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ONTOLOGY REPORT - ANNOTATIONS


Term:telomere organization
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Accession:GO:0032200 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.
Synonyms:exact_synonym: chromosome organization, telomeric;   organization of chromosome, telomeric region;   telomere organisation
 related_synonym: telomere organization and biogenesis


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telomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rad51 RAD51 recombinase JBrowse link 2 119,112,814 119,136,073 RGD:2290270
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dna2 DNA replication helicase/nuclease 2 JBrowse link 10 62,946,983 62,974,188 RGD:2290270
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:2290270
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 JBrowse link 7 19,344,067 19,356,524 RGD:2290270
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 JBrowse link 16 13,109,366 13,152,009 RGD:2290270
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 JBrowse link 7 24,546,699 24,573,438 RGD:2290270
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 JBrowse link 13 89,848,914 90,089,608 RGD:2290270
negative regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 JBrowse link 1 72,307,417 72,394,953 RGD:2290270
negative regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:2290270
G Nbn nibrin JBrowse link 4 15,957,587 15,992,589 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Smg6 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) JBrowse link 11 74,925,854 75,164,448 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
negative regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 JBrowse link 7 19,344,067 19,356,524 RGD:2290270
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 JBrowse link 16 13,109,366 13,152,009 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Terf2ip telomeric repeat binding factor 2, interacting protein JBrowse link 8 112,011,359 112,020,528 RGD:2290270
G Tinf2 Terf1 (TRF1)-interacting nuclear factor 2 JBrowse link 14 55,676,208 55,682,159 RGD:2290270
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd adrenocortical dysplasia JBrowse link 8 105,698,155 105,701,228 RGD:2290270
G Ctc1 CTS telomere maintenance complex component 1 JBrowse link 11 69,015,188 69,036,473 RGD:2290270
G Dcp2 decapping mRNA 2 JBrowse link 18 44,380,500 44,424,969 RGD:2290270
G Exosc10 exosome component 10 JBrowse link 4 148,558,419 148,582,401 RGD:2290270
G Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like JBrowse link X 150,983,133 151,017,322 RGD:2290270
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 15 103,239,943 103,246,698 RGD:9068941
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link 14 52,073,377 52,104,039 RGD:2290270
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 1 178,321,108 178,338,891 RGD:2290270
G Nat10 N-acetyltransferase 10 JBrowse link 2 103,721,258 103,762,954 RGD:2290270
G Pif1 PIF1 5'-to-3' DNA helicase JBrowse link 9 65,587,150 65,595,967 RGD:2290270
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 JBrowse link 14 63,860,277 63,919,862 RGD:2290270
G Pml promyelocytic leukemia JBrowse link 9 58,217,179 58,249,796 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Src Rous sarcoma oncogene JBrowse link 2 157,423,906 157,471,838 RGD:2290270
G Stn1 STN1, CST complex subunit JBrowse link 19 47,501,031 47,545,845 RGD:2290270
G Ten1 TEN1 telomerase capping complex subunit JBrowse link 11 116,198,855 116,215,318 RGD:2290270
G Tent4b terminal nucleotidyltransferase 4B JBrowse link 8 88,199,213 88,263,314 RGD:2290270
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Tinf2 Terf1 (TRF1)-interacting nuclear factor 2 JBrowse link 14 55,676,208 55,682,159 RGD:2290270
negative regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 JBrowse link 16 13,109,366 13,152,009 RGD:2290270
G Mcrs1 microspherule protein 1 JBrowse link 15 99,242,817 99,251,961 RGD:2290270
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:2290270
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) JBrowse link 7 126,688,927 126,695,783 RGD:9068941
