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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to nutrient
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Accession:GO:0031670 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.


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cellular response to nutrient term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat2 acetyl-CoA acetyltransferase 2 JBrowse link 1 47,972,399 47,992,654 RGD:1598705
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:2289272
G Cdkn2b cyclin-dependent kinase inhibitor 2B JBrowse link 5 107,834,353 107,857,428 RGD:1624291
RGD:1600115
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 JBrowse link 7 116,248,759 116,255,205 RGD:4891413
G Dbi diazepam binding inhibitor, acyl-CoA binding protein JBrowse link 13 36,147,667 36,156,076 RGD:2316268
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:1582714
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1600115
RGD:1624291
G Pdk2 pyruvate dehydrogenase kinase 2 JBrowse link 10 82,838,270 82,852,758 RGD:1600115
RGD:1624291
G Prdm4 PR/SET domain 4 JBrowse link 7 23,959,932 23,986,535 RGD:633619
G Scd4 stearoyl-coenzyme A desaturase 4 JBrowse link 1 264,094,007 264,105,473 RGD:1624291
G Tnks tankyrase JBrowse link 16 60,925,093 61,067,192 RGD:13628743
G Xbp1 X-box binding protein 1 JBrowse link 14 85,753,736 85,758,820 RGD:1624291
cellular response to ATP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8549571
G Cib2 calcium and integrin binding family member 2 JBrowse link 8 59,123,078 59,139,946 RGD:1600115
RGD:1624291
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link 7 27,226,570 27,240,533 RGD:1624291
RGD:1600115
G LOC102552569 P2Y purinoceptor 11-like JBrowse link 8 21,910,636 21,911,499 RGD:1624291
G P2rx3 purinergic receptor P2X 3 JBrowse link 3 72,403,992 72,447,801 RGD:729168
RGD:1624291
G P2rx4 purinergic receptor P2X 4 JBrowse link 12 39,308,022 39,325,673 RGD:1624291
RGD:61682
RGD:1600115
G P2ry12 purinergic receptor P2Y12 JBrowse link 2 149,440,807 149,482,592 RGD:1624291
RGD:6480646
RGD:1600115
G Pdxp pyridoxal phosphatase JBrowse link 7 120,140,460 120,145,908 RGD:1624291
RGD:1600115
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5135027
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:12903237
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:8547950
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655973
G Ssh1 slingshot protein phosphatase 1 JBrowse link 12 48,403,184 48,447,964 RGD:1624291
RGD:1600115
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
G Top2b DNA topoisomerase II beta JBrowse link 15 10,262,972 10,319,741 RGD:13432146
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 JBrowse link 1 101,293,300 101,323,484 RGD:1600115
RGD:1624291
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 JBrowse link 10 59,799,123 59,824,208 RGD:8553505
cellular response to folic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Folr1 folate receptor alpha JBrowse link 1 166,934,457 166,945,864 RGD:1624291
RGD:1600115
G Folr2 folate receptor beta JBrowse link 1 166,915,045 166,933,377 RGD:1600115
cellular response to glycine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l2 Bcl2-like 2 JBrowse link 15 33,543,774 33,549,165 RGD:14394513
G Fyn FYN proto-oncogene, Src family tyrosine kinase JBrowse link 20 44,436,354 44,630,316 RGD:13506268
G Myo5b myosin Vb JBrowse link 18 70,426,865 70,729,985 RGD:11533643
cellular response to L-arginine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Castor1 cytosolic arginine sensor for mTORC1 subunit 1 JBrowse link 14 84,447,552 84,457,396 RGD:1624291
RGD:13792537
RGD:1600115
G Castor2 cytosolic arginine sensor for mTORC1 subunit 2 JBrowse link 12 25,595,800 25,638,806 RGD:13792537
G Reg3b regenerating family member 3 beta JBrowse link 4 109,467,272 109,470,510 RGD:9831424
cellular response to L-ascorbic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:9585689
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:5128594
cellular response to L-glutamate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:11041133
G Amigo1 adhesion molecule with Ig like domain 1 JBrowse link 2 210,977,125 210,982,582 RGD:14390155
G Atp5mc1 ATP synthase membrane subunit c locus 1 JBrowse link 10 83,895,941 83,898,640 RGD:13800748
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684984
G Bcl11a BAF chromatin remodeling complex subunit BCL11A JBrowse link 14 108,826,717 108,921,197 RGD:11100020
G Fyn FYN proto-oncogene, Src family tyrosine kinase JBrowse link 20 44,436,354 44,630,316 RGD:13506268
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:13204765
G Opa1 OPA1, mitochondrial dynamin like GTPase JBrowse link 11 74,717,600 74,793,902 RGD:13432138
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:13432138
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:13204761
cellular response to L-glutamine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:2291907
G Cybb cytochrome b-245 beta chain JBrowse link X 14,578,330 14,610,049 RGD:2291907
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:10450472
RGD:10450473
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:13432138
cellular response to methionine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:6893692
cellular response to vitamin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:2326085
cellular response to vitamin A term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ltc4s leukotriene C4 synthase JBrowse link 10 35,736,486 35,743,088 RGD:724432
cellular response to vitamin B1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:2317394
cellular response to vitamin B3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:10047117
