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ONTOLOGY REPORT - ANNOTATIONS


Term:telomere organization
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Accession:GO:0032200 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.
Synonyms:exact_synonym: chromosome organization, telomeric;   organization of chromosome, telomeric region;   telomere organisation
 related_synonym: telomere organization and biogenesis


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telomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD51 RAD51 recombinase JBrowse link 1 130,592,414 130,640,326 RGD:9068941
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 14 71,550,405 71,607,067 RGD:14298760
G PCNA proliferating cell nuclear antigen JBrowse link 17 14,137,746 14,142,584 RGD:14298760
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:14298760
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 6 51,783,537 51,808,898 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 3 29,266,234 29,306,109 RGD:14298760
G XRCC1 X-ray repair cross complementing 1 JBrowse link 6 50,403,691 50,425,730 RGD:14298760
G XRCC4 X-ray repair cross complementing 4 JBrowse link 2 91,358,348 91,643,697 RGD:9068941
negative regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
G XRCC5 X-ray repair cross complementing 5 JBrowse link 15 118,354,943 118,451,974 RGD:9068941
negative regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 9 36,620,656 36,759,555 RGD:14298760
G NBN nibrin JBrowse link 4 46,787,664 46,854,331 RGD:14298760
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:9068941
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 12 48,172,705 48,386,996 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
negative regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 6 51,783,537 51,808,898 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 3 29,266,234 29,306,109 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 6 12,047,409 12,057,451 RGD:14298760
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 7 75,056,790 75,067,895 RGD:9068941
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:14298760
negative regulation of telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 6 28,277,649 28,280,409 RGD:14298760
G CTC1 CST telomere replication complex component 1 JBrowse link 12 53,427,807 53,454,149 RGD:9068941
G DCP2 decapping mRNA 2 JBrowse link 2 116,736,800 116,804,693 RGD:14298760
G EXOSC10 exosome component 10 JBrowse link 6 71,258,988 71,282,802 RGD:14298760
G GNL3L G protein nucleolar 3 like JBrowse link X 47,256,467 47,284,520 RGD:14298760
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 5 19,485,033 19,491,418 RGD:14298760
G HNRNPC heterogeneous nuclear ribonucleoprotein C JBrowse link 7 77,921,098 77,978,550 RGD:9068941
G HNRNPU heterogeneous nuclear ribonucleoprotein U JBrowse link 10 17,475,266 17,497,060 RGD:14298760
G NAT10 N-acetyltransferase 10 JBrowse link 2 26,786,172 26,827,060 RGD:14298760
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 1 107,218,580 107,227,171 RGD:14298760
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 JBrowse link 14 13,965,733 14,041,841 RGD:14298760
G PML PML nuclear body scaffold JBrowse link 7 59,405,044 59,450,155 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 17 40,470,970 40,524,862 RGD:14298760
G STN1 STN1 subunit of CST complex JBrowse link 14 114,808,217 114,851,130 RGD:14298760
G TEN1 TEN1 subunit of CST complex JBrowse link 12 5,430,940 5,451,140 RGD:14298760
G TENT4B terminal nucleotidyltransferase 4B JBrowse link 6 34,603,157 34,669,779 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 7 75,056,790 75,067,895 RGD:14298760
negative regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 3 29,266,234 29,306,109 RGD:14298760
G MCRS1 microspherule protein 1 JBrowse link 5 15,517,028 15,526,567 RGD:9068941
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 10 14,203,157 14,241,164 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 3 18,346,501 18,349,509 RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 3 38,646,904 38,670,173 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:9068941