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) JBrowse link 16 3,979,105 4,003,829 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Tnks tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase JBrowse link 8 34,829,179 34,965,690 RGD:2290270
G Tnks2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 JBrowse link 19 36,834,129 36,893,477 RGD:2290270
negative regulation of telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
positive regulation of shelterin complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
positive regulation of subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sirt6 sirtuin 6 JBrowse link 10 81,621,787 81,627,792 RGD:2290270
positive regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 JBrowse link 7 19,344,067 19,356,524 RGD:2290270
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) JBrowse link 7 126,688,927 126,695,783 RGD:2290270
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) JBrowse link 16 3,979,105 4,003,829 RGD:2290270
positive regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurkb aurora kinase B JBrowse link 11 69,045,624 69,051,664 RGD:2290270
G Hnrnpd heterogeneous nuclear ribonucleoprotein D JBrowse link 5 99,955,935 99,979,130 RGD:2290270
G Map2k7 mitogen-activated protein kinase kinase 7 JBrowse link 8 4,238,740 4,247,897 RGD:2290270
G Map3k4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 17 12,227,621 12,318,796 RGD:2290270
G Mapk1 mitogen-activated protein kinase 1 JBrowse link 16 16,983,382 17,047,453 RGD:2290270
G Mapk15 mitogen-activated protein kinase 15 JBrowse link 15 75,993,732 75,999,153 RGD:2290270
G Mapk3 mitogen-activated protein kinase 3 JBrowse link 7 126,759,626 126,765,816 RGD:2290270
G Mapkapk5 MAP kinase-activated protein kinase 5 JBrowse link 5 121,525,051 121,545,892 RGD:2290270
G Nabp2 nucleic acid binding protein 2 JBrowse link 10 128,401,394 128,411,548 RGD:2290270
G Nek2 NIMA (never in mitosis gene a)-related expressed kinase 2 JBrowse link 1 191,821,449 191,833,049 RGD:2290270
G Nek7 NIMA (never in mitosis gene a)-related expressed kinase 7 JBrowse link 1 138,483,837 138,619,757 RGD:2290270
G Pkib protein kinase inhibitor beta, cAMP dependent, testis specific JBrowse link 10 57,631,981 57,741,112 RGD:2290270
G Pnkp polynucleotide kinase 3'- phosphatase JBrowse link 7 44,856,479 44,865,337 RGD:2290270
G Prkcq protein kinase C, theta JBrowse link 2 11,171,905 11,301,226 RGD:2290270
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
G Tnks tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase JBrowse link 8 34,829,179 34,965,690 RGD:2290270
G Tnks2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 JBrowse link 19 36,834,129 36,893,477 RGD:2290270
positive regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:2290270
G Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 JBrowse link 3 62,468,015 62,507,034 RGD:2290270
G Gnl3 guanine nucleotide binding protein-like 3 (nucleolar) JBrowse link 14 31,012,433 31,019,131 RGD:2290270
G Mre11a MRE11A homolog A, double strand break repair nuclease JBrowse link 9 14,784,654 14,837,125 RGD:2290270
G Nbn nibrin JBrowse link 4 15,957,587 15,992,589 RGD:2290270
G Pml promyelocytic leukemia JBrowse link 9 58,217,179 58,249,796 RGD:2290270
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 JBrowse link 17 35,916,512 35,932,283 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
G Sirt6 sirtuin 6 JBrowse link 10 81,621,787 81,627,792 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd adrenocortical dysplasia JBrowse link 8 105,698,155 105,701,228 RGD:2290270
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:2290270
G Atr ataxia telangiectasia and Rad3 related JBrowse link 9 95,857,597 95,953,217 RGD:2290270
G Aurkb aurora kinase B JBrowse link 11 69,045,624 69,051,664 RGD:2290270
G Cct2 chaperonin containing Tcp1, subunit 2 (beta) JBrowse link 10 117,050,997 117,063,852 RGD:2290270
G Cct3 chaperonin containing Tcp1, subunit 3 (gamma) JBrowse link 3 88,297,135 88,321,766 RGD:2290270
G Cct4 chaperonin containing Tcp1, subunit 4 (delta) JBrowse link 11 22,990,593 23,003,336 RGD:2290270
G Cct5 chaperonin containing Tcp1, subunit 5 (epsilon) JBrowse link 15 31,590,800 31,601,846 RGD:2290270
G Cct6a chaperonin containing Tcp1, subunit 6a (zeta) JBrowse link 5 129,787,356 129,846,443 RGD:2290270
