Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:secretory granule localization
go back to main search page
Accession:GO:0032252 term browser browse the term
Definition:Any process in which a secretory granule is transported to, and/or maintained in, a specific location within the cell.
Synonyms:exact_synonym: secretory granule localisation
 related_synonym: secretory granule clustering


show annotations for term's descendants           Sort by:
 
secretory granule localization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo5a myosin VA IDA
IEA
ISO
IMP
GO_REF:0000107
(MGI:MGI:3589494|PMID:15788565)
Ensembl
RGD
PMID:15788565, PMID:12615975, PMID:16190983 GO_REF:0000107, MGI:MGI:3589494, RGD:1298991, RGD:1600832 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma IMP RGD PMID:19549714 RGD:2324863 NCBI chr 6:51,465,696...51,501,234
Ensembl chr 6:51,465,908...51,498,337
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 ISO MGI:MGI:2386261 (MGI:MGI:3758152|PMID:17190838) RGD PMID:17190838 MGI:MGI:3758152 NCBI chr 3:108,984,029...109,044,420
Ensembl chr 3:108,984,029...109,044,420
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (MGI:MGI:4412432|PMID:19168596) RGD PMID:19168596 MGI:MGI:4412432 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Uso1 USO1 vesicle transport factor ISO (MGI:MGI:3589498|PMID:15800058) RGD PMID:15800058 MGI:MGI:3589498 NCBI chr14:17,371,451...17,436,948
Ensembl chr14:17,371,453...17,436,897
JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Kif1b kinesin family member 1B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif1c kinesin family member 1C IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:57,322,259...57,352,395
Ensembl chr10:57,322,331...57,351,353
JBrowse link
G Sybu syntabulin IMP RGD PMID:17611281 RGD:13217407 NCBI chr 7:83,600,614...83,670,121
Ensembl chr 7:83,600,617...83,670,356
JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IMP PMID:30021165
PMID:29166604
UniProt PMID:30021165, PMID:29166604 RGD:14995321, RGD:15023486 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 ISO (PMID:30021165) RGD PMID:30021165 NCBI chr 7:48,548,932...49,045,852
Ensembl chr 7:48,867,664...49,042,455
JBrowse link
G Syt4 synaptotagmin 4 IMP
ISO
PMID:29166604
(MGI:MGI:6104122|PMID:29166604)
RGD PMID:29166604, PMID:29166604 MGI:MGI:6104122, RGD:15023486 NCBI chr18:24,172,580...24,181,989
Ensembl chr18:24,172,587...24,182,012
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr10:93,811,350...94,132,418
Ensembl chr10:93,811,350...94,127,697
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Trim46 tripartite motif-containing 46 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:188,548,608...188,561,617
Ensembl chr 2:188,548,644...188,561,360
JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 IDA PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Kif1b kinesin family member 1B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif1c kinesin family member 1C IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:57,322,259...57,352,395
Ensembl chr10:57,322,331...57,351,353
JBrowse link
G Kif5a kinesin family member 5A IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Kif5b kinesin family member 5B IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    localization 6496
      cellular localization 2966
        organelle localization 573
          vesicle localization 179
            secretory granule localization 18
              dense core granule localization + 13
              establishment of secretory granule localization + 0
              maintenance of secretory granule location + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.