G TNKS tankyrase JBrowse link 15 55,513,874 55,681,544 RGD:14298760
G TNKS2 tankyrase 2 JBrowse link 14 103,396,424 103,461,830 RGD:14298760
negative regulation of telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
positive regulation of shelterin complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:14298760
positive regulation of subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIRT6 sirtuin 6 JBrowse link 2 74,568,539 74,577,774 RGD:14298760
positive regulation of t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 6 51,783,537 51,808,898 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 3 18,346,501 18,349,509 RGD:14298760
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 3 38,646,904 38,670,173 RGD:9068941
positive regulation of telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD39 ankyrin repeat domain 39 JBrowse link 3 56,762,366 56,774,253 RGD:14298760
G AURKB aurora kinase B JBrowse link 12 53,410,833 53,426,165 RGD:9068941
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 8 135,844,492 135,862,633 RGD:14298760
G MAP2K7 mitogen-activated protein kinase kinase 7 JBrowse link 2 71,299,010 71,308,432 RGD:14298760
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 1 6,891,255 7,049,784 RGD:14298760
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 14 50,083,079 50,165,528 RGD:9068941
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 4 909,266 915,537 RGD:9068941
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 3 18,291,444 18,299,410 RGD:14298760
G MAPKAPK5 MAPK activated protein kinase 5 JBrowse link 14 39,852,537 39,885,898 RGD:9068941
G NABP2 nucleic acid binding protein 2 JBrowse link 5 21,624,654 21,631,716 RGD:14298760
G NEK2 NIMA related kinase 2 JBrowse link 9 131,547,044 131,560,527 RGD:9068941
G NEK7 NIMA related kinase 7 JBrowse link 10 20,966,660 21,124,283 RGD:14298760
G PKIB cAMP-dependent protein kinase inhibitor beta JBrowse link 1 39,913,753 40,022,971 RGD:14298760
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 6 54,870,359 54,880,814 RGD:9068941
G PRKCQ protein kinase C theta JBrowse link 10 64,442,588 64,596,528 RGD:14298760
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:9068941
G TNKS tankyrase JBrowse link 15 55,513,874 55,681,544 RGD:14298760
G TNKS2 tankyrase 2 JBrowse link 14 103,396,424 103,461,830 RGD:14298760
positive regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATRX ATRX chromatin remodeler JBrowse link X 61,584,028 61,872,341 RGD:14298760
G DHX36 DEAH-box helicase 36 JBrowse link 13 94,298,790 94,350,333 RGD:9068941
G GNL3 G protein nucleolar 3 JBrowse link 13 34,820,243 34,828,523 RGD:14298760
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 9 26,572,352 26,634,596 RGD:14298760
G NBN nibrin JBrowse link 4 46,787,664 46,854,331 RGD:14298760
G PML PML nuclear body scaffold JBrowse link 7 59,405,044 59,450,155 RGD:14298760
G PPP1R10 protein phosphatase 1 regulatory subunit 10 JBrowse link 7 23,148,834 23,166,933 RGD:14298760
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:9068941
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:9068941
G SIRT6 sirtuin 6 JBrowse link 2 74,568,539 74,577,774 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:9068941
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 6 28,277,649 28,280,409 RGD:9068941
G ATM ATM serine/threonine kinase JBrowse link 9 36,620,656 36,759,555 RGD:14298760
G ATR ATR serine/threonine kinase JBrowse link 13 83,175,515 83,289,986 RGD:9068941
G AURKB aurora kinase B JBrowse link 12 53,410,833 53,426,165 RGD:9068941
G CCT2 chaperonin containing TCP1 subunit 2 JBrowse link 5 33,858,514 33,873,596 RGD:9068941
G CCT3 chaperonin containing TCP1 subunit 3 JBrowse link 4 93,733,967 93,753,340 RGD:14298760
G CCT4 chaperonin containing TCP1 subunit 4 JBrowse link 3 79,924,338 79,941,926 RGD:14298760
G CCT5 chaperonin containing TCP1 subunit 5 JBrowse link 16 72,211,452 72,223,202 RGD:14298760
G CCT6A chaperonin containing TCP1 subunit 6A JBrowse link 3 16,843,801 16,858,819 RGD:9068941
