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ONTOLOGY REPORT - ANNOTATIONS


Term:wybutosine metabolic process
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Accession:GO:0031590 term browser browse the term
Definition:The chemical reactions and pathways involving wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
Synonyms:exact_synonym: wybutosine metabolism;   yW metabolic process;   yW metabolism


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wybutosine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lcmt2 leucine carboxyl methyltransferase 2 JBrowse link 3 113,089,646 113,091,770 RGD:13792537
G Trmt12 tRNA methyltransferase 12 JBrowse link 7 98,748,547 98,750,173 RGD:13792537
G Tyw3 tRNA-yW synthesizing protein 3 homolog JBrowse link 2 260,861,825 260,884,270 RGD:13792537
G Tyw5 tRNA-yW synthesizing protein 5 JBrowse link 9 64,077,841 64,096,265 RGD:1624291
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11638
      nitrogen compound metabolic process 9952
        organonitrogen compound metabolic process 6903
          wybutosine metabolic process 4
            wybutosine biosynthetic process 4
Path 2
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11638
      organic substance metabolic process 11027
        carbohydrate derivative metabolic process 1009
          glycosyl compound metabolic process 124
            wybutosine metabolic process 4
              wybutosine biosynthetic process 4
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.