G Cct7 chaperonin containing Tcp1, subunit 7 (eta) JBrowse link 6 85,451,505 85,468,477 RGD:2290270
G Cct8 chaperonin containing Tcp1, subunit 8 (theta) JBrowse link 16 87,483,325 87,495,869 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Dkc1 dyskeratosis congenita 1, dyskerin JBrowse link X 75,095,854 75,109,776 RGD:2290270
G Fbxo4 F-box protein 4 JBrowse link 15 3,963,564 3,979,573 RGD:2290270
G Hmbox1 homeobox containing 1 JBrowse link 14 64,811,600 64,949,899 RGD:2290270
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 15 103,239,943 103,246,698 RGD:9068941
G Map2k7 mitogen-activated protein kinase kinase 7 JBrowse link 8 4,238,740 4,247,897 RGD:2290270
G Map3k4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 17 12,227,621 12,318,796 RGD:2290270
G Mapk1 mitogen-activated protein kinase 1 JBrowse link 16 16,983,382 17,047,453 RGD:2290270
G Mapk15 mitogen-activated protein kinase 15 JBrowse link 15 75,993,732 75,999,153 RGD:2290270
G Mapk3 mitogen-activated protein kinase 3 JBrowse link 7 126,759,626 126,765,816 RGD:2290270
G Mapkapk5 MAP kinase-activated protein kinase 5 JBrowse link 5 121,525,051 121,545,892 RGD:2290270
G Nek2 NIMA (never in mitosis gene a)-related expressed kinase 2 JBrowse link 1 191,821,449 191,833,049 RGD:2290270
G Nek7 NIMA (never in mitosis gene a)-related expressed kinase 7 JBrowse link 1 138,483,837 138,619,757 RGD:2290270
G Parn poly(A)-specific ribonuclease (deadenylation nuclease) JBrowse link 16 13,537,964 13,668,198 RGD:2290270
G Pkib protein kinase inhibitor beta, cAMP dependent, testis specific JBrowse link 10 57,631,981 57,741,112 RGD:2290270
G Pnkp polynucleotide kinase 3'- phosphatase JBrowse link 7 44,856,479 44,865,337 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Prkcq protein kinase C, theta JBrowse link 2 11,171,905 11,301,226 RGD:2290270
G Tcp1 t-complex protein 1 JBrowse link 17 12,916,329 12,925,067 RGD:2290270
G Terc telomerase RNA component JBrowse link 3 96,414,437 96,414,833 RGD:2290270
G Tnks tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase JBrowse link 8 34,829,179 34,965,690 RGD:2290270
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 JBrowse link 1 72,307,417 72,394,953 RGD:2290270
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:2290270
G Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 JBrowse link 3 62,468,015 62,507,034 RGD:2290270
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 6 51,460,434 51,470,048 RGD:2290270
G Naf1 nuclear assembly factor 1 ribonucleoprotein JBrowse link 8 66,859,943 66,890,564 RGD:2290270
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
positive regulation of telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd adrenocortical dysplasia JBrowse link 8 105,698,155 105,701,228 RGD:2290270
G Dclre1a DNA cross-link repair 1A JBrowse link 19 56,529,161 56,548,284 RGD:2290270
G Dclre1b DNA cross-link repair 1B JBrowse link 3 103,800,605 103,809,387 RGD:2290270
G Dclre1c DNA cross-link repair 1C JBrowse link 2 3,424,061 3,474,211 RGD:2290270
G Pot1b protection of telomeres 1B JBrowse link 17 55,651,190 55,712,647 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Terf2ip telomeric repeat binding factor 2, interacting protein JBrowse link 8 112,011,359 112,020,528 RGD:2290270
RGD:9068941
regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdac8 histone deacetylase 8 JBrowse link X 102,284,638 102,505,381 RGD:2290270
G Hnrnpd heterogeneous nuclear ribonucleoprotein D JBrowse link 5 99,955,935 99,979,130 RGD:2290270
G Lmna lamin A JBrowse link 3 88,481,148 88,509,932 RGD:2290270
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:2290270
G Pif1 PIF1 5'-to-3' DNA helicase JBrowse link 9 65,587,150 65,595,967 RGD:2290270
G Smg1 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) JBrowse link 7 118,131,308 118,244,437 RGD:2290270
G Smg5 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) JBrowse link 3 88,336,259 88,362,338 RGD:2290270
G Smg6 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) JBrowse link 11 74,925,854 75,164,448 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Terf2ip telomeric repeat binding factor 2, interacting protein JBrowse link 8 112,011,359 112,020,528 RGD:2290270
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) JBrowse link 8 70,331,493 70,353,423 RGD:2290270
