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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to nutrient levels
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Accession:GO:0031669 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.


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cellular response to nutrient levels term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd68 Cd68 molecule ISO (MGI:MGI:6274946|PMID:16157452) RGD PMID:16157452 MGI:MGI:6274946 NCBI chr10:56,268,726...56,270,605
Ensembl chr10:56,268,720...56,270,640
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Fam107a family with sequence similarity 107, member A IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:6162291|PMID:21969592)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21969592 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6162291 NCBI chr15:18,399,145...18,415,959
Ensembl chr15:18,399,515...18,415,965
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20643106 RGD:4145376 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Il6 interleukin 6 IEP RGD PMID:23079940 RGD:11062063 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 IDA PMID:19077057 UniProt PMID:19077057 RGD:10047372 NCBI chr 3:163,850,785...163,935,610
Ensembl chr 3:163,850,785...163,935,617
JBrowse link
G Lcn2 lipocalin 2 IEP serum deprivation RGD PMID:17356516 RGD:2303047 NCBI chr 3:11,414,189...11,417,534
Ensembl chr 3:11,414,186...11,417,546
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO
ISS
(MGI:MGI:5285135|PMID:21258367)
GO_REF:0000024
RGD
UniProt
PMID:21258367 GO_REF:0000024, MGI:MGI:5285135 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO
ISS
(MGI:MGI:5285135|PMID:21258367)
GO_REF:0000024
RGD
UniProt
PMID:21258367 GO_REF:0000024, MGI:MGI:5285135 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO
ISS
(MGI:MGI:5285135|PMID:21258367)
GO_REF:0000024
RGD
UniProt
PMID:21258367 GO_REF:0000024, MGI:MGI:5285135 NCBI chr 5:124,568,845...124,642,569
Ensembl chr 5:124,574,079...124,642,569
JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 ISO (PMID:12150925) RGD PMID:12150925 NCBI chr10:108,750,620...109,058,691
Ensembl chr10:108,750,620...109,058,691
JBrowse link
G Txn2 thioredoxin 2 IEP Choline-deprived diet. RGD PMID:18578693 RGD:2306156 NCBI chr 7:119,144,350...119,158,173
Ensembl chr 7:119,144,351...119,158,201
JBrowse link
G Ucn2 urocortin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:117,727,216...117,728,765
Ensembl chr 8:117,727,877...117,728,764
JBrowse link
G Ucn3 urocortin 3 IEP
IBA
High-fat diet
PMID:21873635
RGD
GO_Central
PMID:17360501, PMID:21873635 RGD:2306172, RGD:13792537 NCBI chr17:69,959,879...69,966,532
Ensembl chr17:69,960,160...69,966,099
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:5285135|PMID:21258367) RGD PMID:21258367 MGI:MGI:5285135 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
cellular response to amino acid starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf3 activating transcription factor 3 ISO (MGI:MGI:3722921|PMID:14729979) RGD PMID:14729979 MGI:MGI:3722921 NCBI chr13:109,817,892...109,849,632
Ensembl chr13:109,817,728...109,849,632
JBrowse link
G Atf4 activating transcription factor 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:3582244|PMID:11106749), (MGI:MGI:3722921|PMID:14729979), (MGI:MGI:3798818|PMID:12667446)
UniProt
RGD
PMID:11106749, PMID:12667446, PMID:14729979 GO_REF:0000024, MGI:MGI:3582244, MGI:MGI:3722921, MGI:MGI:3798818 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Becn1 beclin 1 IEP RGD PMID:22835012 RGD:11561942 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Bmt2 base methyltransferase of 25S rRNA 2 homolog ISO (PMID:29123071) RGD PMID:29123071 NCBI chr 4:40,064,131...40,136,074
Ensembl chr 4:40,063,932...40,136,061
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (PMID:26102367)
(MGI:MGI:5700278|PMID:26102367)
RGD PMID:26102367 MGI:MGI:5700278 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Dap death-associated protein ISO
IBA
(PMID:20537536)
PMID:21873635
RGD PMID:20537536, PMID:21873635 RGD:13792537 NCBI chr 2:84,275,884...84,328,998
Ensembl chr 2:84,275,884...84,328,998
JBrowse link
G Dapl1 death associated protein-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:45,538,408...45,559,281
Ensembl chr 3:45,538,797...45,559,331
JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ISO
IBA
(PMID:23723238)
PMID:21873635
RGD PMID:23723238, PMID:21873635 RGD:13792537 NCBI chr14:83,089,000...83,219,576
Ensembl chr14:83,089,000...83,219,464
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 IEA
ISO
GO_REF:0000107
(PMID:25329545)
Ensembl
RGD
PMID:25329545 GO_REF:0000107 NCBI chr 6:1,428,845...1,466,193
Ensembl chr 6:1,428,834...1,466,201
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO
ISS
(PMID:25329545)
GO_REF:0000024
RGD
UniProt
PMID:25329545 GO_REF:0000024 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (PMID:25329545)
(MGI:MGI:3722921|PMID:14729979), (MGI:MGI:5576818|PMID:24333428)
RGD PMID:14729979, PMID:24333428, PMID:25329545 MGI:MGI:3722921, MGI:MGI:5576818 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ISO
ISS
(MGI:MGI:3582244|PMID:11106749)
GO_REF:0000024
RGD
UniProt
PMID:11106749 GO_REF:0000024, MGI:MGI:3582244 NCBI chr 6:102,048,372...102,073,041
Ensembl chr 6:102,048,372...102,073,041
JBrowse link
G Fas Fas cell surface death receptor ISO (PMID:11096076) RGD PMID:11096076 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Flcn folliculin ISO
ISS
(PMID:24095279), (PMID:27113757), (PMID:31672913)
GO_REF:0000024
RGD
UniProt
PMID:24095279, PMID:27113757, PMID:31672913 GO_REF:0000024 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Gcn1 GCN1 activator of EIF2AK4 ISO (MGI:MGI:5576818|PMID:24333428) RGD PMID:24333428 MGI:MGI:5576818 NCBI chr12:46,728,684...46,789,696
Ensembl chr12:46,728,699...46,789,726
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IDA RGD PMID:19273590 RGD:9999430 NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776
JBrowse link
G Impact impact RWD domain protein ISO
ISS
(MGI:MGI:5576818|PMID:24333428)
GO_REF:0000024
RGD
UniProt
PMID:24333428 GO_REF:0000024, MGI:MGI:5576818 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 4:161,730,643...161,744,281
Ensembl chr 4:161,730,641...161,743,896
JBrowse link
G Kptn kaptin (actin binding protein) ISO
IBA
(PMID:28199306)
PMID:21873635
RGD PMID:28199306, PMID:21873635 RGD:13792537 NCBI chr 1:78,015,714...78,016,508
Ensembl chr 1:78,015,722...78,023,676
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 ISO (PMID:22424946) RGD PMID:22424946 NCBI chr18:36,524,013...36,579,471
Ensembl chr18:36,524,007...36,579,403
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IEP RGD PMID:22835012 RGD:11561942 NCBI chr 3:150,801,289...150,802,935
Ensembl chr 3:150,801,289...150,802,935
