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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of actin filament bundle assembly
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Accession:GO:0032233 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the assembly of actin filament bundles.
Synonyms:exact_synonym: up regulation of actin filament bundle formation;   upregulation of actin filament bundle formation
 narrow_synonym: activation of actin filament bundle formation;   stimulation of actin filament bundle formation


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positive regulation of actin filament bundle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cl1 C-X3-C motif chemokine ligand 1 IEA
ISO
GO_REF:0000107
UniProtKB:P35411 (PMID:10415068)
Ensembl
RGD
PMID:10415068 GO_REF:0000107 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800
JBrowse link
G Flna filamin A IMP RGD PMID:22872576 RGD:7207404 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein IMP RGD PMID:16628634 RGD:9686088 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Limk1 LIM domain kinase 1 ISO (PMID:17512523) RGD PMID:17512523 NCBI chr12:25,036,630...25,070,538
Ensembl chr12:25,036,605...25,070,539
JBrowse link
G LOC100909840 profilin-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:148,044,714...148,050,464
Ensembl chr 2:147,955,196...148,050,438
JBrowse link
G Mk1 Mk1 protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:20,531,720...20,534,209
Ensembl chr16:20,531,720...20,534,209
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 ISO MGI:5319219 (MGI:5317250|PMID:21406566) RGD PMID:21406566 MGI:5317250 NCBI chr 7:98,820,799...98,960,878
Ensembl chr 7:98,820,812...98,960,837
JBrowse link
G Pfn1 profilin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,273,003...57,275,708
Ensembl chr10:57,273,005...57,275,708
JBrowse link
G Pfn2 profilin 2 ISO
IBA
(PMID:23153535)
PMID:21873635
RGD PMID:23153535, PMID:21873635 RGD:13792537 NCBI chr 2:147,953,858...147,959,692
Ensembl chr 2:147,955,196...148,050,438
JBrowse link
G Pfn3 profilin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,746,485...9,747,012
Ensembl chr17:9,746,485...9,747,012
JBrowse link
G Plek pleckstrin ISO (PMID:10497244) RGD PMID:10497244 NCBI chr14:100,151,518...100,184,192
Ensembl chr14:100,151,210...100,217,913
JBrowse link
G Swap70 switching B-cell complex subunit SWAP70 ISO (MGI:5554982|PMID:23921380) RGD PMID:23921380 MGI:5554982 NCBI chr 1:174,862,683...174,924,101
Ensembl chr 1:174,862,698...174,924,078
JBrowse link
G Synpo synaptopodin IEA
ISO
IBA
GO_REF:0000002
(MGI:3577135|PMID:15841212)
PMID:21873635
InterPro
RGD
PMID:15841212, PMID:21873635 GO_REF:0000002, MGI:3577135, RGD:13792537 NCBI chr18:55,863,081...55,921,412
Ensembl chr18:55,865,467...55,916,220
JBrowse link
G Synpo2 synaptopodin 2 ISO
IBA
(PMID:24005909)
PMID:21873635
RGD PMID:24005909, PMID:21873635 RGD:13792537 NCBI chr 2:227,255,243...227,411,924
Ensembl chr 2:227,255,902...227,411,964
JBrowse link
G Synpo2l synaptopodin 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:4,064,706...4,074,151
Ensembl chr15:4,064,706...4,072,635
JBrowse link
G Vil1 villin 1 ISO (PMID:19808673) RGD PMID:19808673 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link
positive regulation of stress fiber assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Apoa1 apolipoprotein A1 ISO (PMID:23726972) RGD PMID:23726972 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Arhgef10 Rho guanine nucleotide exchange factor 10 ISO
IBA
(PMID:16896804)
PMID:21873635
RGD PMID:16896804, PMID:21873635 RGD:13792537 NCBI chr16:79,725,629...79,817,065
Ensembl chr16:79,725,643...79,793,619
JBrowse link
G Arhgef10l Rho guanine nucleotide exchange factor 10 like ISO
IBA
(PMID:16112081)
PMID:21873635
RGD PMID:16112081, PMID:21873635 RGD:13792537 NCBI chr 5:159,018,373...159,089,383
Ensembl chr 5:159,018,893...159,119,171
JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 IDA PMID:12775584 UniProt PMID:12775584 RGD:8554375 NCBI chr10:55,532,097...55,545,675
Ensembl chr10:55,532,077...55,544,429
JBrowse link
G Arhgef5 Rho guanine nucleotide exchange factor 5 ISO (PMID:15601624) RGD PMID:15601624 NCBI chr 4:72,710,775...72,736,415
Ensembl chr 4:72,718,458...72,735,007
JBrowse link
G Bag4 BAG cochaperone 4 ISO (MGI:5292318|PMID:21712384) RGD PMID:21712384 MGI:5292318 NCBI chr16:71,057,709...71,075,874
Ensembl chr16:71,058,022...71,075,320
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO MGI:104572 (MGI:3047520|PMID:15199148) RGD PMID:15199148 MGI:3047520 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 ISO (PMID:16054028)
