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ONTOLOGY REPORT - ANNOTATIONS


Term:PcG protein complex
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Accession:GO:0031519 term browser browse the term
Definition:A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.
Synonyms:exact_synonym: Polycomb Group protein complex


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PcG protein complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07025825.1 RGD:13792537
G Bmi1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 17 85,360,439 85,370,283 RGD:1624291
G Cbx2 chromobox 2 JBrowse link 10 108,132,105 108,140,935 RGD:1624291
G Cbx4 chromobox 4 JBrowse link 10 108,190,947 108,196,455 RGD:1624291
G Cbx6 chromobox 6 JBrowse link 7 121,047,996 121,058,109 RGD:1624291
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:1624291
RGD:1600115
G Cbx8 chromobox 8 JBrowse link 10 108,148,073 108,150,511 RGD:1624291
G Csnk2a1 casein kinase 2 alpha 1 JBrowse link 3 147,713,808 147,760,375 RGD:1624291
RGD:1600115
G Csnk2a2 casein kinase 2 alpha 2 JBrowse link 19 9,972,537 10,012,043 RGD:1624291
RGD:13792537
G Csnk2b casein kinase 2 beta JBrowse link 20 5,108,692 5,113,675 RGD:1624291
RGD:1600115
G Kdm2b lysine demethylase 2B JBrowse link 12 39,021,924 39,161,954 RGD:1624291
G Pcgf1 polycomb group ring finger 1 JBrowse link 4 113,911,129 113,913,718 RGD:1624291
RGD:1600115
G Pcgf2 polycomb group ring finger 2 JBrowse link 10 85,631,829 85,642,591 RGD:1624291
G Pcgf3 polycomb group ring finger 3 JBrowse link 14 2,247,805 2,297,155 RGD:1624291
RGD:13792537
G Pcgf5 polycomb group ring finger 5 JBrowse link 1 254,974,688 255,090,925 RGD:1624291
RGD:13792537
G Pcgf6 polycomb group ring finger 6 JBrowse link 1 266,811,418 266,831,022 RGD:1624291
RGD:13792537
RGD:1600115
G Phc1 polyhomeotic homolog 1 JBrowse link 4 155,093,947 155,118,838 RGD:1624291
G Phc2 polyhomeotic homolog 2 JBrowse link 5 146,832,552 146,931,444 RGD:1624291
G Phc3 polyhomeotic homolog 3 JBrowse link 2 116,028,735 116,103,227 RGD:1624291
G Ring1 ring finger protein 1 JBrowse link 20 3,812,287 3,815,834 RGD:1600115
RGD:13792537
RGD:1624291
G Rnf2 ring finger protein 2 JBrowse link 13 68,829,714 68,859,920 RGD:1600115
RGD:13792537
RGD:1624291
G Rybp RING1 and YY1 binding protein JBrowse link 4 132,689,623 132,740,823 RGD:1624291
G Scml2 Scm polycomb group protein like 2 JBrowse link X 35,305,235 35,431,271 RGD:1624291
G Skp1 S-phase kinase-associated protein 1 JBrowse link 10 37,594,578 37,609,498 RGD:1624291
RGD:1600115
G Ubap2l ubiquitin associated protein 2-like JBrowse link 2 189,334,341 189,400,334 RGD:1624291
G Yy1 YY1 transcription factor JBrowse link 6 132,702,443 132,726,848 RGD:1624291
RGD:13792537
G Yy2 YY2 transcription factor JBrowse link X 40,285,923 40,289,545 RGD:13792537
ESC/E(Z) complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aebp2 AE binding protein 2 JBrowse link 4 174,799,378 174,863,260 RGD:1624291
G Dnmt3l DNA methyltransferase 3 like JBrowse link 20 11,344,513 11,359,090 RGD:1624291
RGD:1600115
G Eed embryonic ectoderm development JBrowse link 1 154,189,252 154,216,340 RGD:1624291
RGD:13792537
G Epop elongin BC and polycomb repressive complex 2 associated protein JBrowse link 10 85,573,369 85,574,889 RGD:1624291
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit JBrowse link 10 89,104,026 89,139,978 RGD:1624291
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:1624291
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:1624291