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 ISO (PMID:11096076) RGD PMID:11096076 NCBI chr 1:15,412,603...15,613,752
Ensembl chr 1:15,412,603...15,613,746
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO (PMID:11096076) RGD PMID:11096076 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO (PMID:11096076) RGD PMID:11096076 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IEA
ISO
GO_REF:0000107
(PMID:11096076)
Ensembl
RGD
PMID:11096076 GO_REF:0000107 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mios meiosis regulator for oocyte development ISO
IBA
(PMID:23723238)
PMID:21873635
RGD PMID:23723238, PMID:21873635 RGD:13792537 NCBI chr 4:34,238,370...34,264,015
Ensembl chr 4:34,237,762...34,264,015
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO
ISS
(PMID:22343943), (PMID:22424946), (PMID:22576015), (PMID:22692423)
GO_REF:0000024
RGD
UniProt
PMID:22343943, PMID:22424946, PMID:22576015, PMID:22692423 GO_REF:0000024 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit ISO
IBA
(PMID:23723238)
PMID:21873635
RGD PMID:23723238, PMID:21873635 RGD:13792537 NCBI chr 8:116,297,950...116,301,123
Ensembl chr 8:116,297,950...116,301,122
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit ISO
IBA
(PMID:23723238)
PMID:21873635
RGD PMID:23723238, PMID:21873635 RGD:13792537 NCBI chr10:15,620,824...15,661,332
Ensembl chr10:15,620,871...15,661,331
JBrowse link
G Prkd1 protein kinase D1 ISO (PMID:22095288) RGD PMID:22095288 NCBI chr 6:71,035,017...71,349,531
Ensembl chr 6:71,035,332...71,349,249
JBrowse link
G RGD1565498 similar to Hypothetical protein LOC270802 ISO
IBA
(PMID:28199306)
PMID:21873635
RGD PMID:28199306, PMID:21873635 RGD:13792537 NCBI chr 7:63,922,871...63,937,721
Ensembl chr 7:63,922,879...63,936,385
JBrowse link
G Rnf152 ring finger protein 152 ISO
IBA
ISS
(PMID:25936802)
PMID:21873635
GO_REF:0000024
(MGI:MGI:5644195|PMID:25936802)
RGD
UniProt
PMID:25936802, PMID:21873635 GO_REF:0000024, MGI:MGI:5644195, RGD:13792537 NCBI chr13:25,183,295...25,262,785
Ensembl chr13:25,186,106...25,262,469
JBrowse link
G Rpl17 ribosomal protein L17 IEP RGD PMID:8144559 RGD:1304507 NCBI chr18:70,969,733...70,972,839
Ensembl chr18:70,970,596...70,975,494
JBrowse link
G Rps25 ribosomal protein s25 IEP RGD PMID:8144559 RGD:1304507 NCBI chr 8:48,727,346...48,729,722
Ensembl chr 8:48,727,618...48,729,580
JBrowse link
G Rraga Ras-related GTP binding A ISO
ISS
(PMID:25936802)
GO_REF:0000024
RGD
UniProt
PMID:25936802 GO_REF:0000024 NCBI chr 5:104,941,067...104,942,662
Ensembl chr 5:104,941,066...104,942,662
JBrowse link
G RragB Ras-related GTP binding B ISO UniProtKB:Q9HB90 (PMID:23723238) RGD PMID:23723238 NCBI chr  X:19,085,913...19,135,049
Ensembl chr  X:19,336,372...19,369,746
Ensembl chr  X:19,336,372...19,369,746
JBrowse link
G Rragc Ras-related GTP binding C ISO UniProtKB:Q5VZM2 (PMID:23723238) RGD PMID:23723238 NCBI chr 5:141,572,536...141,590,784
Ensembl chr 5:141,572,536...141,590,781
JBrowse link
G Seh1l SEH1-like nucleoporin ISO (PMID:23723238) RGD PMID:23723238 NCBI chr18:63,545,150...63,568,101 JBrowse link
G Sesn1 sestrin 1 ISO (PMID:25263562) RGD PMID:25263562 NCBI chr20:46,667,116...46,758,306
Ensembl chr20:46,667,121...46,758,305
JBrowse link
G Sesn2 sestrin 2 ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 5:150,684,891...150,703,846
Ensembl chr 5:150,684,133...150,704,117
JBrowse link
G Sesn3 sestrin 3 ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 8:12,823,060...12,878,749
Ensembl chr 8:12,823,155...12,872,705
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 ISO (PMID:21068542) RGD PMID:21068542 NCBI chr 2:250,709,812...250,744,216
Ensembl chr 2:250,709,439...250,744,196
JBrowse link
G Slc38a2 solute carrier family 38, member 2 IEP RGD PMID:11311116 RGD:68721 NCBI chr 7:138,088,654...138,100,869
Ensembl chr 7:138,088,649...138,100,841
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO (PMID:28199306), (PMID:28199315) RGD PMID:28199306, PMID:28199315 NCBI chr 5:137,192,120...137,238,384
Ensembl chr 5:137,190,875...137,238,354
JBrowse link
G Tfeb transcription factor EB ISO (PMID:22343943), (PMID:22576015), (PMID:22692423) RGD PMID:22343943, PMID:22576015, PMID:22692423 NCBI chr 9:15,208,141...15,264,101
Ensembl chr 9:15,207,822...15,214,596
JBrowse link
G Ucp2 uncoupling protein 2 IEP glutamine RGD PMID:18692019 RGD:7240714 NCBI chr 1:165,506,375...165,512,744
Ensembl chr 1:165,506,361...165,512,744
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO UniProtKB:O70405 (MGI:MGI:5607224|PMID:21855797) RGD PMID:21855797 MGI:MGI:5607224 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Wdr24 WD repeat domain 24 ISO (PMID:23723238) RGD PMID:23723238 NCBI chr10:15,191,078...15,195,860
Ensembl chr10:15,191,078...15,195,860
JBrowse link
G Wdr59 WD repeat domain 59 ISO (PMID:23723238) RGD PMID:23723238 NCBI chr19:43,651,686...43,714,391
Ensembl chr19:43,651,148...43,714,418
JBrowse link
cellular response to calcium ion starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:9878749 RGD:9999163 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
cellular response to copper ion starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper containing 1 IDA
ISO
PMID:9399025
(PMID:9399025)
RGD PMID:9399025, PMID:9399025 RGD:8553761 NCBI chr 4:78,496,043...78,515,582
Ensembl chr 4:78,496,043...78,515,584
JBrowse link
cellular response to folic acid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha ISO (PMID:14722620) RGD PMID:14722620 NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592
JBrowse link
G Folr2 folate receptor beta IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:166,915,045...166,933,377
Ensembl chr 1:166,915,045...166,919,302
JBrowse link
cellular response to glucose starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP
ISO
(PMID:10085239) RGD PMID:10085239, PMID:10085239 RGD:2315999 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
G Atf4 activating transcription factor 4 ISO (PMID:22915762) RGD PMID:22915762 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Atg14 autophagy related 14 ISO
ISS
(MGI:MGI:5619439|PMID:23332761)
GO_REF:0000024
RGD
UniProt
PMID:23332761 GO_REF:0000024, MGI:MGI:5619439 NCBI chr15:24,343,418...24,374,776
Ensembl chr15:24,343,314...24,374,753
JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO
IEA
(MGI:MGI:77298|PMID:7595537)
GO_REF:0000107
RGD
Ensembl
PMID:7595537 GO_REF:0000107, MGI:MGI:77298 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Becn1 beclin 1 ISO
ISS
(MGI:MGI:5619439|PMID:23332761)
GO_REF:0000024
RGD
UniProt
PMID:23332761 GO_REF:0000024, MGI:MGI:5619439 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 ISO
ISS
(MGI:MGI:5607242|PMID:17612490)
GO_REF:0000024
RGD
UniProt
PMID:17612490 GO_REF:0000024, MGI:MGI:5607242 NCBI chr12:12,403,385...12,409,103
Ensembl chr12:12,403,385...12,407,561