(MGI:3588909|PMID:16054028)
RGD PMID:16054028 MGI:3588909 NCBI chr17:43,050,282...43,339,403
Ensembl chr17:43,050,789...43,339,403
JBrowse link
G Ccdc88a coiled coil domain containing 88A ISO (PMID:16139227) RGD PMID:16139227 NCBI chr14:113,771,093...113,936,376
Ensembl chr14:113,867,209...113,932,263
JBrowse link
G Ccn2 cellular communication network factor 2 ISO (PMID:20008146) RGD PMID:20008146 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Cd47 Cd47 molecule IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175
JBrowse link
G Cdc42 cell division cycle 42 ISO (PMID:26051942), (PMID:8625410) RGD PMID:8625410, PMID:26051942 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Epha1 Eph receptor A1 ISS
ISO
GO_REF:0000024
(MGI:5294306|PMID:12775584)
UniProt
RGD
PMID:12775584 GO_REF:0000024, MGI:5294306 NCBI chr 4:71,749,100...71,763,681
Ensembl chr 4:71,749,242...71,763,679
JBrowse link
G Evl Enah/Vasp-like ISO (PMID:23153535) RGD PMID:23153535 NCBI chr 6:132,470,283...132,590,242
Ensembl chr 6:132,510,757...132,590,241
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Fhod1 formin homology 2 domain containing 1 ISO (PMID:15095401) RGD PMID:15095401 NCBI chr19:37,284,923...37,303,855
Ensembl chr19:37,284,923...37,303,788
JBrowse link
G Gpr65 G-protein coupled receptor 65 ISO (PMID:15618224) RGD PMID:15618224 NCBI chr 6:122,248,528...122,256,115
Ensembl chr 6:122,254,841...122,256,251
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 ISO (MGI:5486551|PMID:17654484) RGD PMID:17654484 MGI:5486551 NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
JBrowse link
G Kiss1r KISS1 receptor IDA RGD PMID:11457843 RGD:1357971 NCBI chr 7:12,606,210...12,609,868
Ensembl chr 7:12,606,210...12,609,868
JBrowse link
G Limch1 LIM and calponin homology domains 1 ISO
IBA
(PMID:28228547)
PMID:21873635
RGD PMID:28228547, PMID:21873635 RGD:13792537 NCBI chr14:42,760,363...43,072,976
Ensembl chr14:42,762,587...43,072,843
JBrowse link
G Limk1 LIM domain kinase 1 IEA
ISO
IBA
GO_REF:0000107
MGI:88190 (MGI:3047520|PMID:15199148)
PMID:21873635
Ensembl
RGD
PMID:15199148, PMID:21873635 GO_REF:0000107, MGI:3047520, RGD:13792537 NCBI chr12:25,036,630...25,070,538
Ensembl chr12:25,036,605...25,070,539
JBrowse link
G LOC100909840 profilin-2-like IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:148,044,714...148,050,464
Ensembl chr 2:147,955,196...148,050,438
JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISS
ISO
GO_REF:0000024
(MGI:5645214|PMID:9600933)
UniProt
RGD
PMID:9600933 GO_REF:0000024, MGI:5645214 NCBI chr 5:75,557,038...75,678,067
Ensembl chr 5:75,557,042...75,676,584
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (MGI:3510095|PMID:15467718) RGD PMID:15467718 MGI:3510095 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Myoc myocilin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19188438)
Ensembl
UniProt
RGD
PMID:19188438 GO_REF:0000024, GO_REF:0000107 NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
JBrowse link
G Nf2 neurofibromin 2 ISO
IEA
(PMID:9537418)
GO_REF:0000107
RGD
Ensembl
PMID:9537418 GO_REF:0000107 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Nox4 NADPH oxidase 4 IMP RGD PMID:17511984 RGD:2324670 NCBI chr 1:150,796,359...150,976,186
Ensembl chr 1:150,797,084...150,976,194
JBrowse link
G Nrp1 neuropilin 1 ISO (PMID:26051942) RGD PMID:26051942 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO
ISS
(PMID:11864573)
GO_REF:0000024
RGD
UniProt
PMID:11864573 GO_REF:0000024 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pdlim4 PDZ and LIM domain 4 IDA
IMP
PMID:14729062
PMID:22659164
UniProt PMID:14729062, PMID:22659164 RGD:1300470, RGD:13432282 NCBI chr10:39,390,578...39,405,322
Ensembl chr10:39,390,581...39,405,311
JBrowse link
G Pfn1 profilin 1 IMP RGD PMID:12740026 RGD:2324854 NCBI chr10:57,273,003...57,275,708
Ensembl chr10:57,273,005...57,275,708
JBrowse link
G Pfn2 profilin 2 IEA
ISO
GO_REF:0000107
(MGI:5545940|PMID:23153535)
(PMID:23153535)
Ensembl
RGD
PMID:23153535 GO_REF:0000107, MGI:5545940 NCBI chr 2:147,953,858...147,959,692
Ensembl chr 2:147,955,196...148,050,438
JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E ISO (PMID:11864573) RGD PMID:11864573 NCBI chr10:74,548,270...74,679,858
Ensembl chr10:74,548,270...74,679,858
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F ISO RNAcentral:URS00001C770D_9606 (PMID:11864573), (PMID:20016286), (PMID:26498692) RGD PMID:11864573, PMID:20016286, PMID:26498692 NCBI chr11:88,313,709...88,343,726
Ensembl chr11:88,313,709...88,343,627
JBrowse link
G Prkcq protein kinase C, theta IMP RGD PMID:9353339 RGD:1625621 NCBI chr17:70,971,915...71,105,286
