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ONTOLOGY REPORT - ANNOTATIONS


Term:chromatin DNA binding
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Accession:GO:0031490 term browser browse the term
Definition:Interacting selectively and non-covalently with DNA that is assembled into chromatin.


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chromatin DNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027368.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:26,772,096...26,772,732 JBrowse link
G Actn4 actinin alpha 4 ISO (PMID:25411248) RGD PMID:25411248 NCBI chr 1:87,078,012...87,147,347
Ensembl chr 1:87,078,020...87,147,333
JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ISO
ISS
(PMID:11809897)
GO_REF:0000024
RGD
UniProt
PMID:11809897 GO_REF:0000024 NCBI chr15:27,849,943...27,852,083
Ensembl chr15:27,849,979...27,852,082
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:3578607|PMID:15788459) RGD PMID:15788459 MGI:3578607 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Bcl6 BCL6, transcription repressor ISO (MGI:3695553|PMID:17125145) RGD PMID:17125145 MGI:3695553 NCBI chr11:80,255,790...80,279,075
Ensembl chr11:80,255,790...80,279,075
JBrowse link
G Clock clock circadian regulator IEA
ISO
ISS
GO_REF:0000107
(MGI:5568183|PMID:24610784)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24610784 GO_REF:0000024, GO_REF:0000107, MGI:5568183 NCBI chr14:34,418,226...34,502,218
Ensembl chr14:34,446,616...34,502,218
JBrowse link
G Crebbp CREB binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:24049074) RGD PMID:24049074 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Ep300 E1A binding protein p300 IDA
ISO
(MGI:3796777|PMID:18458156) RGD PMID:18458156, PMID:20702579 MGI:3796777, RGD:5128544 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO (PMID:19734898)
(MGI:3789777|PMID:18483221), (MGI:5576864|PMID:24137001)
RGD PMID:18483221, PMID:19734898, PMID:24137001 MGI:3789777, MGI:5576864 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Foxc2 forkhead box C2 ISO (PMID:16456100) RGD PMID:16456100 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Foxo3 forkhead box O3 ISO (MGI:5572869|PMID:17521387) RGD PMID:17521387 MGI:5572869 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Gata1 GATA binding protein 1 ISO
ISS
(PMID:22235304)
GO_REF:0000024
RGD
UniProt
PMID:22235304 GO_REF:0000024 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Grhl1 grainyhead-like transcription factor 1 ISO (PMID:21081122) RGD PMID:21081122 NCBI chr 6:43,734,837...43,795,757
Ensembl chr 6:43,743,702...43,794,342
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO (PMID:21081122) RGD PMID:21081122 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO (PMID:21081122) RGD PMID:21081122 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G H1f0 H1 histone family, member 0 ISO (PMID:15911621) RGD PMID:15911621 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G H1f1 H1.1 linker histone, cluster member ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:43,614,101...43,614,844
Ensembl chr17:43,614,101...43,614,844
JBrowse link
G H1f2 H1.2 linker histone, cluster member ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:43,638,938...43,640,445
Ensembl chr17:43,639,749...43,640,387
JBrowse link
G H1f4 H1.4 linker histone, cluster member ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:43,734,461...43,735,120
Ensembl chr17:43,734,461...43,735,120
JBrowse link
G H1f5 H1.5 linker histone, cluster member ISO (PMID:15911621), (PMID:22956909) RGD PMID:15911621, PMID:22956909 NCBI chr17:44,766,313...44,766,981
Ensembl chr17:44,766,313...44,766,981
JBrowse link
G H2az1 H2A.Z variant histone 1 ISO (PMID:19834540), (PMID:23637611) RGD PMID:19834540, PMID:23637611 NCBI chr 2:243,105,224...243,107,333
Ensembl chr 2:243,105,674...243,106,956
JBrowse link