JBrowse link
G Brsk1 BR serine/threonine kinase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:72,701,281...72,727,061
Ensembl chr 1:72,701,610...72,727,112
JBrowse link
G Brsk2 BR serine/threonine kinase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:214,918,757...214,940,883
Ensembl chr 1:214,927,172...214,947,624
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 IDA PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr10:15,984,520...16,047,209
Ensembl chr10:15,987,921...16,046,033
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO (PMID:22915762)
(MGI:MGI:5607215|PMID:22915762)
RGD PMID:22915762 MGI:MGI:5607215 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Foxo3 forkhead box O3 ISO (PMID:29445193) RGD PMID:29445193 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Gck glucokinase IMP down-regulation of the counterregulatory response to insulin-induced hypoglycemia RGD PMID:18292346 RGD:2301900 NCBI chr14:86,149,146...86,191,589
Ensembl chr14:86,148,928...86,190,659
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family, member 1A ISO (MGI:MGI:3654896|PMID:16815968), (MGI:MGI:5643884|PMID:25683712) RGD PMID:16815968, PMID:25683712 MGI:MGI:3654896, MGI:MGI:5643884 NCBI chr 8:130,482,492...130,491,888
Ensembl chr 8:130,482,493...130,491,998
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO
IEA
(PMID:25689357)
GO_REF:0000107
RGD
Ensembl
PMID:25689357 GO_REF:0000107 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO (PMID:10085239) RGD PMID:10085239 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Impact impact RWD domain protein ISO
ISS
(MGI:MGI:5576818|PMID:24333428)
GO_REF:0000024
RGD
UniProt
PMID:24333428 GO_REF:0000024, MGI:MGI:5576818 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 4:161,730,643...161,744,281
Ensembl chr 4:161,730,641...161,743,896
JBrowse link
G Kptn kaptin (actin binding protein) ISO
IEA
(PMID:28199306)
GO_REF:0000107
RGD
Ensembl
PMID:28199306 GO_REF:0000107 NCBI chr 1:78,015,714...78,016,508
Ensembl chr 1:78,015,722...78,023,676
JBrowse link
G Mtmr3 myotubularin related protein 3 ISO
IEA
(PMID:25578879)
GO_REF:0000107
RGD
Ensembl
PMID:25578879 GO_REF:0000107 NCBI chr14:84,701,559...84,820,487
Ensembl chr14:84,701,559...84,820,415
JBrowse link
G Mybbp1a MYB binding protein 1a ISO (PMID:21471221) RGD PMID:21471221 NCBI chr10:59,000,400...59,010,794
Ensembl chr10:59,000,397...59,010,903
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 ISO (MGI:MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:MGI:5616326 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Nim1k NIM1 serine/threonine protein kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:52,448,746...52,494,137
Ensembl chr 2:52,448,715...52,492,509
JBrowse link
G Nuak1 NUAK family kinase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:25,039,336...25,111,118
Ensembl chr 7:25,039,335...25,113,664
JBrowse link
G Nuak2 NUAK family kinase 2 IDA
IBA
ISO
PMID:15893879
PMID:21873635
(PMID:14575707)
RGD PMID:14575707, PMID:15893879, PMID:21873635 RGD:8553633, RGD:13792537 NCBI chr13:49,092,306...49,109,055
Ensembl chr13:49,092,306...49,109,050
JBrowse link
G Pick1 protein interacting with PRKCA 1 IMP PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr 7:120,465,472...120,484,824
Ensembl chr 7:120,465,130...120,484,840
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 ISO
ISS
(MGI:MGI:5619439|PMID:23332761)
GO_REF:0000024
RGD
UniProt
PMID:23332761 GO_REF:0000024, MGI:MGI:5619439 NCBI chr18:22,964,121...23,047,896
Ensembl chr18:22,964,210...23,047,895
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 ISO
ISS
(MGI:MGI:5619439|PMID:23332761)
GO_REF:0000024
RGD
UniProt
PMID:23332761 GO_REF:0000024, MGI:MGI:5619439 NCBI chr 8:114,300,248...114,350,686
Ensembl chr 8:114,300,257...114,350,681
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO (PMID:21145489) RGD PMID:21145489 NCBI chr18:62,159,128...62,179,635
Ensembl chr18:62,174,670...62,181,102
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO
ISS
(MGI:MGI:5285135|PMID:21258367)
GO_REF:0000024
RGD
UniProt
PMID:21258367 GO_REF:0000024, MGI:MGI:5285135 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:5285135|PMID:21258367), (MGI:MGI:5619439|PMID:23332761)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21258367, PMID:23332761 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5285135, MGI:MGI:5619439 NCBI chr 5:124,568,845...124,642,569
Ensembl chr 5:124,574,079...124,642,569
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,489,499...140,506,925
Ensembl chr 7:140,489,492...140,546,908
JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:6,559,153...6,799,888
Ensembl chr 4:6,559,545...6,799,632
JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:81,999,368...82,008,620
Ensembl chr 9:81,999,376...82,008,620
JBrowse link
G Prkcd protein kinase C, delta IEP RGD PMID:17728702 RGD:1642520 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G RGD1565498 similar to Hypothetical protein LOC270802 ISO
IBA
(PMID:28199306)
PMID:21873635
RGD PMID:28199306, PMID:21873635 RGD:13792537 NCBI chr 7:63,922,871...63,937,721
Ensembl chr 7:63,922,879...63,936,385
JBrowse link
G Rrp8 ribosomal RNA processing 8 ISO
IBA
(PMID:21471221)
PMID:21873635
RGD PMID:21471221, PMID:21873635 RGD:13792537 NCBI chr 1:170,574,670...170,578,693
Ensembl chr 1:170,574,349...170,579,616
JBrowse link
G Sesn1 sestrin 1 ISO (PMID:25263562) RGD PMID:25263562 NCBI chr20:46,667,116...46,758,306
Ensembl chr20:46,667,121...46,758,305
JBrowse link
G Sesn2 sestrin 2 ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 5:150,684,891...150,703,846
Ensembl chr 5:150,684,133...150,704,117
JBrowse link
G Sesn3 sestrin 3 ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 8:12,823,060...12,878,749
Ensembl chr 8:12,823,155...12,872,705
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 ISO (PMID:21068542) RGD PMID:21068542 NCBI chr 2:250,709,812...250,744,216
Ensembl chr 2:250,709,439...250,744,196
JBrowse link
G Sik1 salt-inducible kinase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:10,670,747...10,680,279
Ensembl chr20:10,668,411...10,680,283
JBrowse link
G Sik2 salt-inducible kinase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,309,005...55,408,608
Ensembl chr 8:55,308,757...55,408,464
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO (MGI:MGI:1932248|PMID:11259273) RGD PMID:11259273 MGI:MGI:1932248 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO (PMID:28199306), (PMID:28199315) RGD PMID:28199306, PMID:28199315 NCBI chr 5:137,192,120...137,238,384
Ensembl chr 5:137,190,875...137,238,354
JBrowse link
G Tbl2 transducin (beta)-like 2 ISO (PMID:25393282) RGD PMID:25393282 NCBI chr12:24,565,843...24,578,855
Ensembl chr12:24,565,849...24,578,786