G Ylpm1 YLP motif containing 1 JBrowse link 12 84,996,203 85,088,068 RGD:2290270
regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Pot1b protection of telomeres 1B JBrowse link 17 55,651,190 55,712,647 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tinf2 Terf1 (TRF1)-interacting nuclear factor 2 JBrowse link 14 55,676,208 55,682,159 RGD:2290270
subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G H3f3a H3.3 histone A JBrowse link 1 180,802,560 180,813,605 RGD:2290270
G H3f3b H3.3 histone B JBrowse link 11 116,021,961 116,026,039 RGD:2290270
t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 JBrowse link 7 19,344,067 19,356,524 RGD:2290270
G Nbn nibrin JBrowse link 4 15,957,587 15,992,589 RGD:2290270
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) JBrowse link 7 126,688,927 126,695,783 RGD:2290270
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) JBrowse link 16 3,979,105 4,003,829 RGD:2290270
G Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 JBrowse link 12 111,803,192 111,813,893 RGD:2290270
telomere assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd adrenocortical dysplasia JBrowse link 8 105,698,155 105,701,228 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Tinf2 Terf1 (TRF1)-interacting nuclear factor 2 JBrowse link 14 55,676,208 55,682,159 RGD:2290270
telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd adrenocortical dysplasia JBrowse link 8 105,698,155 105,701,228 RGD:2290270
G Dclre1b DNA cross-link repair 1B JBrowse link 3 103,800,605 103,809,387 RGD:2290270
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 6 51,460,434 51,470,048 RGD:2290270
G Nbn nibrin JBrowse link 4 15,957,587 15,992,589 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Pot1b protection of telomeres 1B JBrowse link 17 55,651,190 55,712,647 RGD:2290270
G Prkdc protein kinase, DNA activated, catalytic polypeptide JBrowse link 16 15,637,444 15,842,239 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Stn1 STN1, CST complex subunit JBrowse link 19 47,501,031 47,545,845 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Tinf2 Terf1 (TRF1)-interacting nuclear factor 2 JBrowse link 14 55,676,208 55,682,159 RGD:2290270
telomere formation via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wrap53 WD repeat containing, antisense to Trp53 JBrowse link 11 69,561,754 69,580,250 RGD:2290270
telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd adrenocortical dysplasia JBrowse link 8 105,698,155 105,701,228 RGD:2290270
G Apex1 apurinic/apyrimidinic endonuclease 1 JBrowse link 14 50,924,949 50,927,188 RGD:2290270
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:2290270
G Atr ataxia telangiectasia and Rad3 related JBrowse link 9 95,857,597 95,953,217 RGD:2290270
G Blm Bloom syndrome, RecQ like helicase JBrowse link 7 80,454,993 80,535,148 RGD:2290270
G Ccne1 cyclin E1 JBrowse link 7 38,097,984 38,107,490 RGD:2290270
G Ccne2 cyclin E2 JBrowse link 4 11,190,433 11,204,779 RGD:2290270
G Ctc1 CTS telomere maintenance complex component 1 JBrowse link 11 69,015,188 69,036,473 RGD:2290270
G Dclre1b DNA cross-link repair 1B JBrowse link 3 103,800,605 103,809,387 RGD:2290270
G Dclre1c DNA cross-link repair 1C JBrowse link 2 3,424,061 3,474,211 RGD:2290270
G Dna2 DNA replication helicase/nuclease 2 JBrowse link 10 62,946,983 62,974,188 RGD:2290270
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 JBrowse link 16 13,109,366 13,152,009 RGD:2290270
G Fbxo4 F-box protein 4 JBrowse link 15 3,963,564 3,979,573 RGD:2290270
G Hspa1a heat shock protein 1A JBrowse link 17 34,969,359 34,972,156 RGD:2290270
G Hus1 HUS1 checkpoint clamp component JBrowse link 11 8,993,137 9,011,236 RGD:2290270
G Hus1b HUS1 checkpoint clamp component B JBrowse link 13 30,946,576 30,947,761 RGD:2290270
G LTO1 ABCE maturation factor JBrowse link 7 144,915,100 144,930,748 RGD:2290270
G Mre11a MRE11A homolog A, double strand break repair nuclease JBrowse link 9 14,784,654 14,837,125 RGD:2290270
G Nbn nibrin JBrowse link 4 15,957,587 15,992,589 RGD:2290270
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:2290270
G Parp3 poly (ADP-ribose) polymerase family, member 3 JBrowse link 9 106,470,322 106,476,949 RGD:2290270