G CCT7 chaperonin containing TCP1 subunit 7 JBrowse link 3 69,527,238 69,540,489 RGD:9068941
G CCT8 chaperonin containing TCP1 subunit 8 JBrowse link 13 192,407,831 192,423,466 RGD:14298760
G CTNNB1 catenin beta 1 JBrowse link 13 25,163,550 25,208,314 RGD:9068941
G DKC1 dyskerin pseudouridine synthase 1 JBrowse link X 125,218,928 125,228,881 RGD:14298760
G FBXO4 F-box protein 4 JBrowse link 16 26,707,470 26,751,134 RGD:14298760
G HMBOX1 homeobox containing 1 JBrowse link 14 12,692,607 12,895,078 RGD:14298760
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 5 19,485,033 19,491,418 RGD:14298760
G MAP2K7 mitogen-activated protein kinase kinase 7 JBrowse link 2 71,299,010 71,308,432 RGD:14298760
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 JBrowse link 1 6,891,255 7,049,784 RGD:14298760
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 14 50,083,079 50,165,528 RGD:9068941
G MAPK15 mitogen-activated protein kinase 15 JBrowse link 4 909,266 915,537 RGD:9068941
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 3 18,291,444 18,299,410 RGD:14298760
G MAPKAPK5 MAPK activated protein kinase 5 JBrowse link 14 39,852,537 39,885,898 RGD:9068941
G NEK2 NIMA related kinase 2 JBrowse link 9 131,547,044 131,560,527 RGD:9068941
G NEK7 NIMA related kinase 7 JBrowse link 10 20,966,660 21,124,283 RGD:14298760
G PARN poly(A)-specific ribonuclease JBrowse link 3 28,616,808 28,802,506 RGD:9068941
G PKIB cAMP-dependent protein kinase inhibitor beta JBrowse link 1 39,913,753 40,022,971 RGD:14298760
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 6 54,870,359 54,880,814 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G PRKCQ protein kinase C theta JBrowse link 10 64,442,588 64,596,528 RGD:14298760
G TCP1 t-complex 1 JBrowse link 1 7,590,140 7,600,709 RGD:14298760
G TNKS tankyrase JBrowse link 15 55,513,874 55,681,544 RGD:14298760
G XRCC5 X-ray repair cross complementing 5 JBrowse link 15 118,354,943 118,451,974 RGD:9068941
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 9 36,620,656 36,759,555 RGD:9068941
G DHX36 DEAH-box helicase 36 JBrowse link 13 94,298,790 94,350,333 RGD:14298760
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 18 46,205,164 46,215,861 RGD:9068941
G NAF1 nuclear assembly factor 1 ribonucleoprotein JBrowse link 8 51,972,288 52,012,818 RGD:14298760
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:9068941
positive regulation of telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:14298760
protection from non-homologous end joining at telomere term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 6 28,277,649 28,280,409 RGD:14298760
G DCLRE1A DNA cross-link repair 1A JBrowse link 14 124,144,272 124,162,379 RGD:14298760
G DCLRE1B DNA cross-link repair 1B JBrowse link 4 106,646,591 106,656,490 RGD:14298760
G DCLRE1C DNA cross-link repair 1C JBrowse link 10 46,820,016 46,863,848 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
G TERF2IP TERF2 interacting protein JBrowse link 6 12,047,409 12,057,451 RGD:14298760
RGD:9068941
regulation of telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HDAC8 histone deacetylase 8 JBrowse link X 58,210,182 58,450,681 RGD:9068941
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 8 135,844,492 135,862,633 RGD:9068941
G LMNA lamin A/C JBrowse link 4 93,899,019 93,927,255 RGD:9068941
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 4 12,455,141 12,460,360 RGD:14298760
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 1 107,218,580 107,227,171 RGD:9068941
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase JBrowse link 3 26,653,819 26,758,268 RGD:14298760
G SMG5 SMG5 nonsense mediated mRNA decay factor JBrowse link 4 93,770,329 93,801,808 RGD:9068941
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 12 48,172,705 48,386,996 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 6 12,047,409 12,057,451 RGD:9068941
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 2 58,975,013 59,013,546 RGD:14298760
G YLPM1 YLP motif containing 1 JBrowse link 7 97,976,129 98,042,234 RGD:14298760