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:14744935), (PMID:21471221) RGD PMID:14744935, PMID:21471221 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Upp1 uridine phosphorylase 1 IEP RGD PMID:18457515 RGD:2317094 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:18262491 RGD:2324645 NCBI chr 1:245,236,819...245,273,688
Ensembl chr 1:245,237,736...245,269,205
JBrowse link
G Xbp1 X-box binding protein 1 ISO
ISS
(MGI:MGI:5607242|PMID:17612490)
GO_REF:0000024
RGD
UniProt
PMID:17612490 GO_REF:0000024, MGI:MGI:5607242 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO (MGI:MGI:5297619|PMID:21971051) RGD PMID:21971051 MGI:MGI:5297619 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
cellular response to iron ion starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator IEP RGD PMID:16208485 RGD:1582698 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin IEP RGD PMID:2859894 RGD:9585689 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Lep leptin IEP RGD PMID:20400526 RGD:5128594 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
cellular response to leucine starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:5494763|PMID:23447528) RGD PMID:23447528 MGI:MGI:5494763 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Gcn1 GCN1 activator of EIF2AK4 ISO (MGI:MGI:5494763|PMID:23447528) RGD PMID:23447528 MGI:MGI:5494763 NCBI chr12:46,728,684...46,789,696
Ensembl chr12:46,728,699...46,789,726
JBrowse link
G Impact impact RWD domain protein ISO
ISS
(MGI:MGI:5494763|PMID:23447528)
GO_REF:0000024
RGD
UniProt
PMID:23447528 GO_REF:0000024, MGI:MGI:5494763 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 ISO (PMID:22424946) RGD PMID:22424946 NCBI chr18:36,524,013...36,579,471
Ensembl chr18:36,524,007...36,579,403
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:22424946) RGD PMID:22424946 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G RragB Ras-related GTP binding B ISO (PMID:22424946) RGD PMID:22424946 NCBI chr  X:19,085,913...19,135,049
Ensembl chr  X:19,336,372...19,369,746
Ensembl chr  X:19,336,372...19,369,746
JBrowse link
G Rragd Ras-related GTP binding D ISO (PMID:22424946) RGD PMID:22424946 NCBI chr 5:48,224,994...48,260,691
Ensembl chr 5:48,224,994...48,260,685
JBrowse link
G Sesn1 sestrin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:46,667,116...46,758,306
Ensembl chr20:46,667,121...46,758,305
JBrowse link
G Sesn2 sestrin 2 ISO
IBA
(PMID:26449471)
PMID:21873635
RGD PMID:26449471, PMID:21873635 RGD:13792537 NCBI chr 5:150,684,891...150,703,846
Ensembl chr 5:150,684,133...150,704,117
JBrowse link
G Sesn3 sestrin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:12,823,060...12,878,749
Ensembl chr 8:12,823,155...12,872,705
JBrowse link
cellular response to magnesium starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:17428633 RGD:4106247 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
cellular response to methionine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IEP RGD PMID:1201245 RGD:6893692 NCBI chr17:66,210,444...66,295,014
Ensembl chr17:66,210,461...66,295,014
JBrowse link
cellular response to nitrogen starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07048308.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:71,999,926...72,000,318 JBrowse link
G AABR07072668.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:59,991,111...59,991,590 JBrowse link
G Atg5 autophagy related 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Becn1 beclin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Becn2 beclin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:93,971,720...93,974,467
Ensembl chr13:93,972,426...93,974,410
JBrowse link
G Gabarap GABA type A receptor-associated protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,601,288...56,604,223
Ensembl chr10:56,601,288...56,604,221
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:163,293,724...163,302,866
Ensembl chr 4:163,293,724...163,302,858
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:44,164,935...44,175,771
Ensembl chr19:44,164,935...44,175,770
JBrowse link
G LOC100359937 GABA(A) receptor-associated protein-like 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:95,943,674...95,944,604
Ensembl chr19:44,164,935...44,175,770
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:150,801,289...150,802,935
Ensembl chr 3:150,801,289...150,802,935
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:53,635,449...53,643,970
Ensembl chr19:53,629,779...53,646,058
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,864,144...75,874,567
Ensembl chr16:75,873,881...75,874,519
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:116,297,950...116,301,123
Ensembl chr 8:116,297,950...116,301,122
JBrowse link
cellular response to nutrient term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 IEP N-acetylcysteine RGD PMID:12563020 RGD:1598705 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Ccne1 cyclin E1 IEP RGD PMID:17979132 RGD:2289272 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B ISO
IEA
(PMID:17597576)
GO_REF:0000107
RGD
Ensembl
PMID:17597576 GO_REF:0000107 NCBI chr 5:107,834,353...107,857,428
Ensembl chr 5:107,845,951...107,858,104
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 IEP potassium RGD PMID:16876110 RGD:4891413 NCBI chr 7:116,248,759...116,255,205
Ensembl chr 7:116,156,219...116,255,167
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein IEP RGD PMID:15825833 RGD:2316268 NCBI chr13:36,147,667...36,156,076
Ensembl chr13:36,117,119...36,174,908
JBrowse link
G Hmox1 heme oxygenase 1 IEP RGD PMID:15531134 RGD:1582714 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Lpl lipoprotein lipase ISO (MGI:MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:MGI:6282942 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5428826|PMID:22360721)
Ensembl
UniProt
RGD
PMID:22360721 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5428826 NCBI chr10:82,838,270...82,852,758
Ensembl chr10:82,839,153...82,852,660
JBrowse link
G Prdm4 PR/SET domain 4 IEP fetal calf serum RGD PMID:10485890 RGD:633619 NCBI chr 7:23,959,932...23,986,535
Ensembl chr 7:23,960,378...23,985,525
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 ISO (MGI:MGI:2673743|PMID:12815040) RGD PMID:12815040 MGI:MGI:2673743 NCBI chr 1:264,094,007...264,105,473
Ensembl chr 1:264,094,080...264,105,344
JBrowse link
G Tnks tankyrase IEP RGD PMID:25876076 RGD:13628743 NCBI chr16:60,925,093...61,067,192
Ensembl chr16:60,925,093...61,067,192
JBrowse link
G Xbp1 X-box binding protein 1 ISO (MGI:MGI:4442277|PMID:20348926) RGD PMID:20348926 MGI:MGI:4442277 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 IEP RGD PMID:14526224 RGD:10047409 NCBI chr  X:135,304,063...135,343,062
Ensembl chr  X:135,304,066...135,343,087
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) ISO
IEA
(MGI:MGI:5551666|PMID:24462679)
GO_REF:0000107