G Pif1 PIF1 5'-to-3' DNA helicase JBrowse link 9 65,587,150 65,595,967 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Prkdc protein kinase, DNA activated, catalytic polypeptide JBrowse link 16 15,637,444 15,842,239 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Rad51d RAD51 paralog D JBrowse link 11 82,871,960 82,890,624 RGD:2290270
G Recql4 RecQ protein-like 4 JBrowse link 15 76,703,553 76,710,616 RGD:2290270
G Rif1 replication timing regulatory factor 1 JBrowse link 2 52,072,815 52,126,769 RGD:2290270
G Rpa1 replication protein A1 JBrowse link 11 75,300,259 75,348,454 RGD:2290270
G Rpa2 replication protein A2 JBrowse link 4 132,768,360 132,778,746 RGD:2290270
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
G Sp100 nuclear antigen Sp100 JBrowse link 1 85,649,948 85,709,998 RGD:9068941
G Stn1 STN1, CST complex subunit JBrowse link 19 47,501,031 47,545,845 RGD:2290270
G Terc telomerase RNA component JBrowse link 3 96,414,437 96,414,833 RGD:2290270
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Terf2ip telomeric repeat binding factor 2, interacting protein JBrowse link 8 112,011,359 112,020,528 RGD:2290270
G Tnks2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 JBrowse link 19 36,834,129 36,893,477 RGD:2290270
G Wrn Werner syndrome RecQ like helicase JBrowse link 8 33,234,372 33,385,543 RGD:2290270
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 JBrowse link 1 72,307,417 72,394,953 RGD:2290270
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 JBrowse link 15 81,987,833 82,040,085 RGD:2290270
G Xrn1 5'-3' exoribonuclease 1 JBrowse link 9 95,954,750 96,057,806 RGD:2290270
G Zfp365 zinc finger protein 365 JBrowse link 10 67,886,105 67,912,662 RGD:2290270
telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pot1b protection of telomeres 1B JBrowse link 17 55,651,190 55,712,647 RGD:2290270
G Rif1 replication timing regulatory factor 1 JBrowse link 2 52,072,815 52,126,769 RGD:2290270
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
telomere maintenance via base-excision repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apex1 apurinic/apyrimidinic endonuclease 1 JBrowse link 14 50,924,949 50,927,188 RGD:2290270
telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 breast cancer 2, early onset JBrowse link 5 150,522,297 150,570,147 RGD:2290270
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase JBrowse link 15 59,374,198 59,601,689 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Rad51 RAD51 recombinase JBrowse link 2 119,112,814 119,136,073 RGD:2290270
G Rad51c RAD51 paralog C JBrowse link 11 87,376,645 87,404,954 RGD:2290270
G Rad51d RAD51 paralog D JBrowse link 11 82,871,960 82,890,624 RGD:2290270
G Smc5 structural maintenance of chromosomes 5 JBrowse link 19 23,206,441 23,273,922 RGD:2290270
G Smc6 structural maintenance of chromosomes 6 JBrowse link 12 11,265,886 11,319,785 RGD:2290270
G Tep1 telomerase associated protein 1 JBrowse link 14 50,824,059 50,870,579 RGD:2290270
G Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 JBrowse link 12 111,803,192 111,813,893 RGD:2290270
telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) JBrowse link 8 70,331,493 70,353,423 RGD:2290270
telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkc1 dyskeratosis congenita 1, dyskerin JBrowse link X 75,095,854 75,109,776 RGD:2290270
G Gar1 GAR1 ribonucleoprotein JBrowse link 3 129,824,912 129,831,407 RGD:9068941
G Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 JBrowse link 12 110,691,036 110,696,395 RGD:2290270
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 JBrowse link 17 45,567,778 45,573,261 RGD:2290270
G Nhp2 NHP2 ribonucleoprotein JBrowse link 11 51,619,773 51,623,718 RGD:2290270
G Nop10 NOP10 ribonucleoprotein JBrowse link 2 112,261,926 112,262,898 RGD:2290270
G Parp4 poly (ADP-ribose) polymerase family, member 4 JBrowse link 14 56,575,619 56,659,798 RGD:2290270
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 JBrowse link 14 63,860,277 63,919,862 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Ptges3 prostaglandin E synthase 3 JBrowse link 10 128,058,982 128,077,254 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Rpa1 replication protein A1 JBrowse link 11 75,300,259 75,348,454 RGD:2290270
