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ONTOLOGY REPORT - ANNOTATIONS


Term:telomere organization
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Accession:GO:0032200 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.
Synonyms:exact_synonym: chromosome organization, telomeric;   organization of chromosome, telomeric region;   telomere organisation
 related_synonym: telomere organization and biogenesis


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telomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD51 RAD51 recombinase JBrowse link 30 7,842,540 7,877,128 RGD:9068941
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 4 19,626,001 19,683,819 RGD:13508589
G PCNA proliferating cell nuclear antigen JBrowse link 24 16,478,774 16,485,992 RGD:13508589
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:9068941
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 110,130,353 110,146,660 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 6 29,193,192 29,226,935 RGD:13508589
G XRCC1 X-ray repair cross complementing 1 JBrowse link 1 111,548,719 111,571,816 RGD:13508589
G XRCC4 X-ray repair cross complementing 4 JBrowse link 3 24,316,598 24,547,463 RGD:9068941
negative regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
G XRCC5 X-ray repair cross complementing 5 JBrowse link 37 23,095,769 23,185,680 RGD:13508589
negative regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 5 24,180,129 24,297,207 RGD:13508589
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:13508589
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:9068941
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 9 46,162,991 46,405,856 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
negative regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 110,130,353 110,146,660 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 6 29,193,192 29,226,935 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 5 75,164,410 75,172,959 RGD:13508589
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 8 4,221,183 4,223,863 RGD:9068941
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:9068941
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:13508589
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 5 81,789,915 81,792,725 RGD:9068941
G CTC1 CST telomere replication complex component 1 JBrowse link 5 33,033,474 33,055,004 RGD:9068941
G DCP2 decapping mRNA 2 JBrowse link 4 35,256,772 35,298,974 RGD:13508589
G EXOSC10 exosome component 10 JBrowse link 2 84,942,801 84,964,129 RGD:9068941
G GNL3L G protein nucleolar 3 like JBrowse link X 46,270,162 46,296,972 RGD:13508589
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 27 1,013,459 1,020,083 RGD:13508589
G HNRNPC heterogeneous nuclear ribonucleoprotein C JBrowse link 15 18,239,810 18,299,065 RGD:9068941
G HNRNPU heterogeneous nuclear ribonucleoprotein U JBrowse link 7 35,832,956 35,842,898 RGD:13508589
G NAT10 N-acetyltransferase 10 JBrowse link 18 33,654,701 33,692,642 RGD:13508589
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 30 29,223,507 29,232,584 RGD:13508589
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 JBrowse link 25 27,090,244 27,182,377 RGD:9068941
G PML PML nuclear body scaffold JBrowse link 30 37,232,337 37,278,434 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G RBPMS2 RNA binding protein, mRNA processing factor 2 JBrowse link 30 29,160,879 29,187,231 RGD:13508589
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 24 25,982,499 26,019,748 RGD:9068941
G STN1 STN1 subunit of CST complex JBrowse link 28 16,203,607 16,246,468 RGD:13508589
G TEN1 TEN1 subunit of CST complex JBrowse link 9 4,635,192 4,658,455 RGD:13508589
G TENT4B terminal nucleotidyltransferase 4B JBrowse link 2 65,068,088 65,147,853 RGD:13508589
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 8 4,221,183 4,223,863 RGD:13508589
negative regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 6 29,193,192 29,226,935 RGD:13508589
G MCRS1 microspherule protein 1 JBrowse link 27 5,076,075 5,085,483 RGD:9068941
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 7 38,503,072 38,542,556 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 6 18,171,190 18,174,577 RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 6 37,648,297 37,666,584 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
G TNKS tankyrase JBrowse link 16 34,826,248 35,040,004 RGD:13508589
G TNKS2 tankyrase 2 JBrowse link 28 6,286,125 6,354,284 RGD:13508589
negative regulation of telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:13508589
positive regulation of shelterin complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:13508589
positive regulation of subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIRT6 sirtuin 6 JBrowse link 20 55,412,989 55,424,944 RGD:13508589
