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ONTOLOGY REPORT - ANNOTATIONS


Term:mitochondrial DNA metabolic process
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Accession:GO:0032042 term browser browse the term
Definition:The chemical reactions and pathways involving mitochondrial DNA.
Synonyms:exact_synonym: mitochondrial DNA metabolism;   mtDNA metabolic process;   mtDNA metabolism


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mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:2290270
G Polg2 polymerase (DNA directed), gamma 2, accessory subunit JBrowse link 11 106,768,204 106,779,537 RGD:2290270
G Sesn2 sestrin 2 JBrowse link 4 132,492,804 132,510,456 RGD:2290270
G Tk2 thymidine kinase 2, mitochondrial JBrowse link 8 104,226,691 104,248,592 RGD:2290270
G Top3a topoisomerase (DNA) III alpha JBrowse link 11 60,738,209 60,777,365 RGD:2290270
mitochondrial DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 6 91,464,276 91,473,423 RGD:2290270
G Dna2 DNA replication helicase/nuclease 2 JBrowse link 10 62,946,983 62,974,188 RGD:2290270
G Lig3 ligase III, DNA, ATP-dependent JBrowse link 11 82,781,109 82,804,274 RGD:2290270
G Mgme1 mitochondrial genome maintenance exonuclease 1 JBrowse link 2 144,270,904 144,281,227 RGD:2290270
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:2290270
G Primpol primase and polymerase (DNA-directed) JBrowse link 8 46,575,579 46,617,227 RGD:2290270
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:2290270
negative regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flcn folliculin JBrowse link 11 59,791,408 59,810,039 RGD:2290270
positive regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha JBrowse link 5 51,454,249 52,115,853 RGD:2290270
regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mpv17 MpV17 mitochondrial inner membrane protein JBrowse link 5 31,140,663 31,154,251 RGD:2290270
G Stox1 storkhead box 1 JBrowse link 10 62,659,043 62,726,094 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23311
    cellular process 17299
      cellular metabolic process 10030
        cellular macromolecule metabolic process 7704
          DNA metabolic process 862
            mitochondrial DNA metabolic process 15
              DNA synthesis involved in mitochondrial DNA replication 0
              mitochondrial DNA catabolic process 0
              mitochondrial DNA repair 7
              mitochondrion DNA recombination 0
              negative regulation of mitochondrial DNA metabolic process 1
              positive regulation of mitochondrial DNA metabolic process 1
              regulation of mitochondrial DNA metabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 23311
    cellular process 17299
      cellular component organization or biogenesis 6355
        cellular component organization 6167
          organelle organization 3803
            mitochondrion organization 515
              mitochondrial genome maintenance 26
                mitochondrial DNA metabolic process 15
                  DNA synthesis involved in mitochondrial DNA replication 0
                  mitochondrial DNA catabolic process 0
                  mitochondrial DNA repair 7
                  mitochondrion DNA recombination 0
                  negative regulation of mitochondrial DNA metabolic process 1
                  positive regulation of mitochondrial DNA metabolic process 1
                  regulation of mitochondrial DNA metabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.