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ONTOLOGY REPORT - ANNOTATIONS


Term:telomere organization
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Accession:GO:0032200 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.
Synonyms:exact_synonym: chromosome organization, telomeric;   organization of chromosome, telomeric region;   telomere organisation
 related_synonym: telomere organization and biogenesis


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telomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD51 RAD51 recombinase JBrowse link 15 19,638,310 19,672,474 RGD:9068941
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 64,898,024 64,956,541 RGD:9068941
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,134,930 5,146,603 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 42,356,039 42,427,754 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 12,848,334 12,880,480 RGD:9068941
G XRCC1 X-ray repair cross complementing 1 JBrowse link 19 40,485,052 40,522,188 RGD:9068941
G XRCC4 X-ray repair cross complementing 4 JBrowse link 5 31,927,463 32,202,394 RGD:9068941
negative regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G XRCC5 X-ray repair cross complementing 5 JBrowse link 2B 103,371,459 103,468,419 RGD:9068941
negative regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 103,109,979 103,256,405 RGD:9068941
G NBN nibrin JBrowse link 8 86,622,797 86,674,202 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 5 127,972,630 128,059,911 RGD:9068941
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 17 2,050,825 2,294,892 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
negative regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 42,356,039 42,427,754 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 12,848,334 12,880,480 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 14 5,015,862 5,019,228 RGD:9068941
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 16 48,001,408 48,004,620 RGD:9068941
G CTC1 CST telomere replication complex component 1 JBrowse link 17 43,410,385 43,433,784 RGD:9068941
G DCP2 decapping mRNA 2 JBrowse link 5 108,333,091 108,377,119 RGD:9068941
G EXOSC10 exosome component 10 JBrowse link 1 9,829,922 9,865,092 RGD:9068941
G GNL3L G protein nucleolar 3 like JBrowse link X 46,733,431 46,825,139 RGD:9068941
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 12 34,456,900 34,463,317 RGD:9068941
G HNRNPC heterogeneous nuclear ribonucleoprotein C JBrowse link 14 2,022,280 2,083,215 RGD:9068941
G HNRNPU heterogeneous nuclear ribonucleoprotein U JBrowse link 1 220,450,218 220,461,412 RGD:9068941
G NAT10 N-acetyltransferase 10 JBrowse link 11 34,082,304 34,127,793 RGD:9068941
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 15 43,756,605 43,766,631 RGD:9068941
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 JBrowse link 8 8,366,819 8,443,359 RGD:9068941
G PML PML nuclear body scaffold JBrowse link 15 52,903,874 52,955,151 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 33,667,614 33,727,126 RGD:9068941
G STN1 STN1 subunit of CST complex JBrowse link 10 100,456,589 100,518,010 RGD:9068941
G TEN1 TEN1 subunit of CST complex JBrowse link 17 69,928,204 69,947,138 RGD:9068941
G TENT4B terminal nucleotidyltransferase 4B JBrowse link 16 30,415,668 30,494,758 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 14 5,015,862 5,019,228 RGD:9068941
negative regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 12,848,334 12,880,480 RGD:9068941
G MCRS1 microspherule protein 1 JBrowse link 12 39,183,112 39,192,925 RGD:9068941
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 201,820,355 201,867,673 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 2,502,334 2,532,172 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G TNKS tankyrase JBrowse link 8 9,435,412 9,654,810 RGD:9068941
G TNKS2 tankyrase 2 JBrowse link 10 88,547,396 88,612,973 RGD:9068941
negative regulation of telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
positive regulation of shelterin complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
positive regulation of subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIRT6 sirtuin 6 JBrowse link 19 3,196,092 3,204,602 RGD:9068941
positive regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 42,356,039 42,427,754 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 2,502,334 2,532,172 RGD:9068941
positive regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AURKB aurora kinase B JBrowse link 17 43,447,661 43,453,864 RGD:9068941
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 4 41,825,518 41,846,166 RGD:9068941
G MAP2K7 mitogen-activated protein kinase kinase 7 JBrowse link 19 7,205,124 7,215,776 RGD:9068941
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 6 158,937,424 159,062,550 RGD:9068941
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 3,883,119 3,990,368 RGD:9068941
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 8 140,468,365 140,474,604 RGD:9068941
G MAPK3 mitogen-activated protein kinase 3 RGD:9068941