positive regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 110,130,353 110,146,660 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 6 18,171,190 18,174,577 RGD:13508589
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 6 37,648,297 37,666,584 RGD:13508589
positive regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD23 ankyrin repeat domain 23 JBrowse link 10 45,128,411 45,134,234 RGD:13508589
G ANKRD39 ankyrin repeat domain 39 JBrowse link 10 45,117,875 45,126,556 RGD:13508589
G AURKB aurora kinase B JBrowse link 5 33,014,098 33,028,951 RGD:13508589
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 32 6,323,444 6,341,238 RGD:13508589
G MAP2K7 mitogen-activated protein kinase kinase 7 JBrowse link 20 52,594,450 52,604,236 RGD:13508589
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 1 49,590,615 49,702,289 RGD:9068941
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 26 31,013,607 31,132,998 RGD:13508589
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 13 37,317,061 37,322,792 RGD:9068941
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 6 18,109,184 18,115,728 RGD:9068941
G MAPKAPK5 MAPK activated protein kinase 5 JBrowse link 26 9,380,551 9,420,564 RGD:13508589
G NABP2 nucleic acid binding protein 2 JBrowse link 10 546,964 551,360 RGD:13508589
G NEK2 NIMA related kinase 2 JBrowse link 7 10,039,617 10,052,511 RGD:13508589
G NEK7 NIMA related kinase 7 JBrowse link 7 4,557,754 4,755,912 RGD:9068941
G PKIB cAMP-dependent protein kinase inhibitor beta JBrowse link 1 61,960,466 62,049,553 RGD:9068941
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 1 106,695,649 106,707,229 RGD:9068941
G PRKCQ protein kinase C theta JBrowse link 2 29,319,123 29,505,338 RGD:13508589
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:9068941
G TNKS tankyrase JBrowse link 16 34,826,248 35,040,004 RGD:13508589
G TNKS2 tankyrase 2 JBrowse link 28 6,286,125 6,354,284 RGD:13508589
positive regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATRX ATRX chromatin remodeler JBrowse link X 59,772,067 60,107,016 RGD:13508589
G DHX36 DEAH-box helicase 36 JBrowse link 23 48,404,351 48,456,360 RGD:9068941
G GNL3 G protein nucleolar 3 JBrowse link 20 37,103,298 37,110,350 RGD:13508589
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 21 6,448,909 6,528,185 RGD:13508589
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:13508589
G PML PML nuclear body scaffold JBrowse link 30 37,232,337 37,278,434 RGD:9068941
G PPP1R10 protein phosphatase 1 regulatory subunit 10 JBrowse link 12 416,533 434,777 RGD:13508589
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:9068941
G SIRT6 sirtuin 6 JBrowse link 20 55,412,989 55,424,944 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 5 81,789,915 81,792,725 RGD:9068941
G ATM ATM serine/threonine kinase JBrowse link 5 24,180,129 24,297,207 RGD:13508589
G ATR ATR serine/threonine kinase JBrowse link 23 38,131,956 38,223,888 RGD:9068941
G AURKB aurora kinase B JBrowse link 5 33,014,098 33,028,951 RGD:13508589
G CCT2 chaperonin containing TCP1 subunit 2 JBrowse link 10 11,560,287 11,586,559 RGD:9068941
G CCT3 chaperonin containing TCP1 subunit 3 JBrowse link 7 41,566,274 41,583,903 RGD:13508589
G CCT4 chaperonin containing TCP1 subunit 4 JBrowse link 10 61,859,148 61,874,030 RGD:13508589
G CCT5 chaperonin containing TCP1 subunit 5 JBrowse link 34 4,035,851 4,049,131 RGD:13508589
G CCT6A chaperonin containing TCP1 subunit 6A JBrowse link 6 546,278 556,996 RGD:9068941
G CCT8 chaperonin containing TCP1 subunit 8 JBrowse link 31 24,061,185 24,075,002 RGD:13508589
G CTNNB1 catenin beta 1 JBrowse link 23 10,559,722 10,572,933 RGD:13508589
G DKC1 dyskerin pseudouridine synthase 1 JBrowse link X 122,838,787 122,850,870 RGD:13508589
G FBXO4 F-box protein 4 JBrowse link 4 67,620,947 67,664,862 RGD:13508589
G HMBOX1 homeobox containing 1 JBrowse link 25 28,489,472 28,679,322 RGD:13508589
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 27 1,013,459 1,020,083 RGD:13508589
G LOC100856782 T-complex protein 1 subunit eta RGD:9068941
G MAP2K7 mitogen-activated protein kinase kinase 7 JBrowse link 20 52,594,450 52,604,236 RGD:13508589
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 1 49,590,615 49,702,289 RGD:9068941
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 26 31,013,607 31,132,998 RGD:13508589
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 13 37,317,061 37,322,792 RGD:9068941
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 6 18,109,184 18,115,728 RGD:9068941
G MAPKAPK5 MAPK activated protein kinase 5 JBrowse link 26 9,380,551 9,420,564 RGD:13508589
G NEK2 NIMA related kinase 2 JBrowse link 7 10,039,617 10,052,511 RGD:13508589
G NEK7 NIMA related kinase 7 JBrowse link 7 4,557,754 4,755,912 RGD:9068941