RGD
Ensembl
PMID:24462679 GO_REF:0000107, MGI:MGI:5551666 NCBI chr 5:57,423,735...57,429,252
Ensembl chr 5:57,423,734...57,429,245
JBrowse link
G Atf4 activating transcription factor 4 IEP RGD PMID:20444431 RGD:13464322 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IEP RGD PMID:23421680 RGD:13514095 NCBI chr 7:140,311,120...140,324,902
Ensembl chr 7:140,315,368...140,324,902
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:24229686 RGD:11038824 NCBI chr 8:48,481,256...48,564,775
Ensembl chr 8:48,489,036...48,564,722
JBrowse link
G Dnm1l dynamin 1-like IEP RGD PMID:23658809 RGD:12738215 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
G Ireb2 iron responsive element binding protein 2 IDA RGD PMID:16135072 RGD:12904046 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 2:118,929,738...118,971,689
Ensembl chr 2:118,929,738...118,973,698
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mir874 microRNA 874 ISO (MGI:MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:MGI:5551666 NCBI chr17:7,025,014...7,025,089
Ensembl chr17:7,025,014...7,025,089
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:28528966 RGD:13781879 NCBI chr 6:52,122,085...52,156,473
Ensembl chr 6:52,122,085...52,156,472
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:21525936 RGD:10054236 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
G Tsc1 TSC complex subunit 1 IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
cellular response to phosphate starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase ISO (MGI:MGI:5510279|PMID:23863468) RGD PMID:23863468 MGI:MGI:5510279 NCBI chr11:86,715,981...86,735,630
Ensembl chr11:86,715,981...86,735,622
JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:72,918,552...73,056,785
Ensembl chr13:72,918,490...73,056,875
JBrowse link
cellular response to potassium ion starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 IEP RGD PMID:20685870 RGD:4891144 NCBI chr 7:116,248,759...116,255,205
Ensembl chr 7:116,156,219...116,255,167
JBrowse link
G Hrk harakiri, BCL2 interacting protein IMP RGD PMID:17428807 RGD:2290488 NCBI chr12:44,008,879...44,029,211 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IMP RGD PMID:17428807 RGD:2290488 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO (MGI:MGI:3851650|PMID:19458124) RGD PMID:19458124 MGI:MGI:3851650 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Slc38a3 solute carrier family 38, member 3 ISO (MGI:MGI:3851650|PMID:19458124) RGD PMID:19458124 MGI:MGI:3851650 NCBI chr 8:116,406,258...116,423,752
Ensembl chr 8:116,406,241...116,422,366
JBrowse link
cellular response to starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029605.1 ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr10:39,850,818...39,870,188 JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 ISO (PMID:18641923) RGD PMID:18641923 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Alb albumin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16245148)
Ensembl
UniProt
RGD
PMID:16245148 GO_REF:0000024, GO_REF:0000107 NCBI chr14:19,176,275...19,191,793
Ensembl chr14:19,176,277...19,191,863
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 IEP RGD PMID:25117440 RGD:11552604 NCBI chr 3:80,634,470...80,830,068
Ensembl chr 3:80,634,470...80,830,068
JBrowse link
G Atg14 autophagy related 14 ISO
IBA
(PMID:23878393)
PMID:21873635
RGD PMID:23878393, PMID:21873635 RGD:13792537 NCBI chr15:24,343,418...24,374,776
Ensembl chr15:24,343,314...24,374,753
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase ISO (MGI:MGI:5630037|PMID:25578879) RGD PMID:25578879 MGI:MGI:5630037 NCBI chr 9:100,888,457...100,920,123
Ensembl chr 9:100,888,501...100,918,637
JBrowse link
G Atg5 autophagy related 5 ISO
IEA
(MGI:MGI:5494529|PMID:22496425)
GO_REF:0000107
RGD
Ensembl
PMID:22496425 GO_REF:0000107, MGI:MGI:5494529 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 ISO
ISS
(MGI:MGI:5494529|PMID:22496425)
GO_REF:0000024
(PMID:20543840)
RGD
UniProt
PMID:20543840, PMID:22496425 GO_REF:0000024, MGI:MGI:5494529 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Bmf Bcl2 modifying factor ISO (MGI:MGI:5490676|PMID:23629966) RGD PMID:23629966 MGI:MGI:5490676 NCBI chr 3:110,303,515...110,324,125
Ensembl chr 3:110,306,067...110,324,084
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:15657086) RGD PMID:15657086 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Cadps2 calcium dependent secretion activator 2 ISO (MGI:MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:MGI:5468191 NCBI chr 4:50,326,447...50,861,161
Ensembl chr 4:50,326,442...50,860,756
JBrowse link
G Cartpt CART prepropeptide ISO
IBA
IDA
(MGI:MGI:1203479|PMID:9590691)
PMID:21873635
PMID:15680948
RGD PMID:9590691, PMID:21873635, PMID:9590691, PMID:15680948 MGI:MGI:1203479, RGD:13792537, RGD:8554847, RGD:8553315 NCBI chr 2:30,125,249...30,127,408
Ensembl chr 2:30,125,249...30,127,269
JBrowse link
G Cav1 caveolin 1 ISO (PMID:15657086) RGD PMID:15657086 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Clec16a C-type lectin domain containing 16A ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Ctsl cathepsin L IEP serum and potassium deprivation RGD PMID:16176344 RGD:2315590 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 ISO MGI:MGI:4329547 (MGI:MGI:5529421|PMID:23530063) RGD PMID:23530063 MGI:MGI:5529421 NCBI chr15:59,990,131...60,056,710
Ensembl chr15:59,990,131...60,056,710
JBrowse link
G Dsc2 desmocollin 2 ISO (MGI:MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:MGI:5468191 NCBI chr18:11,826,705...11,858,801
Ensembl chr18:11,826,706...11,858,754
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO (PMID:23918802) RGD PMID:23918802 NCBI chr20:4,576,033...4,592,980
Ensembl chr20:4,576,057...4,592,980
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:3589702|PMID:15937339) RGD PMID:15937339 MGI:MGI:3589702 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 ISO
IEA
(PMID:21072319)
GO_REF:0000107
RGD
Ensembl
PMID:21072319 GO_REF:0000107 NCBI chr 2:211,243,398...211,323,283
Ensembl chr 2:211,246,068...211,322,719
JBrowse link
G Fads1 fatty acid desaturase 1 ISO (PMID:10601301) RGD PMID:10601301 NCBI chr 1:226,234,034...226,249,118
Ensembl chr 1:226,234,074...226,249,138
JBrowse link
G Fbxo22 F-box protein 22 ISO (MGI:MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:MGI:3840749 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Flcn folliculin ISS
ISO
GO_REF:0000024
(PMID:24095279), (PMID:31672913)
UniProt
RGD
PMID:24095279, PMID:31672913 GO_REF:0000024 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Fnip1 folliculin interacting protein 1 ISO MGI:MGI:5437714 (MGI:MGI:5436190|PMID:22608497) RGD PMID:22608497 MGI:MGI:5436190 NCBI chr10:39,786,687...39,870,188 JBrowse link
G Foxa3 forkhead box A3 ISO
IEA
MGI:MGI:2178218 (MGI:MGI:2153289|PMID:11546810)