G MAPKAPK5 MAPK activated protein kinase 5 JBrowse link 12 109,416,610 109,471,729 RGD:9068941
G NABP2 nucleic acid binding protein 2 JBrowse link 12 32,685,521 32,693,318 RGD:9068941
G NEK2 NIMA related kinase 2 JBrowse link 1 187,225,947 187,243,605 RGD:9068941
G NEK7 NIMA related kinase 7 JBrowse link 1 173,752,892 173,918,258 RGD:9068941
G PKIB cAMP-dependent protein kinase inhibitor beta JBrowse link 6 120,373,497 120,517,119 RGD:9068941
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 19 46,874,216 46,880,954 RGD:9068941
G PRKCQ protein kinase C theta JBrowse link 10 6,458,138 6,610,781 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
G TNKS tankyrase JBrowse link 8 9,435,412 9,654,810 RGD:9068941
G TNKS2 tankyrase 2 JBrowse link 10 88,547,396 88,612,973 RGD:9068941
positive regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATRX ATRX chromatin remodeler JBrowse link X 66,682,968 66,969,421 RGD:9068941
G DHX36 DEAH-box helicase 36 JBrowse link 3 151,331,468 151,382,406 RGD:9068941
G GNL3 G protein nucleolar 3 JBrowse link 3 52,626,424 52,635,009 RGD:9068941
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 89,418,537 89,500,705 RGD:9068941
G NBN nibrin JBrowse link 8 86,622,797 86,674,202 RGD:9068941
G PML PML nuclear body scaffold JBrowse link 15 52,903,874 52,955,151 RGD:9068941
G PPP1R10 protein phosphatase 1 regulatory subunit 10 JBrowse link 6 30,342,669 30,359,644 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 5 127,972,630 128,059,911 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
G SIRT6 sirtuin 6 JBrowse link 19 3,196,092 3,204,602 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 16 48,001,408 48,004,620 RGD:9068941
G ATM ATM serine/threonine kinase JBrowse link 11 103,109,979 103,256,405 RGD:9068941
G ATR ATR serine/threonine kinase JBrowse link 3 139,482,606 139,612,274 RGD:9068941
G AURKB aurora kinase B JBrowse link 17 43,447,661 43,453,864 RGD:9068941
G CCT2 chaperonin containing TCP1 subunit 2 JBrowse link 12 67,113,221 67,128,159 RGD:9068941
G CCT3 chaperonin containing TCP1 subunit 3 JBrowse link 1 131,652,058 131,679,802 RGD:9068941
G CCT4 chaperonin containing TCP1 subunit 4 JBrowse link 2A 61,950,477 61,970,783 RGD:9068941
G CCT5 chaperonin containing TCP1 subunit 5 JBrowse link 5 10,565,911 10,580,808 RGD:9068941
G CCT6A chaperonin containing TCP1 subunit 6A JBrowse link 7 56,664,757 56,677,000 RGD:9068941
G CCT7 chaperonin containing TCP1 subunit 7 JBrowse link 2A 73,287,026 73,305,792 RGD:9068941
G CCT8 chaperonin containing TCP1 subunit 8 JBrowse link 21 15,489,698 15,507,292 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,104,940 41,145,934 RGD:9068941
G DKC1 dyskerin pseudouridine synthase 1 JBrowse link X 144,243,493 144,257,419 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 5 68,336,673 68,474,481 RGD:9068941
G HMBOX1 homeobox containing 1 JBrowse link 8 28,173,256 28,350,591 RGD:9068941
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 12 34,456,900 34,463,317 RGD:9068941
G MAP2K7 mitogen-activated protein kinase kinase 7 JBrowse link 19 7,205,124 7,215,776 RGD:9068941
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 6 158,937,424 159,062,550 RGD:9068941
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 3,883,119 3,990,368 RGD:9068941
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 8 140,468,365 140,474,604 RGD:9068941
G MAPK3 mitogen-activated protein kinase 3 RGD:9068941
G MAPKAPK5 MAPK activated protein kinase 5 JBrowse link 12 109,416,610 109,471,729 RGD:9068941
G NEK2 NIMA related kinase 2 JBrowse link 1 187,225,947 187,243,605 RGD:9068941
G NEK7 NIMA related kinase 7 JBrowse link 1 173,752,892 173,918,258 RGD:9068941
G PARN poly(A)-specific ribonuclease JBrowse link 16 13,363,879 13,556,054 RGD:9068941
G PKIB cAMP-dependent protein kinase inhibitor beta JBrowse link 6 120,373,497 120,517,119 RGD:9068941
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 19 46,874,216 46,880,954 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G PRKCQ protein kinase C theta JBrowse link 10 6,458,138 6,610,781 RGD:9068941
G TCP1 t-complex 1 JBrowse link 6 157,661,409 157,672,581 RGD:9068941
G TNKS tankyrase JBrowse link 8 9,435,412 9,654,810 RGD:9068941
G XRCC5 X-ray repair cross complementing 5 JBrowse link 2B 103,371,459 103,468,419 RGD:9068941
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 103,109,979 103,256,405 RGD:9068941
G DHX36 DEAH-box helicase 36 JBrowse link 3 151,331,468 151,382,406 RGD:9068941
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 7 26,835,881 26,846,578 RGD:9068941
G NAF1 nuclear assembly factor 1 ribonucleoprotein JBrowse link 4 155,383,245 155,425,479 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
positive regulation of telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 16 48,001,408 48,004,620 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 1 88,643,664 88,651,962 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 16 56,216,920 56,226,612 RGD:9068941
regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HDAC8 histone deacetylase 8 JBrowse link X 61,565,790 61,811,588 RGD:9068941
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 4 41,825,518 41,846,166 RGD:9068941
G LMNA lamin A/C JBrowse link 1 131,456,819 131,482,275 RGD:9068941
G LOC103783967 SMG1 nonsense mediated mRNA decay associated PI3K related kinase JBrowse link 16 19,433,999 19,475,539 RGD:9068941
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 124,387,561 124,393,551 RGD:9068941
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 15 43,756,605 43,766,631 RGD:9068941
G SMG5 SMG5 nonsense mediated mRNA decay factor JBrowse link 1 131,592,368 131,634,443 RGD:9068941
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 17 2,050,825 2,294,892 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,269,878 18,306,199 RGD:9068941
G YLPM1 YLP motif containing 1 JBrowse link 14 55,315,429 55,388,330 RGD:9068941
regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 103,109,979 103,256,405 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 14 5,015,862 5,019,228 RGD:9068941
subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100970414 histone H3.3A JBrowse link 1 201,523,670 201,533,005 RGD:9068941
G LOC100988671 histone H3.3A JBrowse link 17 69,728,165 69,730,519 RGD:9068941
t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 42,356,039 42,427,754 RGD:9068941
G NBN nibrin JBrowse link 8 86,622,797 86,674,202 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 2,502,334 2,532,172 RGD:9068941
G XRCC3 X-ray repair cross complementing 3 JBrowse link 14 84,323,644 84,341,763 RGD:9068941
telomere assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 16 48,001,408 48,004,620 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 14 5,015,862 5,019,228 RGD:9068941
telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 16 48,001,408 48,004,620 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 1 88,643,664 88,651,962 RGD:9068941
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 7 26,835,881 26,846,578 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 8 44,201,391 44,386,803 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 14 5,015,862 5,019,228 RGD:9068941
telomere formation via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WRAP53 WD repeat containing antisense to TP53 JBrowse link 17 7,715,897 7,735,873 RGD:9068941
telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 16 48,001,408 48,004,620 RGD:9068941
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 14 1,329,745 1,332,315 RGD:9068941
G BLM BLM RecQ like helicase JBrowse link 15 69,407,248 69,508,070 RGD:9068941
G CCNE1 cyclin E1 JBrowse link 19 26,739,285 26,751,630 RGD:9068941
G CCNE2 cyclin E2 JBrowse link 8 91,499,647 91,518,488 RGD:9068941
G CTC1 CST telomere replication complex component 1 JBrowse link 17 43,410,385 43,433,784 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 1 88,643,664 88,651,962 RGD:9068941
G DCLRE1C DNA cross-link repair 1C JBrowse link 10 14,901,335 14,956,947 RGD:9068941
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 10 64,898,024 64,956,541 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 12,848,334 12,880,480 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 5 68,336,673 68,474,481 RGD:9068941
G HSPA1A heat shock protein family A (Hsp70) member 1A JBrowse link 6 31,476,710 31,491,411 RGD:9068941
G NBN nibrin JBrowse link 8 86,622,797 86,674,202 RGD:9068941
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 201,820,355 201,867,673 RGD:9068941
G PARP3 poly(ADP-ribose) polymerase family member 3 JBrowse link 3 51,883,695 51,890,266 RGD:9068941
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 8 44,201,391 44,386,803 RGD:9068941
G RAD51D RAD51 paralog D JBrowse link 17 21,666,236 21,693,886 RGD:9068941
G RIF1 replication timing regulatory factor 1 JBrowse link 2B 38,721,658 38,818,488 RGD:9068941
G RPA1 replication protein A1 JBrowse link 17 1,813,610 1,886,093 RGD:9068941
G RPA2 replication protein A2 JBrowse link 1 27,151,784 27,175,110 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
G SP100 SP100 nuclear antigen JBrowse link 2B 117,673,152 117,799,911 RGD:9068941
G STN1 STN1 subunit of CST complex JBrowse link 10 100,456,589 100,518,010 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G TNKS2 tankyrase 2 JBrowse link 10 88,547,396 88,612,973 RGD:9068941
G WRN WRN RecQ like helicase JBrowse link 8 30,353,643 30,492,978 RGD:9068941
G ZNF365 zinc finger protein 365 JBrowse link 10 58,894,939 58,923,176 RGD:9068941
telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RIF1 replication timing regulatory factor 1 JBrowse link 2B 38,721,658 38,818,488 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
telomere maintenance via base-excision repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 14 1,329,745 1,332,315 RGD:9068941
telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 13,574,422 13,658,967 RGD:9068941
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase JBrowse link 8 121,777,986 122,052,094 RGD:9068941