G PARN poly(A)-specific ribonuclease JBrowse link 6 28,629,137 28,783,671 RGD:9068941
G PKIB cAMP-dependent protein kinase inhibitor beta JBrowse link 1 61,960,466 62,049,553 RGD:9068941
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 1 106,695,649 106,707,229 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G PRKCQ protein kinase C theta JBrowse link 2 29,319,123 29,505,338 RGD:13508589
G TCP1 t-complex 1 JBrowse link 1 49,029,260 49,038,023 RGD:13508589
G TNKS tankyrase JBrowse link 16 34,826,248 35,040,004 RGD:13508589
G XRCC5 X-ray repair cross complementing 5 JBrowse link 37 23,095,769 23,185,680 RGD:13508589
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 5 24,180,129 24,297,207 RGD:9068941
G DHX36 DEAH-box helicase 36 JBrowse link 23 48,404,351 48,456,360 RGD:13508589
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 14 39,498,805 39,509,034 RGD:9068941
G NAF1 nuclear assembly factor 1 ribonucleoprotein JBrowse link 15 59,430,809 59,470,306 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:9068941
positive regulation of telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:9068941
protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 5 81,789,915 81,792,725 RGD:13508589
G DCLRE1A DNA cross-link repair 1A JBrowse link 28 24,704,044 24,724,561 RGD:13508589
G DCLRE1B DNA cross-link repair 1B JBrowse link 17 51,711,267 51,716,806 RGD:13508589
G DCLRE1C DNA cross-link repair 1C JBrowse link 2 21,688,822 21,725,021 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:13508589
G TERF2IP TERF2 interacting protein JBrowse link 5 75,164,410 75,172,959 RGD:13508589
RGD:9068941
regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HDAC8 histone deacetylase 8 JBrowse link X 56,357,205 56,574,443 RGD:9068941
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 32 6,323,444 6,341,238 RGD:9068941
G LMNA lamin A/C JBrowse link 7 41,702,491 41,719,870 RGD:9068941
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 13 25,200,772 25,205,309 RGD:13508589
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 30 29,223,507 29,232,584 RGD:9068941
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase JBrowse link 6 26,224,837 26,306,394 RGD:13508589
G SMG5 SMG5 nonsense mediated mRNA decay factor JBrowse link 7 41,598,111 41,624,575 RGD:9068941
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 9 46,162,991 46,405,856 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 5 75,164,410 75,172,959 RGD:9068941
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 20 44,234,411 44,271,129 RGD:13508589
G YLPM1 YLP motif containing 1 JBrowse link 8 47,878,176 47,957,714 RGD:13508589
regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 5 24,180,129 24,297,207 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G SMG5 SMG5 nonsense mediated mRNA decay factor JBrowse link 7 41,598,111 41,624,575 RGD:13508589
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 9 46,162,991 46,405,856 RGD:13508589
G SMG7 SMG7 nonsense mediated mRNA decay factor JBrowse link 7 16,820,938 16,913,359 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:13508589
regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 8 4,221,183 4,223,863 RGD:13508589
subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G H3-3A H3.3 histone A JBrowse link 7 38,797,168 38,805,417 RGD:13508589
G H3-3B H3.3 histone B JBrowse link 9 4,805,655 4,808,076 RGD:13508589
t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 110,130,353 110,146,660 RGD:9068941
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:13508589
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 6 18,171,190 18,174,577 RGD:13508589
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 6 37,648,297 37,666,584 RGD:13508589
G XRCC3 X-ray repair cross complementing 3 JBrowse link 8 71,441,732 71,452,922 RGD:13508589
telomere assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 5 81,789,915 81,792,725 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 8 4,221,183 4,223,863 RGD:13508589
telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 5 81,789,915 81,792,725 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 17 51,711,267 51,716,806 RGD:9068941
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 14 39,498,805 39,509,034 RGD:9068941
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:13508589
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 29 24,904 243,926 RGD:13508589
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:13508589
G STN1 STN1 subunit of CST complex JBrowse link 28 16,203,607 16,246,468 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 8 4,221,183 4,223,863 RGD:13508589
telomere formation via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WRAP53 WD repeat containing antisense to TP53 JBrowse link 5 32,574,153 32,586,222 RGD:9068941
telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 5 81,789,915 81,792,725 RGD:9068941
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 15 17,786,808 17,789,422 RGD:9068941
G ATM ATM serine/threonine kinase JBrowse link 5 24,180,129 24,297,207 RGD:13508589
G ATR ATR serine/threonine kinase JBrowse link 23 38,131,956 38,223,888 RGD:13508589
G BLM BLM RecQ like helicase JBrowse link 3 53,408,120 53,506,728 RGD:13508589
G CCNE1 cyclin E1 JBrowse link 1 121,688,622 121,697,533 RGD:13508589
G CCNE2 cyclin E2 JBrowse link 29 39,534,872 39,551,141 RGD:13508589
G CTC1 CST telomere replication complex component 1 JBrowse link 5 33,033,474 33,055,004 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 17 51,711,267 51,716,806 RGD:9068941
G DCLRE1C DNA cross-link repair 1C JBrowse link 2 21,688,822 21,725,021 RGD:9068941
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 4 19,626,001 19,683,819 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 6 29,193,192 29,226,935 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 4 67,620,947 67,664,862 RGD:9068941
G HUS1 HUS1 checkpoint clamp component JBrowse link 16 93,596 104,908 RGD:13508589
G LTO1 LTO1 maturation factor of ABCE1 JBrowse link 18 48,482,212 48,490,678 RGD:13508589
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 21 6,448,909 6,528,185 RGD:13508589
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:9068941
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 7 38,503,072 38,542,556 RGD:9068941
G PARP3 poly(ADP-ribose) polymerase family member 3 JBrowse link 20 37,767,336 37,774,269 RGD:13508589
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 30 29,223,507 29,232,584 RGD:13508589
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 29 24,904 243,926 RGD:13508589
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:13508589
G RAD51D RAD51 paralog D JBrowse link 9 38,242,178 38,259,788 RGD:13508589
G RBPMS2 RNA binding protein, mRNA processing factor 2 JBrowse link 30 29,160,879 29,187,231 RGD:13508589
G RECQL4 RecQ like helicase 4 JBrowse link 13 37,930,906 37,936,653 RGD:9068941
G RIF1 replication timing regulatory factor 1 JBrowse link 19 52,661,278 52,711,969 RGD:13508589
G RPA1 replication protein A1 JBrowse link 9 45,958,566 46,034,850 RGD:13508589
G RPA2 replication protein A2 JBrowse link 2 72,463,951 72,479,864 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:13508589
G SP100 SP100 nuclear antigen JBrowse link 25 42,538,428 42,635,825 RGD:9068941
G STN1 STN1 subunit of CST complex JBrowse link 28 16,203,607 16,246,468 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 5 75,164,410 75,172,959 RGD:13508589
G TNKS2 tankyrase 2 JBrowse link 28 6,286,125 6,354,284 RGD:9068941
G WRN WRN RecQ like helicase JBrowse link 16 33,164,662 33,304,466 RGD:9068941
G XRCC5 X-ray repair cross complementing 5 JBrowse link 37 23,095,769 23,185,680 RGD:13508589
G XRCC6 X-ray repair cross complementing 6 JBrowse link 10 23,637,905 23,661,618 RGD:13508589
G ZNF365 zinc finger protein 365 JBrowse link 4 14,297,652 14,429,634 RGD:13508589
telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RIF1 replication timing regulatory factor 1 JBrowse link 19 52,661,278 52,711,969 RGD:13508589
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:9068941
telomere maintenance via base-excision repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 15 17,786,808 17,789,422 RGD:13508589
telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA2 BRCA2 DNA repair associated JBrowse link 25 7,734,450 7,797,851 RGD:13508589
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase JBrowse link 13 23,078,143 23,288,302 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:13508589
G RAD51 RAD51 recombinase JBrowse link 30 7,842,540 7,877,128 RGD:13508589
G RAD51C RAD51 paralog C JBrowse link 9 33,289,675 33,347,411 RGD:13508589
G SMC5 structural maintenance of chromosomes 5 JBrowse link 1 87,192,988 87,285,678 RGD:9068941
G SMC6 structural maintenance of chromosomes 6 JBrowse link 17 13,132,945 13,201,214 RGD:9068941
G TEP1 telomerase associated protein 1 JBrowse link 15 17,716,887 17,748,485 RGD:13508589
G XRCC3 X-ray repair cross complementing 3 JBrowse link 8 71,441,732 71,452,922 RGD:13508589
telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 20 44,234,411 44,271,129 RGD:13508589
telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP5F1B ATP synthase F1 subunit beta JBrowse link 10 870,405 876,937 RGD:13508589
G DKC1 dyskerin pseudouridine synthase 1 JBrowse link X 122,838,787 122,850,870 RGD:13508589
G GAR1 GAR1 ribonucleoprotein JBrowse link 32 29,995,710 30,004,545 RGD:13508589
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 8 70,091,203 70,096,107 RGD:9068941
G HSP90AB1 heat shock protein 90 alpha family class B member 1 JBrowse link 12 12,658,415 12,664,945 RGD:13508589
