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ONTOLOGY REPORT - ANNOTATIONS


Term:mitochondrial DNA metabolic process
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Accession:GO:0032042 term browser browse the term
Definition:The chemical reactions and pathways involving mitochondrial DNA.
Synonyms:exact_synonym: mitochondrial DNA metabolism;   mtDNA metabolic process;   mtDNA metabolism


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mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp1 poly(ADP-ribose) polymerase 1 JBrowse link NW_004936526 3,102,468 3,147,601 RGD:9068941
G Polg2 DNA polymerase gamma 2, accessory subunit JBrowse link NW_004936541 4,988,469 5,004,110 RGD:9068941
G Sesn2 sestrin 2 JBrowse link NW_004936474 12,416,652 12,436,799 RGD:9068941
G Tk2 thymidine kinase 2 JBrowse link NW_004936475 16,851,380 16,875,195 RGD:9068941
G Top3a DNA topoisomerase III alpha JBrowse link NW_004936741 1,809,371 1,838,711 RGD:9068941
mitochondrial DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link NW_004936602 93,126 99,695 RGD:9068941
G Dna2 DNA replication helicase/nuclease 2 JBrowse link NW_004936521 9,843,867 9,884,248 RGD:9068941
G Lig3 DNA ligase 3 JBrowse link NW_004936538 206,179 228,487 RGD:9068941
G Parp1 poly(ADP-ribose) polymerase 1 JBrowse link NW_004936526 3,102,468 3,147,601 RGD:9068941
G Primpol primase and DNA directed polymerase JBrowse link NW_004936554 4,536,246 4,571,000 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004936595 919,807 935,367 RGD:9068941
negative regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flcn folliculin JBrowse link NW_004936741 881,150 901,296 RGD:9068941
positive regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppargc1a PPARG coactivator 1 alpha JBrowse link NW_004936477 4,881,230 5,488,208 RGD:9068941
regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mpv17 mitochondrial inner membrane protein MPV17 JBrowse link NW_004936493 5,246,803 5,258,147 RGD:9068941
G Stox1 storkhead box 1 JBrowse link NW_004936521 9,500,443 9,554,082 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11930
    cellular process 11111
      cellular metabolic process 7036
        cellular macromolecule metabolic process 5492
          DNA metabolic process 651
            mitochondrial DNA metabolic process 14
              DNA synthesis involved in mitochondrial DNA replication 0
              mitochondrial DNA catabolic process 0
              mitochondrial DNA repair 6
              mitochondrion DNA recombination 0
              negative regulation of mitochondrial DNA metabolic process 1
              positive regulation of mitochondrial DNA metabolic process 1
              regulation of mitochondrial DNA metabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 11930
    cellular process 11111
      cellular component organization or biogenesis 4869
        cellular component organization 4791
          organelle organization 2956
            mitochondrion organization 420
              mitochondrial genome maintenance 21
                mitochondrial DNA metabolic process 14
                  DNA synthesis involved in mitochondrial DNA replication 0
                  mitochondrial DNA catabolic process 0
                  mitochondrial DNA repair 6
                  mitochondrion DNA recombination 0
                  negative regulation of mitochondrial DNA metabolic process 1
                  positive regulation of mitochondrial DNA metabolic process 1
                  regulation of mitochondrial DNA metabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.