G RAD51 RAD51 recombinase JBrowse link 15 19,638,310 19,672,474 RGD:9068941
G RAD51C RAD51 paralog C JBrowse link 17 52,769,446 52,808,467 RGD:9068941
G SMC5 structural maintenance of chromosomes 5 JBrowse link 9 54,446,863 54,543,249 RGD:9068941
G SMC6 structural maintenance of chromosomes 6 JBrowse link 2A 17,648,371 17,735,910 RGD:9068941
G TEP1 telomerase associated protein 1 JBrowse link 14 1,240,370 1,285,787 RGD:9068941
G XRCC3 X-ray repair cross complementing 3 JBrowse link 14 84,323,644 84,341,763 RGD:9068941
telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,269,878 18,306,199 RGD:9068941
telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DKC1 dyskerin pseudouridine synthase 1 JBrowse link X 144,243,493 144,257,419 RGD:9068941
G GAR1 GAR1 ribonucleoprotein JBrowse link 4 102,311,275 102,320,579 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 14 82,700,881 82,707,020 RGD:9068941
G HSP90AB1 heat shock protein 90 alpha family class B member 1 JBrowse link 6 43,842,796 43,849,637 RGD:9068941
G NHP2 NHP2 ribonucleoprotein JBrowse link 5 173,308,560 173,313,046 RGD:9068941
G NOP10 NOP10 ribonucleoprotein JBrowse link 15 12,850,708 12,852,171 RGD:9068941
G PARP4 poly(ADP-ribose) polymerase family member 4 JBrowse link 13 5,734,322 5,827,323 RGD:9068941
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 JBrowse link 8 8,366,819 8,443,359 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G PTGES3 prostaglandin E synthase 3 JBrowse link 12 32,221,908 32,247,228 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 5 127,972,630 128,059,911 RGD:9068941
G TEP1 telomerase associated protein 1 JBrowse link 14 1,240,370 1,285,787 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
G TERT telomerase reverse transcriptase JBrowse link 5 1,542,217 1,586,775 RGD:9068941
G WRAP53 WD repeat containing antisense to TP53 JBrowse link 17 7,715,897 7,735,873 RGD:9068941
telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTC1 CST telomere replication complex component 1 JBrowse link 17 43,410,385 43,433,784 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 1 88,643,664 88,651,962 RGD:9068941
G RAD51 RAD51 recombinase JBrowse link 15 19,638,310 19,672,474 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit RGD:9068941
G STN1 STN1 subunit of CST complex JBrowse link 10 100,456,589 100,518,010 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 16 56,216,920 56,226,612 RGD:9068941
G ZBTB48 zinc finger and BTB domain containing 48 JBrowse link 1 5,341,282 5,350,590 RGD:9068941
telomere maintenance via telomere trimming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NBN nibrin JBrowse link 8 86,622,797 86,674,202 RGD:9068941
G XRCC3 X-ray repair cross complementing 3 JBrowse link 14 84,323,644 84,341,763 RGD:9068941
telomeric 3' overhang formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DCLRE1B DNA cross-link repair 1B JBrowse link 1 88,643,664 88,651,962 RGD:9068941
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 89,418,537 89,500,705 RGD:9068941
G NBN nibrin JBrowse link 8 86,622,797 86,674,202 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 5 127,972,630 128,059,911 RGD:9068941
telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BLM BLM RecQ like helicase JBrowse link 15 69,407,248 69,508,070 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 16 2,502,334 2,532,172 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G WRN WRN RecQ like helicase JBrowse link 8 30,353,643 30,492,978 RGD:9068941
telomeric DNA-containing double minutes formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 42,356,039 42,427,754 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 16 12,848,334 12,880,480 RGD:9068941
G XRCC1 X-ray repair cross complementing 1 JBrowse link 19 40,485,052 40,522,188 RGD:9068941
G XRCC4 X-ray repair cross complementing 4 JBrowse link 5 31,927,463 32,202,394 RGD:9068941
telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 RGD:9068941
telomeric loop formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DCLRE1B DNA cross-link repair 1B JBrowse link 1 88,643,664 88,651,962 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 7 116,807,913 116,926,998 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 16 49,729,906 49,763,002 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 16 56,216,920 56,226,612 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12490
    cellular process 11599
      cellular component organization or biogenesis 4957
        cellular component organization 4877
          organelle organization 3003
            chromosome organization 874
              telomere organization 118
                shelterin complex assembly + 1
                subtelomeric heterochromatin assembly + 3
                subtelomeric heterochromatin organization + 3
                telomere assembly + 7
                telomere maintenance + 116
                telomere-telomerase complex assembly 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.