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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of lipopolysaccharide-mediated signaling pathway
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Accession:GO:0031664 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.
Synonyms:exact_synonym: regulation of LPS-mediated signaling pathway;   regulation of lipopolysaccharide-mediated signalling pathway


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regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd55 CD55 molecule (Cromer blood group) JBrowse link 13 47,125,156 47,153,557 RGD:1624291
G Cd84 CD84 molecule JBrowse link 13 90,241,369 90,283,625 RGD:1624291
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:1600115
RGD:1624291
G Trim5 tripartite motif-containing 5 JBrowse link 1 169,446,774 169,463,760 RGD:1624291
G Tut4 terminal uridylyl transferase 4 JBrowse link 5 128,063,880 128,168,726 RGD:1624291
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cactin cactin, spliceosome C complex subunit JBrowse link 7 11,258,526 11,266,509 RGD:1624291
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Nfkbil1 NFKB inhibitor like 1 JBrowse link 20 4,823,590 4,839,202 RGD:1624291
RGD:1600115
G Nlrp1b NLR family, pyrin domain containing 1B JBrowse link 10 57,755,957 57,847,867 RGD:1624291
G Prdm1 PR/SET domain 1 JBrowse link 20 49,464,921 49,556,623 RGD:1624291
G Prdx2 peroxiredoxin 2 JBrowse link 19 26,084,816 26,090,095 RGD:1624291
RGD:1600115
G Trib1 tribbles pseudokinase 1 JBrowse link 7 99,954,492 99,961,026 RGD:1624291
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp6 bone morphogenetic protein 6 JBrowse link 17 26,955,142 27,112,820 RGD:1624291
G Cd180 CD180 molecule JBrowse link 2 32,820,275 32,833,223 RGD:1624291
RGD:13792537
G Ly86 lymphocyte antigen 86 JBrowse link 17 28,104,535 28,191,447 RGD:1624291
G Ly96 lymphocyte antigen 96 JBrowse link 5 1,972,212 1,989,448 RGD:1624291
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1624291
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:1600115
RGD:1624291
G Sash1 SAM and SH3 domain containing 1 JBrowse link 1 2,782,905 2,950,749 RGD:1624291
G Scimp SLP adaptor and CSK interacting membrane protein JBrowse link 10 57,415,429 57,436,412 RGD:1624291
G Traf6 TNF receptor associated factor 6 JBrowse link 3 91,252,829 91,271,607 RGD:1624291
tolerance induction to lipopolysaccharide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acod1 aconitate decarboxylase 1 JBrowse link 15 93,612,968 93,622,322 RGD:1624291
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19576
    signaling 7536
      signal transduction 6929
        regulation of signal transduction 2922
          regulation of lipopolysaccharide-mediated signaling pathway 23
            negative regulation of lipopolysaccharide-mediated signaling pathway + 9
            positive regulation of lipopolysaccharide-mediated signaling pathway 9
Path 2
Term Annotations click to browse term
  biological_process 19576
    response to stimulus 10487
      response to biotic stimulus 1649
        response to external biotic stimulus 1617
          response to other organism 1613
            response to bacterium 1015
              response to molecule of bacterial origin 538
                cellular response to molecule of bacterial origin 322
                  cellular response to lipopolysaccharide 311
                    lipopolysaccharide-mediated signaling pathway 56
                      regulation of lipopolysaccharide-mediated signaling pathway 23
                        negative regulation of lipopolysaccharide-mediated signaling pathway + 9
                        positive regulation of lipopolysaccharide-mediated signaling pathway 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.