G H4f3 H1.3 linker histone, cluster member ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:43,797,711...43,798,450
Ensembl chr17:43,797,721...43,798,383
JBrowse link
G Hdac2 histone deacetylase 2 ISO (MGI:3796777|PMID:18458156) RGD PMID:18458156 MGI:3796777 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hdac3 histone deacetylase 3 ISO (MGI:3796777|PMID:18458156) RGD PMID:18458156 MGI:3796777 NCBI chr18:31,073,057...31,094,347
Ensembl chr18:31,073,058...31,094,303
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA
ISO
GO_REF:0000107
(PMID:11003645)
Ensembl
RGD
PMID:11003645 GO_REF:0000107 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:52,241,801...52,261,276
Ensembl chr15:52,241,801...52,261,276
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:21085490) RGD PMID:21085490 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Insm1 INSM transcriptional repressor 1 ISO (PMID:16569215), (PMID:18417529) RGD PMID:16569215, PMID:18417529 NCBI chr 3:140,427,961...140,430,467 JBrowse link
G Jmjd1c jumonji domain containing 1C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:22,751,743...22,914,080
Ensembl chr20:22,751,743...22,882,672
JBrowse link
G Kdm3a lysine demethylase 3A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:99,503,160...99,547,315
Ensembl chr 4:99,503,176...99,546,905
JBrowse link
G Kdm3b lysine demethylase 3B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:27,593,823...27,631,129
Ensembl chr18:27,576,129...27,631,088
JBrowse link
G Kdm4d lysine demethylase 4D ISO (MGI:55267|PMID:6953429) RGD PMID:6953429 MGI:55267 NCBI chr 8:12,968,192...12,993,651
Ensembl chr 8:13,511,805...13,513,337
JBrowse link
G Kdm5a lysine demethylase 5A ISO (MGI:3789777|PMID:18483221) RGD PMID:18483221 MGI:3789777 NCBI chr 4:152,892,388...152,972,196
Ensembl chr 4:152,892,388...152,972,201
JBrowse link
G Kdm6a lysine demethylase 6A IBA
ISO
PMID:21873635
(MGI:5506833|PMID:23658530)
RGD PMID:23658530, PMID:21873635 MGI:5506833, RGD:13792537 NCBI chr  X:4,805,493...4,945,788
Ensembl chr  X:4,806,277...4,945,944
JBrowse link
G Kdm6b lysine demethylase 6B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,779,742...5,786,213
Ensembl chr20:6,545,083...6,556,350
JBrowse link
G Lemd3 LEM domain containing 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:62,976,671...63,045,860
Ensembl chr 7:62,996,336...63,045,728
JBrowse link
G LOC100362333 DNA-directed DNA polymerase epsilon 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:118,816,053...118,816,725
Ensembl chr 7:118,816,218...118,816,655
Ensembl chr 5:118,816,218...118,816,655
JBrowse link
G LOC108348091 erythroid transcription factor ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:15,374,725...15,382,575
Ensembl chr  X:15,273,933...15,281,759
JBrowse link
G LOC108348120 LEM domain-containing protein 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:6,544,925...6,556,668
Ensembl chr20:6,545,083...6,556,350
JBrowse link
G Macroh2a1 macroH2A.1 histone IEA
ISO
GO_REF:0000104
(PMID:19734898), (PMID:24071584)
UniProt
RGD
PMID:19734898, PMID:24071584 GO_REF:0000104 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Macroh2a2 macroH2A.2 histone ISO (PMID:19734898) RGD PMID:19734898 NCBI chr20:31,352,924...31,402,483
Ensembl chr20:31,352,960...31,402,483
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA RGD PMID:9038338 RGD:1601325 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Med1 mediator complex subunit 1 IDA RGD PMID:20702579 RGD:5128544 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Myod1 myogenic differentiation 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5508271|PMID:15706034), (MGI:5608518|PMID:25085416)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15706034, PMID:25085416 GO_REF:0000024, GO_REF:0000107, MGI:5508271, MGI:5608518 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin ISS
ISO
GO_REF:0000024
(MGI:5508271|PMID:15706034), (MGI:5526919|PMID:22847234), (MGI:5608518|PMID:25085416)