cellular response to vitamin D term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 JBrowse link 11 25,342,119 25,350,938 RGD:9681746
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 JBrowse link 7 41,114,606 41,223,138 RGD:2317730
G Bglap bone gamma-carboxyglutamate protein JBrowse link 2 187,741,770 187,748,445 RGD:2316174
RGD:6483560
G Casr calcium-sensing receptor JBrowse link 11 67,188,204 67,262,261 RGD:7205697
G Fes FES proto-oncogene, tyrosine kinase JBrowse link 1 142,174,648 142,183,884 RGD:1600115
RGD:1624291
G Fgf23 fibroblast growth factor 23 JBrowse link 4 159,622,404 159,630,082 RGD:10044209
G Fzd1 frizzled class receptor 1 JBrowse link 4 26,470,864 26,475,262 RGD:61590
G Fzd2 frizzled class receptor 2 JBrowse link 10 90,550,147 90,552,057 RGD:61590
G Gdap1 ganglioside-induced differentiation-associated-protein 1 JBrowse link 5 1,328,963 1,347,946 RGD:12738378
G Il15 interleukin 15 JBrowse link 19 23,542,606 23,624,366 RGD:2311387
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:2325261
G Ltbp1 latent transforming growth factor beta binding protein 1 JBrowse link 6 21,203,502 21,600,441 RGD:10412059
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:7207281
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891908
G Pdia3 protein disulfide isomerase family A, member 3 JBrowse link 3 113,376,983 113,400,707 RGD:9999173
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:10003035
G Phex phosphate regulating endopeptidase homolog, X-linked JBrowse link X 40,460,047 40,717,982 RGD:11556251
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:9831436
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 16 73,372,007 73,410,777 RGD:1600115
RGD:1624291
G Sult2a1 sulfotransferase family 2A member 1 JBrowse link 1 76,558,721 76,614,315 RGD:2317006
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:4889620
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:8158092
cellular response to vitamin E term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:8552711
G Col2a1 collagen type II alpha 1 chain JBrowse link 7 139,454,945 139,484,403 RGD:8552711
G Pawr pro-apoptotic WT1 regulator JBrowse link 7 51,273,764 51,353,700 RGD:9835341
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:8553036
cellular response to vitamin K term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4889997
G Gas6 growth arrest specific 6 JBrowse link 16 81,213,364 81,243,824 RGD:1624291
RGD:1600115
G Postn periostin JBrowse link 2 143,656,820 143,688,087 RGD:1624291
RGD:1600115
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxa2 forkhead box A2 JBrowse link 3 142,383,084 142,387,493 RGD:1624291
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kank2 KN motif and ankyrin repeat domains 2 JBrowse link 8 22,792,000 22,821,459 RGD:1624291
RGD:13792537
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
positive regulation of transcription by glucose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:5131625
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ncoa1 nuclear receptor coactivator 1 JBrowse link 6 28,677,563 28,931,844 RGD:1624291
RGD:1600115
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxa2 forkhead box A2 JBrowse link 3 142,383,084 142,387,493 RGD:1624291
G Usf1 upstream transcription factor 1 JBrowse link 13 89,797,750 89,805,561 RGD:1624291
RGD:1600115
G Usf2 upstream transcription factor 2, c-fos interacting JBrowse link 1 89,371,798 89,383,005 RGD:1624291
RGD:1600115
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:1624291
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Med1 mediator complex subunit 1 JBrowse link 10 86,101,560 86,145,271 RGD:1624291
RGD:1600115
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Trim24 tripartite motif-containing 24 JBrowse link 4 65,632,278 65,684,746 RGD:1624291
vitamin D receptor signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase JBrowse link 20 8,165,423 8,169,557 RGD:1624291
RGD:1600115
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19245
    response to stimulus 10340
      cellular response to stimulus 8664
        cellular response to chemical stimulus 3418
          cellular response to nutrient 97
            carbon catabolite regulation of transcription + 5
            catabolite repression + 0
            cellular response to ATP + 17
            cellular response to L-arginine 3
            cellular response to L-glutamate 10
            cellular response to L-glutamine 4
            cellular response to glycine 3
            cellular response to methionine 1
            cellular response to singlet oxygen + 0
            cellular response to vitamin + 44
            nitrogen catabolite regulation of transcription + 0
Path 2
Term Annotations click to browse term
  biological_process 19245
    response to stimulus 10340
      response to external stimulus 3068
        response to extracellular stimulus 784
          cellular response to extracellular stimulus 313
            cellular response to nutrient levels 277
              cellular response to nutrient 97
                carbon catabolite regulation of transcription + 5
                catabolite repression + 0
                cellular response to ATP + 17
                cellular response to L-arginine 3
                cellular response to L-glutamate 10
                cellular response to L-glutamine 4
                cellular response to glycine 3
                cellular response to methionine 1
                cellular response to singlet oxygen + 0
                cellular response to vitamin + 44
                nitrogen catabolite regulation of transcription + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.