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ONTOLOGY REPORT - ANNOTATIONS


Term:mitochondrial DNA metabolic process
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Accession:GO:0032042 term browser browse the term
Definition:The chemical reactions and pathways involving mitochondrial DNA.
Synonyms:exact_synonym: mitochondrial DNA metabolism;   mtDNA metabolic process;   mtDNA metabolism


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mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp1 poly(ADP-ribose) polymerase 1 JBrowse link NW_004955489 520,875 557,609 RGD:9068941
G Polg2 DNA polymerase gamma 2, accessory subunit JBrowse link NW_004955478 7,376,240 7,396,647 RGD:9068941
G Sesn2 sestrin 2 JBrowse link NW_004955452 7,392,644 7,417,204 RGD:9068941
G Tk2 thymidine kinase 2 JBrowse link NW_004955433 23,075,930 23,106,281 RGD:9068941
G Top3a DNA topoisomerase III alpha JBrowse link NW_004955478 11,015,378 11,045,717 RGD:9068941
mitochondrial DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link NW_004955429 16,911,392 16,921,353 RGD:9068941
G Dna2 DNA replication helicase/nuclease 2 JBrowse link NW_004955425 20,664,412 20,705,070 RGD:9068941
G Lig3 DNA ligase 3 JBrowse link NW_004955481 9,696,050 9,716,154 RGD:9068941
G Parp1 poly(ADP-ribose) polymerase 1 JBrowse link NW_004955489 520,875 557,609 RGD:9068941
G Primpol primase and DNA directed polymerase JBrowse link NW_004955403 24,278,727 24,307,312 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
negative regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flcn folliculin JBrowse link NW_004955577 672,774 694,140 RGD:9068941
positive regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppargc1a PPARG coactivator 1 alpha JBrowse link NW_004955480 543,397 1,188,376 RGD:9068941
regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mpv17 mitochondrial inner membrane protein MPV17 JBrowse link NW_004955469 9,279,540 9,292,012 RGD:9068941
G Stox1 storkhead box 1 JBrowse link NW_004955437 22,122,296 22,165,848 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11825
    cellular process 11033
      cellular metabolic process 6988
        cellular macromolecule metabolic process 5456
          DNA metabolic process 648
            mitochondrial DNA metabolic process 14
              DNA synthesis involved in mitochondrial DNA replication 0
              mitochondrial DNA catabolic process 0
              mitochondrial DNA repair 6
              mitochondrion DNA recombination 0
              negative regulation of mitochondrial DNA metabolic process 1
              positive regulation of mitochondrial DNA metabolic process 1
              regulation of mitochondrial DNA metabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 11825
    cellular process 11033
      cellular component organization or biogenesis 4817
        cellular component organization 4737
          organelle organization 2919
            mitochondrion organization 419
              mitochondrial genome maintenance 21
                mitochondrial DNA metabolic process 14
                  DNA synthesis involved in mitochondrial DNA replication 0
                  mitochondrial DNA catabolic process 0
                  mitochondrial DNA repair 6
                  mitochondrion DNA recombination 0
                  negative regulation of mitochondrial DNA metabolic process 1
                  positive regulation of mitochondrial DNA metabolic process 1
                  regulation of mitochondrial DNA metabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.