RGD:1624291
G Mir124-3 microRNA 124-3 JBrowse link 3 176,406,205 176,406,291 RGD:1624291
G Mir139 microRNA 139 JBrowse link 1 166,589,545 166,589,612 RGD:1624291
G Mir140 microRNA 140 JBrowse link 19 39,608,951 39,609,049 RGD:1624291
G Mir144 microRNA 144 JBrowse link 10 65,291,365 65,291,447 RGD:1624291
G Mir145 microRNA 145 JBrowse link 18 56,969,907 56,969,994 RGD:1624291
G Mir150 microRNA 150 JBrowse link 1 101,115,974 101,116,058 RGD:1624291
G Mir15b microRNA 15b JBrowse link 2 165,605,923 165,606,020 RGD:1624291
G Mir16 microRNA 16 JBrowse link 2 165,606,072 165,606,166 RGD:1624291
G Mir17 microRNA 17 JBrowse link 15 100,179,879 100,179,962 RGD:1624291
G Mir181c microRNA 181c JBrowse link 19 25,290,211 25,290,316 RGD:1624291
G Mir194-1 microRNA 194-1 JBrowse link 13 103,250,576 103,250,658 RGD:1624291
G Mir194-2 microRNA 194-2 JBrowse link 1 221,634,786 221,634,870 RGD:1624291
G Mir195 microRNA 195 JBrowse link 10 56,845,301 56,845,387 RGD:1624291
G Mir19b1 microRNA 19b-1 JBrowse link 15 100,180,464 100,180,550 RGD:1624291
G Mir19b2 microRNA 19b-2 JBrowse link X 140,117,379 140,117,474 RGD:1624291
G Mir1b microRNA 1b JBrowse link 3 175,769,716 175,769,800 RGD:1624291
G Mir20a microRNA 20a JBrowse link 15 100,180,334 100,180,418 RGD:1624291
G Mir20b microRNA 20b JBrowse link X 140,117,518 140,117,589 RGD:1624291
G Mir21 microRNA 21 JBrowse link 10 73,902,210 73,902,301 RGD:1624291
G Mir219a1 microRNA 219a-1 JBrowse link 20 3,816,158 3,816,267 RGD:1624291
G Mir221 microRNA 221 JBrowse link X 3,684,480 3,684,588 RGD:1624291
G Mir222 microRNA 222 JBrowse link X 3,683,919 3,684,021 RGD:1624291
G Mir23a microRNA 23a JBrowse link 19 25,318,582 25,318,656 RGD:1624291
G Mir26a microRNA 26a JBrowse link 8 127,714,441 127,714,530 RGD:1624291
G Mir26b microRNA 26b JBrowse link 9 81,675,275 81,675,359 RGD:1624291
G Mir27a microRNA 27a JBrowse link 19 25,318,736 25,318,822 RGD:1624291
G Mir28 microRNA 28 JBrowse link 11 79,380,523 79,380,608 RGD:1624291
G Mir298 microRNA 298 JBrowse link 3 172,357,943 172,358,024 RGD:1624291
G Mir29a microRNA 29a JBrowse link 4 58,343,931 58,344,018 RGD:1624291
G Mir30a microRNA 30a JBrowse link 9 29,542,635 29,542,705 RGD:1624291
G Mir30c1 microRNA 30c-1 JBrowse link 5 139,699,877 139,699,965 RGD:1624291
G Mir30c2 microRNA 30c-2 JBrowse link 9 29,562,376 29,562,459 RGD:1624291
G Mir320a microRNA 320a JBrowse link 15 52,134,276 52,134,357 RGD:1624291
G Mir322 microRNA 322 JBrowse link X 158,148,161 158,148,255 RGD:1624291
G Mir324 microRNA 324 JBrowse link 10 56,621,126 56,621,208 RGD:1624291
G Mir326 microRNA 326 JBrowse link 1 164,518,401 164,518,495 RGD:1624291
G Mir328 microRNA 328 JBrowse link 19 37,263,199 37,263,282 RGD:1624291
G Mir331 microRNA 331 JBrowse link 7 34,881,095 34,881,190 RGD:1624291
G Mir342 microRNA 342 JBrowse link 6 132,561,169 132,561,267 RGD:1624291
G Mir345 microRNA 345 JBrowse link 6 132,748,968 132,749,063 RGD:1624291
G Mir34c microRNA 34c JBrowse link 8 55,492,024 55,492,100 RGD:1624291
G Mir361 microRNA 361 JBrowse link X 84,708,911 84,708,980 RGD:1624291
G Mir451a microRNA 451a JBrowse link 10 65,291,204 65,291,275 RGD:1624291
G Mir455 microRNA 455 JBrowse link 5 79,097,208 79,097,285 RGD:1624291
G Mir486 microRNA 486 RGD:1624291
G Mir500 microRNA 500 JBrowse link X 16,121,332 16,121,411 RGD:1624291
G Mir532 microRNA 532 JBrowse link X 16,109,870 16,109,948 RGD:1624291
G Mir652 microRNA 652 JBrowse link X 114,002,534 114,002,614 RGD:1624291
G Mir708 microRNA 708 JBrowse link 1 161,221,246 161,221,333 RGD:1624291
G Mir7a1 microRNA 7a-1 JBrowse link 17 6,675,016 6,675,112 RGD:1624291
G Mirlet7a1 microRNA let-7a-1 JBrowse link 17 16,417,853 16,417,946 RGD:1624291
G Mirlet7b microRNA let-7b JBrowse link 7 126,590,627 126,590,711 RGD:1624291
G Mirlet7c1 microRNA let-7c-1 JBrowse link 11 16,052,873 16,052,966 RGD:1624291
G Mirlet7c2 microRNA let-7c-2 JBrowse link 7 126,590,212 126,590,306 RGD:1624291
G Mirlet7d microRNA let-7d JBrowse link 17 16,419,980 16,420,077 RGD:1624291
G Mirlet7f1 microRNA let-7f-1 JBrowse link 17 16,418,217 16,418,313 RGD:1624291
G Mirlet7f2 microRNA let-7f-2 JBrowse link X 21,583,272 21,583,354 RGD:1624291
G Mirlet7g microRNA let-7g JBrowse link 8 114,874,457 114,874,544 RGD:1624291
G Mirlet7i microRNA let-7i JBrowse link 7 66,802,731 66,802,815 RGD:1624291
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:1624291
G Scarna15 small Cajal body-specific RNA 15 JBrowse link 1 143,360,224 143,360,287 RGD:1624291
G Snd1 staphylococcal nuclease and tudor domain containing 1 JBrowse link 4 55,772,377 56,171,669 RGD:1600115
G Snora58 small nucleolar RNA, H/ACA box 58 JBrowse link 6 111,468,732 111,468,807 RGD:1624291
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link 7 144,121,688 144,126,860 RGD:1624291
RGD:1600115
G Tnrc6a trinucleotide repeat containing adaptor 6A JBrowse link 1 192,991,584 193,146,403 RGD:1624291
G Xpo5 exportin 5 JBrowse link 9 17,125,201 17,163,170 RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  cellular_component 19949
    protein-containing complex 5829
      ribonucleoprotein complex 1100
        RNAi effector complex 84
          ARC complex 0
          RISC complex 84
          RITS complex 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.