GO_REF:0000107
RGD
Ensembl
PMID:11546810 GO_REF:0000107, MGI:MGI:2153289 NCBI chr 1:79,921,292...79,930,219
Ensembl chr 1:79,920,752...79,930,263
JBrowse link
G Foxo1 forkhead box O1 ISO
ISS
(PMID:20543840)
GO_REF:0000024
RGD
UniProt
PMID:20543840 GO_REF:0000024 NCBI chr 2:141,451,234...141,527,016
Ensembl chr 2:141,451,234...141,527,016
JBrowse link
G Gas2l1 growth arrest-specific 2 like 1 ISO (MGI:MGI:3052497|PMID:12584248) RGD PMID:12584248 MGI:MGI:3052497 NCBI chr14:85,308,443...85,318,475
Ensembl chr14:85,308,443...85,318,194
JBrowse link
G Gas6 growth arrest specific 6 ISO (MGI:MGI:1861137|PMID:8336730) RGD PMID:8336730 MGI:MGI:1861137 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Gba glucosylceramidase beta ISO (MGI:MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:MGI:5501380 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Gcgr glucagon receptor ISO (MGI:MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:MGI:5474727 NCBI chr10:109,707,863...109,716,253
Ensembl chr10:109,707,962...109,716,128
JBrowse link
G Glul glutamate-ammonia ligase ISO (MGI:MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:MGI:5468191 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229
JBrowse link
G Inhbb inhibin subunit beta B IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19491194)
Ensembl
UniProt
RGD
PMID:19491194 GO_REF:0000024, GO_REF:0000107 NCBI chr13:35,436,532...35,442,222
Ensembl chr13:35,436,532...35,442,222
JBrowse link
G Klf10 Kruppel-like factor 10 ISO
ISS
(MGI:MGI:4438787|PMID:20070857)
GO_REF:0000024
RGD
UniProt
PMID:20070857 GO_REF:0000024, MGI:MGI:4438787 NCBI chr 7:77,156,010...77,162,096
Ensembl chr 7:77,156,006...77,162,148
JBrowse link
G Krt20 keratin 20 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:MGI:3759335|PMID:16608857)
UniProt
Ensembl
RGD
PMID:16608857 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3759335 NCBI chr10:87,342,514...87,351,045
Ensembl chr10:87,342,619...87,351,045
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 ISO
IBA
ISS
(MGI:MGI:5805578|PMID:27628032)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:27628032, PMID:21873635 GO_REF:0000024, MGI:MGI:5805578, RGD:13792537 NCBI chr  X:124,722,628...124,766,079
Ensembl chr  X:124,722,628...124,766,044
JBrowse link
G LOC108348096 ras-related GTP-binding protein B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:19,336,382...19,369,872
Ensembl chr  X:19,336,372...19,369,746
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (PMID:24211199) RGD PMID:24211199 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha ISO (PMID:28223137) RGD PMID:28223137 NCBI chr 3:150,801,289...150,802,935
Ensembl chr 3:150,801,289...150,802,935
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta ISO (PMID:28223137) RGD PMID:28223137 NCBI chr19:53,635,449...53,643,970
Ensembl chr19:53,629,779...53,646,058
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 ISO (PMID:10791971) RGD PMID:10791971 NCBI chr 7:70,585,011...70,602,425
Ensembl chr 7:70,585,013...70,602,310
JBrowse link
G Max MYC associated factor X IEP serum deprivation RGD PMID:10446908 RGD:2316822 NCBI chr 6:99,984,260...100,011,460
Ensembl chr 6:99,984,260...100,011,388
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:MGI:5474727 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISS
ISO
GO_REF:0000024
(PMID:22343943), (PMID:22576015), (PMID:22692423), (PMID:28223137)
UniProt
RGD
PMID:22343943, PMID:22576015, PMID:22692423, PMID:28223137 GO_REF:0000024 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Myh13 myosin heavy chain 13 ISO (MGI:MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:MGI:3840749 NCBI chr10:53,921,077...53,927,553 JBrowse link
G Myod1 myogenic differentiation 1 ISO
IEA
(MGI:MGI:3840749|PMID:19319192)
GO_REF:0000107
RGD
Ensembl
PMID:19319192 GO_REF:0000107, MGI:MGI:3840749 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Nupr2 nuclear protein 2, transcriptional regulator ISO (PMID:25899918) RGD PMID:25899918 NCBI chr12:30,300,936...30,304,041
Ensembl chr12:30,303,725...30,304,036
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 IDA
ISO
PMID:16407292
(MGI:MGI:3700436|PMID:16407292)
RGD PMID:16407292, PMID:16407292 MGI:MGI:3700436, RGD:8553473 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:14966024)
Ensembl
UniProt
RGD
PMID:14966024 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:30,546,772...30,556,774
Ensembl chr 4:30,546,664...30,556,814
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha ISO MGI:MGI:2685045 (MGI:MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:MGI:5565574 NCBI chr 1:185,210,922...185,326,314
Ensembl chr 1:185,210,922...185,326,314
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta ISO MGI:MGI:1203729 (MGI:MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:MGI:5565574 NCBI chr13:49,848,939...49,909,404
Ensembl chr13:49,850,189...49,911,202
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 ISO (MGI:MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:MGI:5565574 NCBI chr18:22,964,121...23,047,896
Ensembl chr18:22,964,210...23,047,895
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (MGI:MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:MGI:5474727 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D IEP RGD PMID:23520533 RGD:8693590 NCBI chr10:72,909,550...72,945,884
Ensembl chr10:72,909,550...72,945,884
JBrowse link
G Ralb RAS like proto-oncogene B IEA
ISO
GO_REF:0000107
(PMID:24056301)
Ensembl
RGD
PMID:24056301 GO_REF:0000107 NCBI chr13:35,494,716...35,531,503
Ensembl chr13:35,494,721...35,511,020
JBrowse link
G Ripor1 RHO family interacting cell polarization regulator 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:27807006)
Ensembl
UniProt
RGD
PMID:27807006 GO_REF:0000024, GO_REF:0000107 NCBI chr19:37,555,940...37,584,842
Ensembl chr19:37,568,113...37,587,294
JBrowse link
G Rnase4 ribonuclease A family member 4 ISO (MGI:MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:MGI:5468191 NCBI chr15:28,018,040...28,035,395
Ensembl chr15:28,018,040...28,035,389
Ensembl chr15:28,018,040...28,035,389
JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:108,750,620...109,058,691
Ensembl chr10:108,750,620...109,058,691
JBrowse link
G Rraga Ras-related GTP binding A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:104,941,067...104,942,662
Ensembl chr 5:104,941,066...104,942,662
JBrowse link
G RragB Ras-related GTP binding B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:19,085,913...19,135,049
Ensembl chr  X:19,336,372...19,369,746
Ensembl chr  X:19,336,372...19,369,746
JBrowse link
G Rragc Ras-related GTP binding C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:141,572,536...141,590,784
Ensembl chr 5:141,572,536...141,590,781
JBrowse link
G Rragd Ras-related GTP binding D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:48,224,994...48,260,691