regulation of telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 9 36,620,656 36,759,555 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G SMG5 SMG5 nonsense mediated mRNA decay factor JBrowse link 4 93,770,329 93,801,808 RGD:14298760
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 12 48,172,705 48,386,996 RGD:14298760
G SMG7 SMG7 nonsense mediated mRNA decay factor JBrowse link 9 124,696,432 124,775,739 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 7 75,056,790 75,067,895 RGD:14298760
subtelomeric heterochromatin assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G H3-3A H3 histone, family 3A JBrowse link 10 13,939,938 13,947,976 RGD:14298760
G LOC100521680 histone H3.3 JBrowse link 12 5,632,326 5,634,977 RGD:14298760
t-circle formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 6 51,783,537 51,808,898 RGD:9068941
G NBN nibrin JBrowse link 4 46,787,664 46,854,331 RGD:14298760
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 3 18,346,501 18,349,509 RGD:14298760
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 3 38,646,904 38,670,173 RGD:14298760
G XRCC3 X-ray repair cross complementing 3 RGD:14298760
telomere assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 6 28,277,649 28,280,409 RGD:9068941
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 7 75,056,790 75,067,895 RGD:14298760
telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 6 28,277,649 28,280,409 RGD:14298760
G DCLRE1B DNA cross-link repair 1B JBrowse link 4 106,646,591 106,656,490 RGD:9068941
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 18 46,205,164 46,215,861 RGD:9068941
G NBN nibrin JBrowse link 4 46,787,664 46,854,331 RGD:14298760
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 4 79,687,375 79,850,146 RGD:14298760
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:14298760
G STN1 STN1 subunit of CST complex JBrowse link 14 114,808,217 114,851,130 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:9068941
G TINF2 TERF1 interacting nuclear factor 2 JBrowse link 7 75,056,790 75,067,895 RGD:14298760
telomere formation via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G WRAP53 WD repeat containing antisense to TP53 JBrowse link 12 52,954,674 52,968,371 RGD:14298760
telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACD ACD shelterin complex subunit and telomerase recruitment factor JBrowse link 6 28,277,649 28,280,409 RGD:9068941
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 7 78,451,845 78,454,938 RGD:9068941
G ATM ATM serine/threonine kinase JBrowse link 9 36,620,656 36,759,555 RGD:14298760
G ATR ATR serine/threonine kinase JBrowse link 13 83,175,515 83,289,986 RGD:14298760
G BLM BLM RecQ like helicase JBrowse link 7 53,317,515 53,412,649 RGD:14298760
G CCNE1 cyclin E1 JBrowse link 6 39,919,541 39,933,224 RGD:14298760
G CCNE2 cyclin E2 JBrowse link 4 41,802,090 41,821,870 RGD:14298760
G CTC1 CST telomere replication complex component 1 JBrowse link 12 53,427,807 53,454,149 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 4 106,646,591 106,656,490 RGD:9068941
G DCLRE1C DNA cross-link repair 1C JBrowse link 10 46,820,016 46,863,848 RGD:14298760
G DNA2 DNA replication helicase/nuclease 2 JBrowse link 14 71,550,405 71,607,067 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 3 29,266,234 29,306,109 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 16 26,707,470 26,751,134 RGD:9068941
G HUS1 HUS1 checkpoint clamp component JBrowse link 18 48,522,914 48,539,267 RGD:14298760
G LOC100517129 nuclear body protein SP140-like protein JBrowse link 15 131,299,923 131,381,253 RGD:9068941
G LTO1 LTO1 maturation factor of ABCE1 JBrowse link 2 3,607,605 3,615,621 RGD:14298760
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 9 26,572,352 26,634,596 RGD:14298760
G NBN nibrin JBrowse link 4 46,787,664 46,854,331 RGD:14298760
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 10 14,203,157 14,241,164 RGD:9068941
G PARP3 poly(ADP-ribose) polymerase family member 3 JBrowse link 13 34,075,807 34,084,384 RGD:14298760
G PIF1 PIF1 5'-to-3' DNA helicase JBrowse link 1 107,218,580 107,227,171 RGD:14298760