Ensembl chr17:70,971,915...71,105,286
JBrowse link
G Pxn paxillin ISO (PMID:24863063) RGD PMID:24863063 NCBI chr12:46,797,953...46,845,107
Ensembl chr12:46,797,954...46,845,080
JBrowse link
G Rac1 Rac family small GTPase 1 ISO (PMID:23129259), (PMID:8625410) RGD PMID:8625410, PMID:23129259 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 ISO
IEA
ISS
(PMID:21840392)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21840392 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551
JBrowse link
G Rgcc regulator of cell cycle ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:61,551,861...61,564,695
Ensembl chr15:61,551,861...61,564,695
JBrowse link
G Rhoa ras homolog family member A ISO (PMID:15467718), (PMID:8625410) RGD PMID:8625410, PMID:15467718 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rhoc ras homolog family member C ISO (PMID:20232393) RGD PMID:20232393 NCBI chr 2:207,271,692...207,278,010
Ensembl chr 2:207,271,853...207,279,314
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 IEA
ISO
GO_REF:0000107
(PMID:20232393)
Ensembl
RGD
PMID:20232393 GO_REF:0000107 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G S100a10 S100 calcium binding protein A10 ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:193,892,589...193,901,236
Ensembl chr 2:193,892,589...193,901,236
JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
JBrowse link
G Serpinf2 serpin family F member 2 ISO (PMID:20008146) RGD PMID:20008146 NCBI chr10:62,264,247...62,272,353
Ensembl chr10:62,264,788...62,273,119
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B ISO (MGI:5800302|PMID:27711054) RGD PMID:27711054 MGI:5800302 NCBI chr10:17,209,152...17,296,449
Ensembl chr10:17,209,212...17,291,876
JBrowse link
G Smad3 SMAD family member 3 IDA during transdifferentiation RGD PMID:15987742 RGD:2300418 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Sorbs3 sorbin and SH3 domain containing 3 ISO (PMID:9885244) RGD PMID:9885244 NCBI chr15:51,859,004...51,895,707
Ensembl chr15:51,859,462...51,890,832
JBrowse link
G Synpo2l synaptopodin 2-like ISO (MGI:6102963|PMID:29206857) RGD PMID:29206857 MGI:6102963 NCBI chr15:4,064,706...4,074,151
Ensembl chr15:4,064,706...4,072,635
JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:17435548 RGD:2304338 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:17435548 RGD:2304338 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 IDA
IBA
PMID:18216281
PMID:21873635
ARUK-UCL
GO_Central
PMID:18216281, PMID:21873635 RGD:13461749, RGD:13792537 NCBI chr 5:58,937,615...58,943,358
Ensembl chr 5:58,937,615...58,943,358
JBrowse link
G Tgfb3 transforming growth factor, beta 3 ISO (PMID:18718461) RGD PMID:18718461 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 ISO UniProtKB:P10600 (MGI:3820811|PMID:18718461) RGD PMID:18718461 MGI:3820811 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Tpm1 tropomyosin 1 IGI PMID:15897890 BHF-UCL PMID:15897890 RGD:8656006 NCBI chr 8:72,814,737...72,841,496
Ensembl chr 8:72,814,740...72,842,228
JBrowse link
G Tsc1 TSC complex subunit 1 IMP RGD PMID:15611338 RGD:1601406 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Wnt11 Wnt family member 11 ISO (PMID:20103596) RGD PMID:20103596 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt4 Wnt family member 4 IEA
ISO
GO_REF:0000107
UniProtKB:P01112 (MGI:5487484|PMID:23027131)
Ensembl
RGD
PMID:23027131 GO_REF:0000107, MGI:5487484 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      positive regulation of cellular process 6145
        positive regulation of cellular component biogenesis 563
          positive regulation of actin filament bundle assembly 70
            positive regulation of formin-nucleated actin cable assembly 0
            positive regulation of stress fiber assembly 59
Path 2
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular component organization or biogenesis 6789
        cellular component organization 6534
          organelle organization 4101
            cytoskeleton organization 1459
              actin cytoskeleton organization 747
                actin filament organization 466
                  actin filament bundle organization 180
                    actin filament bundle assembly 177
                      regulation of actin filament bundle assembly 111
                        positive regulation of actin filament bundle assembly 70
                          positive regulation of formin-nucleated actin cable assembly 0
                          positive regulation of stress fiber assembly 59
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.