Ensembl chr 5:48,224,994...48,260,685
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEA
ISO
GO_REF:0000107
(PMID:11932307), (PMID:9724099)
Ensembl
RGD
PMID:9724099, PMID:11932307 GO_REF:0000107 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:MGI:3045940|PMID:15175761) RGD PMID:15175761 MGI:MGI:3045940 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Sphk1 sphingosine kinase 1 IEP RGD PMID:16959847 RGD:2311370 NCBI chr10:105,498,728...105,504,401
Ensembl chr10:105,498,728...105,504,393
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP serum-free culture RGD PMID:9729333 RGD:1600064 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IDA
ISO
PMID:16407292
(MGI:MGI:3700436|PMID:16407292)
RGD PMID:16407292, PMID:16407292 MGI:MGI:3700436, RGD:8553473 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO
IEA
(PMID:25339898)
GO_REF:0000107
RGD
Ensembl
PMID:25339898 GO_REF:0000107 NCBI chr 7:123,381,082...123,438,605
Ensembl chr 7:123,381,077...123,438,603
JBrowse link
G Stk24 serine/threonine kinase 24 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:27807006)
Ensembl
UniProt
RGD
PMID:27807006 GO_REF:0000024, GO_REF:0000107 NCBI chr15:106,629,258...106,678,917
Ensembl chr15:106,629,312...106,678,918
JBrowse link
G Stk26 serine/threonine kinase 26 ISO (PMID:27807006) RGD PMID:27807006 NCBI chr  X:138,032,356...138,096,632
Ensembl chr  X:138,046,494...138,096,669
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO MGI:MGI:5430317 (MGI:MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:MGI:5468191 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Tfeb transcription factor EB ISO (PMID:21617040), (PMID:22343943), (PMID:22576015), (PMID:22692423) RGD PMID:21617040, PMID:22343943, PMID:22576015, PMID:22692423 NCBI chr 9:15,208,141...15,264,101
Ensembl chr 9:15,207,822...15,214,596
JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A ISO (MGI:MGI:3510094|PMID:15494374) RGD PMID:15494374 MGI:MGI:3510094 NCBI chr 1:192,991,584...193,146,403
Ensembl chr 1:193,076,430...193,146,394
JBrowse link
G Usp33 ubiquitin specific peptidase 33 ISO (PMID:24056301) RGD PMID:24056301 NCBI chr 2:257,567,179...257,602,817
Ensembl chr 2:257,568,613...257,602,810
JBrowse link
G Vps41 VPS41 subunit of HOPS complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:48,643,754...48,810,633
Ensembl chr17:48,648,879...48,810,991
JBrowse link
G Wdr45 WD repeat domain 45 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28561066)
UniProt
Ensembl
RGD
PMID:28561066 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:15,621,249...15,627,159
Ensembl chr  X:15,621,209...15,627,235
JBrowse link
G Wdr45b WD repeat domain 45B ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:110,523,843...110,555,769
Ensembl chr10:110,525,749...110,555,761
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:97,859,730...97,896,949
Ensembl chr10:97,859,727...97,896,525
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 ISS
ISO
GO_REF:0000024
(PMID:28561066)
UniProt
RGD
PMID:28561066 GO_REF:0000024 NCBI chr12:13,969,704...13,998,134
Ensembl chr12:13,969,586...13,998,172
JBrowse link
G Wnt2b Wnt family member 2B ISO (MGI:MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:MGI:5468191 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(MGI:MGI:5468191|PMID:23260145)
GO_REF:0000107
RGD
Ensembl
PMID:23260145 GO_REF:0000107, MGI:MGI:5468191 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt9b Wnt family member 9B ISO (MGI:MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:MGI:5468191 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:11420665) RGD PMID:11420665 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 ISO (PMID:25578879) RGD PMID:25578879 NCBI chr 6:107,031,411...107,080,590
Ensembl chr 6:107,031,412...107,080,524
JBrowse link
cellular response to vitamin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting protein C-terminal helicase 1 IEP RGD PMID:16771696 RGD:2326085 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ltc4s leukotriene C4 synthase IEP RGD PMID:12767051 RGD:724432 NCBI chr10:35,736,486...35,743,088
Ensembl chr10:35,737,664...35,739,625
JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:15656374 RGD:2317394 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt1 sirtuin 1 IEP RGD PMID:23555824 RGD:10047117 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IEP RGD PMID:11108265 RGD:9681746 NCBI chr11:25,342,119...25,350,938
Ensembl chr11:25,342,126...25,350,974
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 IEP RGD PMID:11277270 RGD:2317730 NCBI chr 7:41,114,606...41,223,138
Ensembl chr 7:41,114,697...41,220,579
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:6607920, PMID:3257212 RGD:2316174, RGD:6483560 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Casr calcium-sensing receptor IEP 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Fes FES proto-oncogene, tyrosine kinase ISO (PMID:28389358) RGD PMID:28389358 NCBI chr 1:142,174,648...142,183,884
Ensembl chr 1:142,174,648...142,183,884
JBrowse link
G Fgf23 fibroblast growth factor 23 IEP RGD PMID:23263654 RGD:10044209 NCBI chr 4:159,622,404...159,630,082
Ensembl chr 4:159,622,404...159,630,082
JBrowse link
G Fzd1 frizzled class receptor 1 IEP RGD PMID:1334084 RGD:61590 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Fzd2 frizzled class receptor 2 IEP RGD PMID:1334084 RGD:61590 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Gdap1 ganglioside-induced differentiation-associated-protein 1 IEP RGD PMID:25449168 RGD:12738378 NCBI chr 5:1,328,963...1,347,946
Ensembl chr 5:1,328,913...1,347,921
JBrowse link
G Il15 interleukin 15 IEP RGD PMID:15637289 RGD:2311387 NCBI chr19:23,542,606...23,624,366
Ensembl chr19:23,542,889...23,554,594
JBrowse link
G Itgb1 integrin subunit beta 1 IEP calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 IEP RGD PMID:10025676 RGD:10412059 NCBI chr 6:21,203,502...21,600,441
Ensembl chr 6:21,203,502...21,600,451
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:22064970 RGD:7207281 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Nos2 nitric oxide synthase 2 IEP RGD PMID:18534083 RGD:4891908 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 IDA RGD PMID:15862831 RGD:9999173 NCBI chr 3:113,376,983...113,400,707
Ensembl chr 3:113,376,983...113,400,707
JBrowse link
G Penk proenkephalin IEP RGD PMID:8584038 RGD:10003035 NCBI chr 5:17,056,412...17,061,762
Ensembl chr 5:17,056,419...17,061,837
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked IEP RGD PMID:15337762 RGD:11556251 NCBI chr  X:40,460,047...40,717,982
Ensembl chr  X:40,460,047...40,717,982
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:21153232 RGD:9831436 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEA
ISO
GO_REF:0000107
(PMID:16149051)