UniProt
RGD
PMID:15706034, PMID:22847234, PMID:25085416 GO_REF:0000024, MGI:5508271, MGI:5526919, MGI:5608518 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Neurog3 neurogenin 3 ISO (MGI:3619850|PMID:16511571) RGD PMID:16511571 MGI:3619850 NCBI chr20:31,761,419...31,762,893
Ensembl chr20:31,761,405...31,762,893
JBrowse link
G Nkap NFKB activating protein IEA
ISO
GO_REF:0000107
(MGI:4838711|PMID:20610818)
Ensembl
RGD
PMID:20610818 GO_REF:0000107, MGI:4838711 NCBI chr  X:123,751,196...123,770,595
Ensembl chr  X:123,751,089...123,770,595
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:3718933|PMID:17658278) RGD PMID:17658278 MGI:3718933 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Per1 period circadian regulator 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5568183|PMID:24610784)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24610784 GO_REF:0000024, GO_REF:0000107, MGI:5568183 NCBI chr10:55,681,761...55,696,557
Ensembl chr10:55,687,050...55,695,994
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO (MGI:4881620|PMID:21035439) RGD PMID:21035439 MGI:4881620 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:78,380,813...78,384,047
Ensembl chr 5:78,380,816...78,384,047
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (MGI:5548017|PMID:24268575) RGD PMID:24268575 MGI:5548017 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISS
ISO
GO_REF:0000024
(MGI:3771455|PMID:17952069)
UniProt
RGD
PMID:17952069 GO_REF:0000024, MGI:3771455 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prdm14 PR/SET domain 14 ISO (MGI:5548017|PMID:24268575) RGD PMID:24268575 MGI:5548017 NCBI chr 5:5,710,076...5,730,560
Ensembl chr 5:5,710,392...5,730,560
JBrowse link
G Rara retinoic acid receptor, alpha ISO (PMID:19917671) RGD PMID:19917671 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:25411248) RGD PMID:25411248 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 ISO (PMID:23637611) RGD PMID:23637611 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Rxra retinoid X receptor alpha IEA
ISO
GO_REF:0000107
(MGI:3771455|PMID:17952069)
Ensembl
RGD
PMID:17952069 GO_REF:0000107, MGI:3771455 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Sbno1 strawberry notch homolog 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:37,593,692...37,650,761
Ensembl chr12:37,593,874...37,649,036
JBrowse link
G Sbno2 strawberry notch homolog 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:12,471,805...12,515,700
Ensembl chr 7:12,471,824...12,518,654
JBrowse link
G Smad3 SMAD family member 3 ISO (MGI:3696631|PMID:16224064) RGD PMID:16224064 MGI:3696631 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:5548017|PMID:24268575) RGD PMID:24268575 MGI:5548017 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Srf serum response factor ISO (MGI:3796777|PMID:18458156) RGD PMID:18458156 MGI:3796777 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO
ISS
(PMID:17344214)
GO_REF:0000024
RGD
UniProt
PMID:17344214 GO_REF:0000024 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit IBA
ISO
PMID:21873635
(MGI:3789777|PMID:18483221)
RGD PMID:18483221, PMID:21873635 MGI:3789777, RGD:13792537 NCBI chr10:67,325,101...67,371,588
Ensembl chr10:67,325,347...67,369,668
JBrowse link
G Thra thyroid hormone receptor alpha IEA
ISO
GO_REF:0000107
(MGI:3771455|PMID:17952069)
Ensembl
RGD
PMID:17952069 GO_REF:0000107, MGI:3771455 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Thrb thyroid hormone receptor beta IEA
ISO
GO_REF:0000107
(MGI:3771455|PMID:17952069)
Ensembl
RGD
PMID:17952069 GO_REF:0000107, MGI:3771455 NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282
JBrowse link
G Top1 DNA topoisomerase I IDA RGD PMID:1332866 RGD:1580856 NCBI chr 3:156,635,688...156,717,686
Ensembl chr 3:156,642,464...156,717,686
JBrowse link
G Tox thymocyte selection-associated high mobility group box IBA
ISO