G Jarid2 jumonji and AT-rich interaction domain containing 2 JBrowse link 17 20,183,440 20,365,219 RGD:1624291
G Mtf2 metal response element binding transcription factor 2 JBrowse link 14 2,656,776 2,701,027 RGD:1624291
RGD:13792537
G Phf1 PHD finger protein 1 JBrowse link 20 5,526,926 5,531,940 RGD:1624291
RGD:13792537
G Phf19 PHD finger protein 19 JBrowse link 3 13,957,136 13,978,283 RGD:1624291
RGD:13792537
G Rbbp4 RB binding protein 4, chromatin remodeling factor JBrowse link 5 147,499,880 147,535,240 RGD:1624291
G Rbbp7 RB binding protein 7, chromatin remodeling factor JBrowse link X 33,648,682 33,665,821 RGD:1600115
RGD:1624291
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
RGD:1600115
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link 10 67,325,101 67,371,588 RGD:1624291
RGD:13792537
G Trim37 tripartite motif-containing 37 JBrowse link 10 74,436,165 74,568,636 RGD:1624291
PR-DUB complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asxl1 ASXL transcriptional regulator 1 JBrowse link 3 148,832,231 148,902,356 RGD:1624291
RGD:13792537
G Asxl2 ASXL transcriptional regulator 2 JBrowse link 6 27,835,346 27,919,285 RGD:13792537
G Asxl3 ASXL transcriptional regulator 3 JBrowse link 18 13,322,148 13,496,230 RGD:13792537
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:1600115
RGD:1624291
PRC1 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmi1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 17 85,360,439 85,370,283 RGD:1624291
RGD:13792537
G Cbx2 chromobox 2 JBrowse link 10 108,132,105 108,140,935 RGD:1624291
G Cbx4 chromobox 4 JBrowse link 10 108,190,947 108,196,455 RGD:1624291
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:1624291
RGD:1600115
G Cbx8 chromobox 8 JBrowse link 10 108,148,073 108,150,511 RGD:1624291
G LOC103692167 polycomb group RING finger protein 1 JBrowse link 4 114,776,680 114,779,447 RGD:13792537
G Pcgf1 polycomb group ring finger 1 JBrowse link 4 113,911,129 113,913,718 RGD:13792537
G Pcgf2 polycomb group ring finger 2 JBrowse link 10 85,631,829 85,642,591 RGD:1624291
RGD:13792537
G Pcgf3 polycomb group ring finger 3 JBrowse link 14 2,247,805 2,297,155 RGD:13792537
G Pcgf5 polycomb group ring finger 5 JBrowse link 1 254,974,688 255,090,925 RGD:13792537
G Pcgf6 polycomb group ring finger 6 JBrowse link 1 266,811,418 266,831,022 RGD:1624291
RGD:13792537
RGD:1600115
G Phc1 polyhomeotic homolog 1 JBrowse link 4 155,093,947 155,118,838 RGD:1624291
G Phc2 polyhomeotic homolog 2 JBrowse link 5 146,832,552 146,931,444 RGD:1624291
G Phc3 polyhomeotic homolog 3 JBrowse link 2 116,028,735 116,103,227 RGD:1624291
G RGD1562871 similar to BMI1-like protein JBrowse link X 79,546,624 79,547,767 RGD:13792537
G Ring1 ring finger protein 1 JBrowse link 20 3,812,287 3,815,834 RGD:1600115
RGD:1624291
G Rnf2 ring finger protein 2 JBrowse link 13 68,829,714 68,859,920 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19843
    protein-containing complex 5779
      PcG protein complex 49
        ESC/E(Z) complex 16
        PR-DUB complex 4
        PRC1 complex 17
Path 2
Term Annotations click to browse term
  cellular_component 19843
    cellular anatomical entity 19457
      organelle 12557
        membrane-bounded organelle 10879
          intracellular membrane-bounded organelle 9976
            nucleus 6783
              PcG protein complex 49
                ESC/E(Z) complex 16
                PR-DUB complex 4
                PRC1 complex 17
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.