Ensembl
RGD
PMID:16149051 GO_REF:0000107 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 IDA RGD PMID:14978251 RGD:2317006 NCBI chr 1:76,558,721...76,614,315
Ensembl chr 1:76,252,329...76,780,230
JBrowse link
G Tnc tenascin C IEP RGD PMID:10502285 RGD:4889620 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
G Vdr vitamin D receptor IEP RGD PMID:9753201 RGD:8158092 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain IEP RGD PMID:23722449 RGD:8552711 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEP RGD PMID:23722449 RGD:8552711 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Pawr pro-apoptotic WT1 regulator IEP RGD PMID:10428045 RGD:9835341 NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP RGD PMID:11752099 RGD:8553036 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 IEP menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Gas6 growth arrest specific 6 ISO
ISS
(PMID:16359517)
GO_REF:0000024
RGD
UniProt
PMID:16359517 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Postn periostin ISO (PMID:18450759)
(MGI:MGI:3804342|PMID:18450759)
RGD PMID:18450759 MGI:MGI:3804342 NCBI chr 2:143,656,820...143,688,087
Ensembl chr 2:143,656,793...143,688,087
JBrowse link
cellular response to zinc ion starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc39a4 solute carrier family 39 member 4 ISO
IEA
(MGI:MGI:3522410|PMID:15358787)
GO_REF:0000107
RGD
Ensembl
PMID:15358787 GO_REF:0000107, MGI:MGI:3522410 NCBI chr 7:117,675,718...117,682,586
Ensembl chr 7:117,675,720...117,680,004
JBrowse link
G Slc39a5 solute carrier family 39 member 5 ISO (MGI:MGI:3522410|PMID:15358787) RGD PMID:15358787 MGI:MGI:3522410 NCBI chr 7:2,813,875...2,819,917
Ensembl chr 7:2,813,875...2,819,299
JBrowse link
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 ISO (MGI:MGI:5142372|PMID:11875061) RGD PMID:11875061 MGI:MGI:5142372 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kank2 KN motif and ankyrin repeat domains 2 ISO
IBA
(PMID:24671081)
PMID:21873635
RGD PMID:24671081, PMID:21873635 RGD:13792537 NCBI chr 8:22,792,000...22,821,459
Ensembl chr 8:22,791,995...22,821,397
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (PMID:19502595) RGD PMID:19502595 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor IMP RGD PMID:20655308 RGD:5131625 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 ISO (PMID:10207113)
(MGI:MGI:5297786|PMID:16723356)
RGD PMID:10207113, PMID:16723356 MGI:MGI:5297786 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 ISO (MGI:MGI:5142372|PMID:11875061) RGD PMID:11875061 MGI:MGI:5142372 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Usf1 upstream transcription factor 1 ISO (PMID:7852331)
(MGI:MGI:1330677|PMID:9890958)
RGD PMID:7852331, PMID:9890958 MGI:MGI:1330677 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting ISO
IEA
(PMID:7852331)
GO_REF:0000107
(MGI:MGI:1330677|PMID:9890958)
RGD
Ensembl
PMID:7852331, PMID:9890958 GO_REF:0000107, MGI:MGI:1330677 NCBI chr 1:89,371,798...89,383,005
Ensembl chr 1:89,371,794...89,382,463
JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:2149467|PMID:10655230), (MGI:MGI:3589053|PMID:16121183)
UniProt
RGD
PMID:10655230, PMID:16121183 GO_REF:0000024, MGI:MGI:2149467, MGI:MGI:3589053 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Impact impact RWD domain protein ISO
IBA
ISS
(MGI:MGI:5494763|PMID:23447528)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23447528, PMID:21873635 GO_REF:0000024, MGI:MGI:5494763, RGD:13792537 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 ISO (PMID:16549446) RGD PMID:16549446 NCBI chr 7:70,333,150...70,340,006
Ensembl chr 7:70,335,061...70,340,005
JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator ISO (PMID:15890672) RGD PMID:15890672 NCBI chr12:51,214,192...51,250,230
Ensembl chr12:51,214,192...51,250,230
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:11514567), (PMID:9632709) RGD PMID:9632709, PMID:11514567 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
regulation of eIF2 alpha phosphorylation by amino acid starvation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO
ISS
(PMID:26102367)
(MGI:MGI:2149467|PMID:10655230), (MGI:MGI:3582244|PMID:11106749), (MGI:MGI:3589053|PMID:16121183), (MGI:MGI:3770235|PMID:16054071), (MGI:MGI:5700278|PMID:26102367)
GO_REF:0000024
RGD
UniProt
PMID:10655230, PMID:11106749, PMID:16054071, PMID:16121183, PMID:26102367 GO_REF:0000024, MGI:MGI:2149467, MGI:MGI:3582244, MGI:MGI:3589053, MGI:MGI:3770235, MGI:MGI:5700278 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Impact impact RWD domain protein ISO
IBA
ISS
(MGI:MGI:5494763|PMID:23447528)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23447528, PMID:21873635 GO_REF:0000024, MGI:MGI:5494763, RGD:13792537 NCBI chr18:4,325,872...4,346,734
Ensembl chr18:4,325,875...4,346,769
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 ISO MGI:MGI:1861125 (MGI:MGI:3655015|PMID:16324150) RGD PMID:16324150 MGI:MGI:3655015 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:14985122) RGD PMID:14985122 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Trim24 tripartite motif-containing 24 ISO MGI:MGI:3772051 (MGI:MGI:3776949|PMID:18287084) RGD PMID:18287084 MGI:MGI:3776949 NCBI chr 4:65,632,278...65,684,746
Ensembl chr 4:65,637,407...65,684,743
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase ISO (PMID:22720752) RGD PMID:22720752 NCBI chr20:8,165,423...8,169,557
Ensembl chr20:8,165,307...8,169,555
JBrowse link
G Vdr vitamin D receptor IEA
ISO
GO_REF:0000107
(PMID:16549446), (PMID:28698609)
Ensembl
RGD
PMID:16549446, PMID:28698609 GO_REF:0000107 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    response to stimulus 10583
      cellular response to stimulus 8920
        cellular response to extracellular stimulus 296
          cellular response to nutrient levels 260
            cellular response to boron-containing substance levels + 0
            cellular response to nitrogen levels + 14
            cellular response to nutrient + 63
            cellular response to oxygen-glucose deprivation 13
            cellular response to starvation + 181
            negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels 0
Path 2
Term Annotations click to browse term
  biological_process 20027
    response to stimulus 10583
      response to external stimulus 3202
        response to extracellular stimulus 763
          response to nutrient levels 732
            cellular response to nutrient levels 260
              cellular response to boron-containing substance levels + 0
              cellular response to nitrogen levels + 14
              cellular response to nutrient + 63
              cellular response to oxygen-glucose deprivation 13
              cellular response to starvation + 181
              negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.