PMID:21873635
(MGI:5632052|PMID:25527292)
RGD PMID:25527292, PMID:21873635 MGI:5632052, RGD:13792537 NCBI chr 5:19,892,698...20,189,721
Ensembl chr 5:19,892,698...20,189,721
JBrowse link
G Tox2 TOX high mobility group box family member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:159,569,329...159,694,756
Ensembl chr 3:159,569,363...159,694,756
JBrowse link
G Tox3 TOX high mobility group box family member 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:18,079,022...18,188,366
Ensembl chr19:18,079,094...18,188,330
JBrowse link
G Tox4 TOX high mobility group box family member 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,696,378...28,709,960
Ensembl chr15:28,695,912...28,709,957
JBrowse link
G Vax1 ventral anterior homeobox 1 ISO (MGI:3578573|PMID:15905411) RGD PMID:15905411 MGI:3578573 NCBI chr 1:280,334,897...280,338,813
Ensembl chr 1:280,334,897...280,338,813
JBrowse link
G Vax2 ventral anterior homeobox 2 IEA
ISO
GO_REF:0000107
(MGI:3578573|PMID:15905411)
Ensembl
RGD
PMID:15905411 GO_REF:0000107, MGI:3578573 NCBI chr 4:115,388,839...115,412,515
Ensembl chr 4:115,388,839...115,412,515
JBrowse link
G Wbp2 WW domain binding protein 2 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:23233354)
Ensembl
RGD
PMID:23233354, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:104,629,563...104,637,906
Ensembl chr10:104,630,573...104,637,823
JBrowse link
G Wbp2nl WBP2 N-terminal like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:123,531,657...123,548,574
Ensembl chr 7:123,531,682...123,548,081
JBrowse link
G Xbp1 X-box binding protein 1 ISO
ISS
(PMID:25280941)
GO_REF:0000024
RGD
UniProt
PMID:25280941 GO_REF:0000024 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Zic2 Zic family member 2 ISO (MGI:4833763|PMID:20676059) RGD PMID:20676059 MGI:4833763 NCBI chr15:108,908,366...108,913,812
Ensembl chr15:108,908,607...108,912,737
JBrowse link
chromatin insulator sequence binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC099444.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:78,263,866...78,265,056 JBrowse link
G Ctcf CCCTC-binding factor ISO
IBA
IEA
(PMID:17827499)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:17827499, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr19:37,600,151...37,649,674
Ensembl chr19:37,600,148...37,649,673
JBrowse link
G LOC103694540 zinc finger Y-chromosomal protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:182,497...222,212
Ensembl chr  Y:182,690...223,588
JBrowse link
G Repin1 replication initiator 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:78,232,454...78,237,498
Ensembl chr 4:78,233,332...78,236,781
JBrowse link
G Zfp711 zinc finger protein 711 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:84,062,363...84,095,888
Ensembl chr  X:84,064,427...84,096,617
JBrowse link
G Zfx zinc finger protein X-linked IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:63,158,368...63,204,971
Ensembl chr  X:63,158,976...63,204,530
JBrowse link
nucleosomal DNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053402.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:104,675,173...104,675,457 JBrowse link
G AABR07053884.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:132,282,628...132,282,879 JBrowse link
G AABR07057877.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:91,756,569...91,756,865 JBrowse link
G H1f0 H1 histone family, member 0 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G H1f1 H1.1 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,614,101...43,614,844
Ensembl chr17:43,614,101...43,614,844
JBrowse link
G H1f10 H1.10 linker histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,889,016...119,892,661
Ensembl chr 4:119,889,371...119,889,949
JBrowse link
G H1f2 H1.2 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,638,938...43,640,445
Ensembl chr17:43,639,749...43,640,387
JBrowse link