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G PRKDC protein kinase, DNA-activated, catalytic subunit JBrowse link 4 79,687,375 79,850,146 RGD:14298760
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:14298760
G RAD51D RAD51 paralog D JBrowse link 12 40,054,175 40,072,831 RGD:14298760
G RECQL4 RecQ like helicase 4 JBrowse link 4 287,206 293,629 RGD:9068941
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase JBrowse link 12 40,075,259 40,151,034 RGD:14298760
G RIF1 replication timing regulatory factor 1 JBrowse link 15 769,518 832,036 RGD:9068941
G RPA1 replication protein A1 JBrowse link 12 48,009,652 48,048,744 RGD:14298760
G RPA2 replication protein A2 JBrowse link 6 85,032,604 85,045,899 RGD:14298760
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:14298760
G STN1 STN1 subunit of CST complex JBrowse link 14 114,808,217 114,851,130 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:9068941
G TERF2IP TERF2 interacting protein JBrowse link 6 12,047,409 12,057,451 RGD:14298760
G TMEM169 transmembrane protein 169 JBrowse link 15 118,335,915 118,352,713 RGD:14298760
G TNKS2 tankyrase 2 JBrowse link 14 103,396,424 103,461,830 RGD:9068941
G WRN WRN RecQ like helicase JBrowse link 15 53,966,968 54,094,855 RGD:14298760
G XRCC5 X-ray repair cross complementing 5 JBrowse link 15 118,354,943 118,451,974 RGD:14298760
G XRCC6 X-ray repair cross complementing 6 JBrowse link 5 6,903,496 6,929,162 RGD:14298760
G ZNF365 zinc finger protein 365 JBrowse link 14 65,861,398 65,888,341 RGD:14298760
telomere maintenance in response to DNA damage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RIF1 replication timing regulatory factor 1 JBrowse link 15 769,518 832,036 RGD:14298760
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:14298760
telomere maintenance via base-excision repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 7 78,451,845 78,454,938 RGD:14298760
telomere maintenance via recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA2 BRCA2 DNA repair associated JBrowse link 11 8,805,950 8,858,128 RGD:9068941
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase JBrowse link 4 14,359,323 14,598,192 RGD:14298760
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:14298760
G RAD51 RAD51 recombinase JBrowse link 1 130,592,414 130,640,326 RGD:14298760
G RAD51C RAD51 paralog C JBrowse link 12 34,975,949 35,018,112 RGD:14298760
G SMC5 structural maintenance of chromosomes 5 JBrowse link 1 223,560,271 223,653,370 RGD:9068941
G SMC6 structural maintenance of chromosomes 6 JBrowse link 3 120,097,361 120,170,974 RGD:14298760
G TEP1 telomerase associated protein 1 JBrowse link 7 78,488,248 78,530,185 RGD:14298760
G XRCC3 X-ray repair cross complementing 3 RGD:14298760
telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 2 58,975,013 59,013,546 RGD:14298760
telomere maintenance via telomerase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DKC1 dyskerin pseudouridine synthase 1 JBrowse link X 125,218,928 125,228,881 RGD:14298760
G GAR1 GAR1 ribonucleoprotein JBrowse link 8 112,401,114 112,414,277 RGD:14298760
G HSP90AA1 heat shock protein 90 alpha family class A member 1 RGD:14298760
G HSP90AB1 heat shock protein 90 alpha family class B member 1 JBrowse link 7 39,237,299 39,250,479 RGD:14298760
G NHP2 NHP2 ribonucleoprotein JBrowse link 2 80,223,439 80,227,614 RGD:9068941
G NOP10 NOP10 ribonucleoprotein JBrowse link 7 80,161,024 80,162,299 RGD:14298760
G PARP4 poly(ADP-ribose) polymerase family member 4 JBrowse link 11 359,503 432,224 RGD:9068941
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 JBrowse link 14 13,965,733 14,041,841 RGD:14298760
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G PTGES3 prostaglandin E synthase 3 JBrowse link 5 22,000,335 22,022,830 RGD:14298760
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:14298760
G SMG5 SMG5 nonsense mediated mRNA decay factor JBrowse link 4 93,770,329 93,801,808 RGD:14298760
G SMG6 SMG6 nonsense mediated mRNA decay factor JBrowse link 12 48,172,705 48,386,996 RGD:14298760
G SMG7 SMG7 nonsense mediated mRNA decay factor JBrowse link 9 124,696,432 124,775,739 RGD:14298760