G Telo2 telomere maintenance 2 JBrowse link 17 25,099,569 25,115,974 RGD:2290270
G Tep1 telomerase associated protein 1 JBrowse link 14 50,824,059 50,870,579 RGD:2290270
G Terc telomerase RNA component JBrowse link 3 96,414,437 96,414,833 RGD:2290270
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
G Tert telomerase reverse transcriptase JBrowse link 13 73,626,911 73,649,843 RGD:2290270
G Wrap53 WD repeat containing, antisense to Trp53 JBrowse link 11 69,561,754 69,580,250 RGD:2290270
telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctc1 CTS telomere maintenance complex component 1 JBrowse link 11 69,015,188 69,036,473 RGD:2290270
G Dclre1b DNA cross-link repair 1B JBrowse link 3 103,800,605 103,809,387 RGD:2290270
G Rad51 RAD51 recombinase JBrowse link 2 119,112,814 119,136,073 RGD:2290270
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) JBrowse link 7 126,688,927 126,695,783 RGD:9068941
G Stn1 STN1, CST complex subunit JBrowse link 19 47,501,031 47,545,845 RGD:2290270
G Terf2ip telomeric repeat binding factor 2, interacting protein JBrowse link 8 112,011,359 112,020,528 RGD:2290270
G Zbtb48 zinc finger and BTB domain containing 48 JBrowse link 4 152,019,773 152,027,675 RGD:2290270
G Zscan4c zinc finger and SCAN domain containing 4C JBrowse link 7 11,005,745 11,010,547 RGD:2290270
telomere maintenance via telomere trimming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nbn nibrin JBrowse link 4 15,957,587 15,992,589 RGD:2290270
G Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 JBrowse link 12 111,803,192 111,813,893 RGD:2290270
telomeric 3' overhang formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dclre1b DNA cross-link repair 1B JBrowse link 3 103,800,605 103,809,387 RGD:2290270
G Mre11a MRE11A homolog A, double strand break repair nuclease JBrowse link 9 14,784,654 14,837,125 RGD:2290270
G Nbn nibrin JBrowse link 4 15,957,587 15,992,589 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Blm Bloom syndrome, RecQ like helicase JBrowse link 7 80,454,993 80,535,148 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Recql4 RecQ protein-like 4 JBrowse link 15 76,703,553 76,710,616 RGD:2290270
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) JBrowse link 7 126,688,927 126,695,783 RGD:9068941
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) JBrowse link 16 3,979,105 4,003,829 RGD:2290270
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Wrn Werner syndrome RecQ like helicase JBrowse link 8 33,234,372 33,385,543 RGD:2290270
telomeric DNA-containing double minutes formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 JBrowse link 7 19,344,067 19,356,524 RGD:2290270
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 JBrowse link 16 13,109,366 13,152,009 RGD:2290270
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 JBrowse link 7 24,546,699 24,573,438 RGD:2290270
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 JBrowse link 13 89,848,914 90,089,608 RGD:2290270
telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 2 181,319,711 181,356,616 RGD:2290270
telomeric loop formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dclre1b DNA cross-link repair 1B JBrowse link 3 103,800,605 103,809,387 RGD:2290270
G Pot1a protection of telomeres 1A JBrowse link 6 25,743,940 25,809,277 RGD:2290270
G Pot1b protection of telomeres 1B JBrowse link 17 55,651,190 55,712,647 RGD:2290270
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
G Terf2 telomeric repeat binding factor 2 JBrowse link 8 107,069,400 107,096,548 RGD:2290270
G Terf2ip telomeric repeat binding factor 2, interacting protein JBrowse link 8 112,011,359 112,020,528 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23155
    cellular process 17050
      cellular component organization or biogenesis 6347
        cellular component organization 6159
          organelle organization 3797
            chromosome organization 1168
              telomere organization 129
                shelterin complex assembly + 1
                subtelomeric heterochromatin assembly + 3
                subtelomeric heterochromatin organization + 3
                telomere assembly + 7
                telomere maintenance + 127
                telomere-telomerase complex assembly 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.