G NHP2 NHP2 ribonucleoprotein JBrowse link 11 3,389,549 3,393,010 RGD:9068941
G NOP10 NOP10 ribonucleoprotein JBrowse link 30 766,801 767,615 RGD:13508589
G PARP4 poly(ADP-ribose) polymerase family member 4 JBrowse link 25 18,447,413 18,544,990 RGD:9068941
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 JBrowse link 25 27,090,244 27,182,377 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G PTGES3 prostaglandin E synthase 3 JBrowse link 10 885,744 903,814 RGD:13508589
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:13508589
G RPA1 replication protein A1 JBrowse link 9 45,958,566 46,034,850 RGD:13508589
G SMG5 SMG5 nonsense mediated mRNA decay factor JBrowse link 7 41,598,111 41,624,575 RGD:13508589
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 9 46,162,991 46,405,856 RGD:13508589
G SMG7 SMG7 nonsense mediated mRNA decay factor JBrowse link 7 16,820,938 16,913,359 RGD:13508589
G TELO2 telomere maintenance 2 JBrowse link 6 39,309,224 39,320,215 RGD:13508589
G TEP1 telomerase associated protein 1 JBrowse link 15 17,716,887 17,748,485 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:13508589
G TERT telomerase reverse transcriptase JBrowse link 34 11,288,622 11,307,790 RGD:13508589
G WRAP53 WD repeat containing antisense to TP53 JBrowse link 5 32,574,153 32,586,222 RGD:9068941
telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTC1 CST telomere replication complex component 1 JBrowse link 5 33,033,474 33,055,004 RGD:13508589
G DCLRE1B DNA cross-link repair 1B JBrowse link 17 51,711,267 51,716,806 RGD:13508589
G RAD51 RAD51 recombinase JBrowse link 30 7,842,540 7,877,128 RGD:13508589
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 6 18,171,190 18,174,577 RGD:9068941
G STN1 STN1 subunit of CST complex JBrowse link 28 16,203,607 16,246,468 RGD:13508589
G TERF2IP TERF2 interacting protein JBrowse link 5 75,164,410 75,172,959 RGD:13508589
G ZBTB48 zinc finger and BTB domain containing 48 JBrowse link 5 60,406,145 60,413,532 RGD:13508589
telomere maintenance via telomere trimming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:9068941
G XRCC3 X-ray repair cross complementing 3 JBrowse link 8 71,441,732 71,452,922 RGD:9068941
telomeric 3' overhang formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DCLRE1B DNA cross-link repair 1B JBrowse link 17 51,711,267 51,716,806 RGD:13508589
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 21 6,448,909 6,528,185 RGD:13508589
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:13508589
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:9068941
telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BLM BLM RecQ like helicase JBrowse link 3 53,408,120 53,506,728 RGD:13508589
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:13508589
G RECQL4 RecQ like helicase 4 JBrowse link 13 37,930,906 37,936,653 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 6 18,171,190 18,174,577 RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 6 37,648,297 37,666,584 RGD:13508589
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:13508589
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:13508589
G WRN WRN RecQ like helicase JBrowse link 16 33,164,662 33,304,466 RGD:13508589
telomeric DNA-containing double minutes formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 110,130,353 110,146,660 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 6 29,193,192 29,226,935 RGD:13508589
G XRCC1 X-ray repair cross complementing 1 JBrowse link 1 111,548,719 111,571,816 RGD:13508589
G XRCC4 X-ray repair cross complementing 4 JBrowse link 3 24,316,598 24,547,463 RGD:9068941
telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 24 47,219,977 47,248,791 RGD:13508589
telomeric loop formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DCLRE1B DNA cross-link repair 1B JBrowse link 17 51,711,267 51,716,806 RGD:13508589
G POT1 protection of telomeres 1 JBrowse link 14 10,987,385 11,067,473 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 5 80,278,224 80,305,315 RGD:13508589
G TERF2IP TERF2 interacting protein JBrowse link 5 75,164,410 75,172,959 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16042
    cellular process 15297
      cellular component organization or biogenesis 5950
        cellular component organization 5787
          organelle organization 3647
            chromosome organization 1083
              telomere organization 128
                shelterin complex assembly + 1
                subtelomeric heterochromatin assembly + 3
                subtelomeric heterochromatin organization + 3
                telomere assembly + 7
                telomere maintenance + 126
                telomere-telomerase complex assembly 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.