G TELO2 telomere maintenance 2 JBrowse link 3 40,372,215 40,386,777 RGD:14298760
G TEP1 telomerase associated protein 1 JBrowse link 7 78,488,248 78,530,185 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:14298760
G TERT telomerase reverse transcriptase JBrowse link 16 79,258,591 79,276,421 RGD:14298760
G WRAP53 WD repeat containing antisense to TP53 JBrowse link 12 52,954,674 52,968,371 RGD:14298760
telomere maintenance via telomere lengthening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTC1 CST telomere replication complex component 1 JBrowse link 12 53,427,807 53,454,149 RGD:9068941
G DCLRE1B DNA cross-link repair 1B JBrowse link 4 106,646,591 106,656,490 RGD:14298760
G RAD51 RAD51 recombinase JBrowse link 1 130,592,414 130,640,326 RGD:14298760
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 3 18,346,501 18,349,509 RGD:9068941
G STN1 STN1 subunit of CST complex JBrowse link 14 114,808,217 114,851,130 RGD:14298760
G TERF2IP TERF2 interacting protein JBrowse link 6 12,047,409 12,057,451 RGD:14298760
G ZBTB48 zinc finger and BTB domain containing 48 JBrowse link 6 67,410,558 67,418,295 RGD:14298760
telomere maintenance via telomere trimming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NBN nibrin JBrowse link 4 46,787,664 46,854,331 RGD:9068941
G XRCC3 X-ray repair cross complementing 3 RGD:9068941
telomeric 3' overhang formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DCLRE1B DNA cross-link repair 1B JBrowse link 4 106,646,591 106,656,490 RGD:14298760
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 9 26,572,352 26,634,596 RGD:14298760
G NBN nibrin JBrowse link 4 46,787,664 46,854,331 RGD:14298760
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:9068941
telomeric D-loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BLM BLM RecQ like helicase JBrowse link 7 53,317,515 53,412,649 RGD:14298760
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:14298760
G RECQL4 RecQ like helicase 4 JBrowse link 4 287,206 293,629 RGD:9068941
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit JBrowse link 3 18,346,501 18,349,509 RGD:9068941
G SLX4 SLX4 structure-specific endonuclease subunit JBrowse link 3 38,646,904 38,670,173 RGD:14298760
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:14298760
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
G WRN WRN RecQ like helicase JBrowse link 15 53,966,968 54,094,855 RGD:14298760
telomeric DNA-containing double minutes formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 6 51,783,537 51,808,898 RGD:9068941
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 3 29,266,234 29,306,109 RGD:14298760
G XRCC1 X-ray repair cross complementing 1 JBrowse link 6 50,403,691 50,425,730 RGD:14298760
G XRCC4 X-ray repair cross complementing 4 JBrowse link 2 91,358,348 91,643,697 RGD:9068941
telomeric loop disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RTEL1 regulator of telomere elongation helicase 1 JBrowse link 17 62,611,844 62,636,628 RGD:14298760
telomeric loop formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DCLRE1B DNA cross-link repair 1B JBrowse link 4 106,646,591 106,656,490 RGD:14298760
G POT1 protection of telomeres 1 JBrowse link 18 22,885,704 22,981,893 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:9068941
G TERF2 telomeric repeat binding factor 2 JBrowse link 6 17,605,748 17,631,795 RGD:14298760
G TERF2IP TERF2 interacting protein JBrowse link 6 12,047,409 12,057,451 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16412
    cellular process 15624
      cellular component organization or biogenesis 5902
        cellular component organization 5740
          organelle organization 3604
            chromosome organization 1067
              telomere organization 127
                shelterin complex assembly + 1
                subtelomeric heterochromatin assembly + 3
                subtelomeric heterochromatin organization + 3
                telomere assembly + 7
                telomere maintenance + 125
                telomere-telomerase complex assembly 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.