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ONTOLOGY REPORT - ANNOTATIONS


Term:mitochondrial DNA metabolic process
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Accession:GO:0032042 term browser browse the term
Definition:The chemical reactions and pathways involving mitochondrial DNA.
Synonyms:exact_synonym: mitochondrial DNA metabolism;   mtDNA metabolic process;   mtDNA metabolism


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mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfh complement factor H JBrowse link 13 56,979,155 57,080,540 RGD:1624291
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:1624291
G Polg2 DNA polymerase gamma 2, accessory subunit JBrowse link 10 94,968,836 94,979,259 RGD:1624291
G Sesn2 sestrin 2 JBrowse link 5 150,684,891 150,703,846 RGD:1624291
G Tk2 thymidine kinase 2 JBrowse link 19 917,203 939,236 RGD:1624291
G Top3a DNA topoisomerase III alpha JBrowse link 10 46,980,646 47,018,728 RGD:1624291
mitochondrial DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 4 123,108,924 123,118,186 RGD:1624291
G Dna2 DNA replication helicase/nuclease 2 RGD:1600115
G Lig3 DNA ligase 3 JBrowse link 10 70,134,734 70,158,051 RGD:1624291
RGD:13792537
G Mgme1 mitochondrial genome maintenance exonuclease 1 JBrowse link 3 138,397,925 138,406,672 RGD:1600115
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:1624291
G Primpol primase and DNA directed polymerase JBrowse link 16 48,863,385 48,900,409 RGD:1624291
G Slc25a16 solute carrier family 25 member 16 JBrowse link 20 27,283,383 27,308,069 RGD:1600115
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
negative regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:1624291
positive regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:1624291
regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mpv17 mitochondrial inner membrane protein MPV17 JBrowse link 6 26,585,713 26,600,265 RGD:1624291
RGD:1600115
G Stox1 storkhead box 1 JBrowse link 20 32,276,857 32,353,677 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19578
    cellular process 18362
      cellular metabolic process 10737
        cellular macromolecule metabolic process 8223
          DNA metabolic process 887
            mitochondrial DNA metabolic process 17
              DNA synthesis involved in mitochondrial DNA replication 0
              mitochondrial DNA catabolic process 0
              mitochondrial DNA repair 8
              mitochondrion DNA recombination 0
              negative regulation of mitochondrial DNA metabolic process 1
              positive regulation of mitochondrial DNA metabolic process 1
              regulation of mitochondrial DNA metabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 19578
    cellular process 18362
      cellular component organization or biogenesis 6481
        cellular component organization 6258
          organelle organization 3898
            mitochondrion organization 505
              mitochondrial genome maintenance 25
                mitochondrial DNA metabolic process 17
                  DNA synthesis involved in mitochondrial DNA replication 0
                  mitochondrial DNA catabolic process 0
                  mitochondrial DNA repair 8
                  mitochondrion DNA recombination 0
                  negative regulation of mitochondrial DNA metabolic process 1
                  positive regulation of mitochondrial DNA metabolic process 1
                  regulation of mitochondrial DNA metabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.