G H1f4 H1.4 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,734,461...43,735,120
Ensembl chr17:43,734,461...43,735,120
JBrowse link
G H1f5 H1.5 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,766,313...44,766,981
Ensembl chr17:44,766,313...44,766,981
JBrowse link
G H1f6 H1.6 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,675,190...43,675,934
Ensembl chr17:43,675,190...43,675,934
JBrowse link
G H1f8 H1.8 linker histone ISS
ISO
IBA
GO_REF:0000024
(MGI:5559660|PMID:22868987)
PMID:21873635
UniProt
RGD
PMID:22868987, PMID:21873635 GO_REF:0000024, MGI:5559660, RGD:13792537 NCBI chr 4:147,844,658...147,849,779
Ensembl chr 4:147,844,658...147,849,779
JBrowse link
G H2az1 H2A.Z variant histone 1 ISO (PMID:19633671) RGD PMID:19633671 NCBI chr 2:243,105,224...243,107,333
Ensembl chr 2:243,105,674...243,106,956
JBrowse link
G H3f3a H3.3 histone A ISO (PMID:19633671) RGD PMID:19633671 NCBI chr13:99,091,246...99,102,828
Ensembl chr13:99,091,763...99,101,208
JBrowse link
G H3f3b H3.3 histone B ISO (PMID:19633671) RGD PMID:19633671 NCBI chr10:104,573,666...104,575,890
Ensembl chr10:104,573,664...104,575,890
JBrowse link
G H4f3 H1.3 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,797,711...43,798,450
Ensembl chr17:43,797,721...43,798,383
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:82,775,691...82,776,487
Ensembl chr10:82,775,691...82,776,487
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:17078040)
GO_REF:0000024
RGD
UniProt
PMID:17078040 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:36,474,028...36,479,947
Ensembl chr11:36,474,840...36,479,868
JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:152,195,359...152,198,813
Ensembl chr 5:152,195,361...152,198,813
JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:90,628,203...90,665,055
Ensembl chr 8:90,628,209...90,664,554
JBrowse link
G Hmgn4 high mobility group nucleosomal binding domain 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:104,675,173...104,675,525 JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:80,134,557...80,142,902
Ensembl chr  X:80,134,557...80,142,902
JBrowse link
G Hmgn5b high mobility group nucleosome binding domain 5B IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:124,477,164...124,485,737
Ensembl chr 1:124,477,164...124,485,724
JBrowse link
G LOC100360316 hypothetical protein LOC100360316 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:33,942,592...33,943,784
Ensembl chr 5:152,195,361...152,198,813
JBrowse link
G LOC100361388 high-mobility group nucleosomal binding domain 2-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:132,282,628...132,285,148 JBrowse link
G LOC100363319 high mobility group nucleosomal binding domain 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:91,756,569...91,756,835 JBrowse link
G LOC100911295 non-histone chromosomal protein HMG-14-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:39,482,334...39,488,327
Ensembl chr11:39,482,408...39,488,326
JBrowse link
G Macroh2a1 macroH2A.1 histone ISO (PMID:20008927)
(MGI:5619474|PMID:18936163)
RGD PMID:18936163, PMID:20008927 MGI:5619474 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Rcc1 regulator of chromosome condensation 1 ISO (PMID:17435751) RGD PMID:17435751 NCBI chr 5:150,508,840...150,531,062
Ensembl chr 5:150,509,040...150,525,254
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20457
    binding 17224
      chromatin binding 721
        chromatin DNA binding 107
          chromatin insulator sequence binding 6
          nucleosomal DNA binding 29
Path 2
Term Annotations click to browse term
  molecular_function 20457
    binding 17224
      organic cyclic compound binding 5830
        nucleic acid binding 3659
          DNA binding 2251
            chromatin DNA binding 107
              chromatin insulator sequence binding 6
              nucleosomal DNA binding 29
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.