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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle lumen
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Accession:GO:0031983 term browser browse the term
Definition:The volume enclosed by the membrane or protein that forms a vesicle.
Synonyms:xref: NIF_Subcellular:sao797538226


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vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:1626402
acrosomal lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spata31a5 SPATA31 subfamily A member 5 JBrowse link 17 2,417,700 2,423,486 RGD:1600115
G Zp3r zona pellucida 3 receptor JBrowse link 13 47,286,375 47,331,213 RGD:1600115
azurophil granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prss57 serine protease 57 JBrowse link 7 12,798,310 12,804,668 RGD:1624291
RGD:1600115
G Prtn3 proteinase 3 JBrowse link 7 12,643,712 12,646,951 RGD:1624291
chromaffin granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1600115
cytoplasmic vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:1600115
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:1600115
G Lcn2 lipocalin 2 JBrowse link 3 11,414,189 11,417,534 RGD:1600115
G Serpini1 serpin family I member 1 JBrowse link 2 174,013,058 174,111,693 RGD:1624291
RGD:1600115
G Zg16 zymogen granule protein 16 JBrowse link 1 198,483,800 198,486,157 RGD:1600115
multivesicular body, internal vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:1624291
neuronal dense core vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdyn prodynorphin JBrowse link 3 122,194,327 122,206,671 RGD:13702229
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:13702175
secretory granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1600115
RGD:1624291
G Grp gastrin releasing peptide JBrowse link 18 61,563,458 61,576,818 RGD:1600115
G Pcsk1 proprotein convertase subtilisin/kexin type 1 JBrowse link 2 91,450,162 91,497,091 RGD:1600115
G Pcsk2 proprotein convertase subtilisin/kexin type 2 JBrowse link 3 137,618,891 137,923,385 RGD:1600115
G Serpini1 serpin family I member 1 JBrowse link 2 174,013,058 174,111,693 RGD:1624291
synaptic vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:13702175

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19843
    cellular anatomical entity 19457
      membrane-enclosed lumen 4424
        organelle lumen 4424
          vesicle lumen 17
            cytoplasmic vesicle lumen + 15
            multivesicular body, internal vesicle lumen 1
Path 2
Term Annotations click to browse term
  cellular_component 19843
    cellular anatomical entity 19457
      organelle 12557
        membrane-bounded organelle 10879
          vesicle 1980
            vesicle lumen 17
              cytoplasmic vesicle lumen + 15
              multivesicular body, internal vesicle lumen 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.