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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor connecting cilium
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Accession:GO:0032391 term browser browse the term
Definition:The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone.
Synonyms:related_synonym: photoreceptor cilium


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photoreceptor connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link NW_004955418 20,603,323 21,039,891 RGD:9068941
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link NW_004955485 7,739,556 7,772,582 RGD:9068941
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link NW_004955450 4,624,634 4,668,470 RGD:9068941
G Cep290 centrosomal protein 290 JBrowse link NW_004955405 25,533,037 25,607,021 RGD:9068941
G Cetn1 centrin 1 JBrowse link NW_004955402 9,381,400 9,382,158 RGD:9068941
G Cetn2 centrin 2 JBrowse link NW_004955498 8,131,356 8,135,751 RGD:9068941
G Cetn3 centrin 3 JBrowse link NW_004955418 21,206,387 21,220,984 RGD:9068941
G Cfap410 cilia and flagella associated protein 410 JBrowse link NW_004955407 41,120,820 41,128,089 RGD:9068941
G Gnat1 G protein subunit alpha transducin 1 JBrowse link NW_004955532 2,018,850 2,023,603 RGD:9068941
G Ift122 intraflagellar transport 122 JBrowse link NW_004955429 17,795,757 17,858,609 RGD:9068941
G Ift140 intraflagellar transport 140 JBrowse link NW_004955442 15,625,429 15,719,006 RGD:9068941
G Ift20 intraflagellar transport 20 JBrowse link NW_004955481 4,799,548 4,807,751 RGD:9068941
G Ift52 intraflagellar transport 52 JBrowse link NW_004955445 13,542,726 13,580,204 RGD:9068941
G Ift57 intraflagellar transport 57 JBrowse link NW_004955427 8,814,298 8,871,671 RGD:9068941
G Ift88 intraflagellar transport 88 JBrowse link NW_004955497 1,338,959 1,454,788 RGD:9068941
G Iqcb1 IQ motif containing B1 JBrowse link NW_004955427 21,120,012 21,171,838 RGD:9068941
G Kiaa1549 KIAA1549 ortholog JBrowse link NW_004955494 4,067,813 4,152,368 RGD:9068941
G Kif17 kinesin family member 17 JBrowse link NW_004955452 1,197,839 1,239,209 RGD:9068941
G Kif3a kinesin family member 3A JBrowse link NW_004955408 4,072,823 4,115,975 RGD:9068941
G Lca5 lebercilin LCA5 JBrowse link NW_004955502 7,325,650 7,373,641 RGD:9068941
G Mak male germ cell associated kinase JBrowse link NW_004955465 3,556,733 3,615,126 RGD:9068941
G Myo7a myosin VIIA JBrowse link NW_004955414 14,576,356 14,647,500 RGD:9068941
G Nphp1 nephrocystin 1 JBrowse link NW_004955470 3,261,455 3,305,989 RGD:9068941
G Nphp4 nephrocystin 4 JBrowse link NW_004955486 6,442,058 6,547,451 RGD:9068941
G Rp1 RP1 axonemal microtubule associated JBrowse link NW_004955454 13,781,556 14,082,310 RGD:9068941
G Rp1l1 RP1 like 1 JBrowse link NW_004955403 52,180,612 52,200,569 RGD:9068941
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link NW_004955601 398,772 453,271 RGD:9068941
G Rpgrip1 RPGR interacting protein 1 JBrowse link NW_004955550 2,015,319 2,073,627 RGD:9068941
G Rpgrip1l RPGRIP1 like JBrowse link NW_004955433 11,321,504 11,423,981 RGD:9068941
G Septin2 septin 2 JBrowse link NW_004955542 401,081 444,304 RGD:9068941
G Spata7 spermatogenesis associated 7 JBrowse link NW_004955438 11,033,089 11,069,178 RGD:9068941
G Sptbn5 spectrin beta, non-erythrocytic 5 JBrowse link NW_004955416 8,643,177 8,684,469 RGD:9068941
G Tbcc tubulin folding cofactor C JBrowse link NW_004955437 8,808,021 8,809,598 RGD:9068941
G Tmem237 transmembrane protein 237 JBrowse link NW_004955403 148,181 173,350 RGD:9068941
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link NW_004955472 3,073,090 3,076,607 RGD:9068941
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link NW_004955438 11,410,196 11,466,044 RGD:9068941
G Ush1g USH1 protein network component sans JBrowse link NW_004955553 1,788,443 1,795,139 RGD:9068941
G Ush2a usherin JBrowse link NW_004955406 1,837,831 2,499,664 RGD:9068941
G Wdr19 WD repeat domain 19 JBrowse link NW_004955443 8,053,847 8,122,918 RGD:9068941
G Whrn whirlin JBrowse link NW_004955419 13,116,001 13,207,266 RGD:9068941
photoreceptor distal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link NW_004955439 1,277,185 1,460,296 RGD:9068941
G Cep290 centrosomal protein 290 JBrowse link NW_004955405 25,533,037 25,607,021 RGD:9068941
G Nphp1 nephrocystin 1 JBrowse link NW_004955470 3,261,455 3,305,989 RGD:9068941
G Nphp4 nephrocystin 4 JBrowse link NW_004955486 6,442,058 6,547,451 RGD:9068941
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link NW_004955601 398,772 453,271 RGD:9068941
G Rpgrip1 RPGR interacting protein 1 JBrowse link NW_004955550 2,015,319 2,073,627 RGD:9068941
G Spata7 spermatogenesis associated 7 JBrowse link NW_004955438 11,033,089 11,069,178 RGD:9068941
photoreceptor proximal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep290 centrosomal protein 290 JBrowse link NW_004955405 25,533,037 25,607,021 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 11978
    cellular anatomical entity 11810
      ciliary transition zone 68
        photoreceptor connecting cilium 41
          photoreceptor distal connecting cilium 7
          photoreceptor proximal connecting cilium 1
Path 2
Term Annotations click to browse term
  cellular_component 11978
    cellular anatomical entity 11810
      cell projection 2019
        plasma membrane bounded cell projection 1992
          cilium 567
            non-motile cilium 141
              9+0 non-motile cilium 108
                photoreceptor cell cilium 102
                  photoreceptor connecting cilium 41
                    photoreceptor distal connecting cilium 7
                    photoreceptor proximal connecting cilium 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.