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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor connecting cilium
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Accession:GO:0032391 term browser browse the term
Definition:The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone.
Synonyms:related_synonym: photoreceptor cilium


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photoreceptor connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADGRV1 adhesion G protein-coupled receptor V1 JBrowse link 3 17,866,459 18,351,532 RGD:9068941
G ARL3 ADP ribosylation factor like GTPase 3 JBrowse link 28 15,152,762 15,189,043 RGD:9068941
G BBS4 Bardet-Biedl syndrome 4 JBrowse link 30 36,058,932 36,109,206 RGD:9068941
G CEP290 centrosomal protein 290 JBrowse link 15 29,194,449 29,281,351 RGD:9068941
G CETN1 centrin 1 JBrowse link 7 67,431,020 67,431,774 RGD:13508589
G CETN2 centrin 2 JBrowse link X 120,714,676 120,720,012 RGD:9068941
G CETN3 centrin 3 JBrowse link 3 18,529,198 18,547,195 RGD:9068941
G CFAP410 cilia and flagella associated protein 410 JBrowse link 31 38,183,181 38,192,739 RGD:9068941
G FAM161A FAM161 centrosomal protein A JBrowse link 10 61,774,879 61,839,853 RGD:13508589
G GNAT1 G protein subunit alpha transducin 1 JBrowse link 20 39,128,244 39,133,280 RGD:13508589
G IFT122 intraflagellar transport 122 JBrowse link 20 5,644,002 5,716,702 RGD:13508589
G IFT140 intraflagellar transport 140 JBrowse link 6 39,262,887 39,308,912 RGD:9068941
G IFT20 intraflagellar transport 20 JBrowse link 9 42,581,117 42,587,830 RGD:13508589
G IFT52 intraflagellar transport 52 JBrowse link 24 31,295,987 31,334,825 RGD:13508589
G IFT57 intraflagellar transport 57 JBrowse link 33 13,432,902 13,486,692 RGD:13508589
G IFT88 intraflagellar transport 88 JBrowse link 25 17,414,965 17,551,405 RGD:9068941
G IQCB1 IQ motif containing B1 JBrowse link 33 25,046,975 25,113,252 RGD:13508589
G KIAA1549 KIAA1549 JBrowse link 16 9,681,889 9,839,844 RGD:9068941
G KIF17 kinesin family member 17 JBrowse link 2 78,224,838 78,266,612 RGD:9068941
G KIF3A kinesin family member 3A JBrowse link 11 20,988,516 21,044,151 RGD:13508589
G KIFAP3 kinesin associated protein 3 JBrowse link 7 28,581,855 28,739,327 RGD:13508589
G LCA5 lebercilin LCA5 JBrowse link 12 40,443,759 40,527,300 RGD:9068941
G LOC487178 protocadherin beta-15 JBrowse link 2 36,251,313 36,271,637 RGD:9068941
G MAK male germ cell associated kinase JBrowse link 35 10,474,081 10,530,951 RGD:9068941
G MYO7A myosin VIIA JBrowse link 21 21,539,735 21,624,063 RGD:13508589
G NPHP1 nephrocystin 1 JBrowse link 17 35,076,527 35,136,674 RGD:9068941
G NPHP4 nephrocystin 4 JBrowse link 5 59,819,236 59,936,220 RGD:9068941
G PDZD7 PDZ domain containing 7 JBrowse link 28 13,693,032 13,711,654 RGD:13508589
G RP1 RP1 axonemal microtubule associated JBrowse link 29 6,079,519 6,136,009 RGD:13508589
G RP1L1 RP1 like 1 JBrowse link 25 27,317,102 27,332,075 RGD:9068941
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 33,056,371 33,105,036 RGD:9068941
G RPGRIP1 RPGR interacting protein 1 JBrowse link 15 18,316,887 18,388,724 RGD:13508589
G RPGRIP1L RPGRIP1 like JBrowse link 2 62,080,159 62,179,694 RGD:9068941
G SEPTIN2 septin 2 JBrowse link 25 51,296,486 51,330,508 RGD:9068941
G SPATA7 spermatogenesis associated 7 JBrowse link 8 59,658,295 59,697,409 RGD:9068941
G SPTBN5 spectrin beta, non-erythrocytic 5 JBrowse link 30 8,877,155 8,922,749 RGD:13508589
G TBCC tubulin folding cofactor C JBrowse link 12 11,332,736 11,334,799 RGD:13508589
G TMEM237 transmembrane protein 237 JBrowse link 37 10,691,010 10,709,632 RGD:13508589
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link 11 49,809,156 49,821,224 RGD:13508589
G TSGA10IP testis specific 10 interacting protein JBrowse link 18 51,315,150 51,323,769 RGD:13508589
G TTC8 tetratricopeptide repeat domain 8 JBrowse link 8 60,061,670 60,115,464 RGD:13508589
G USH1C USH1 protein network component harmonin JBrowse link 21 40,055,786 40,100,685 RGD:13508589
G USH1G USH1 protein network component sans JBrowse link 9 5,527,935 5,532,940 RGD:9068941
G USH2A usherin JBrowse link 38 11,063,221 11,750,444 RGD:13508589
RGD:9068941
G WDR19 WD repeat domain 19 JBrowse link 3 73,115,560 73,213,823 RGD:9068941
G WHRN whirlin JBrowse link 11 68,617,383 68,699,824 RGD:13508589
RGD:9068941
photoreceptor distal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHI1 Abelson helper integration site 1 JBrowse link 1 27,966,101 28,199,163 RGD:9068941
G CEP290 centrosomal protein 290 JBrowse link 15 29,194,449 29,281,351 RGD:9068941
G NPHP1 nephrocystin 1 JBrowse link 17 35,076,527 35,136,674 RGD:9068941
G NPHP4 nephrocystin 4 JBrowse link 5 59,819,236 59,936,220 RGD:13508589
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 33,056,371 33,105,036 RGD:9068941
G RPGRIP1 RPGR interacting protein 1 JBrowse link 15 18,316,887 18,388,724 RGD:13508589
G SPATA7 spermatogenesis associated 7 JBrowse link 8 59,658,295 59,697,409 RGD:13508589
photoreceptor proximal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEP290 centrosomal protein 290 JBrowse link 15 29,194,449 29,281,351 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16225
    cellular anatomical entity 16057
      ciliary transition zone 73
        photoreceptor connecting cilium 47
          photoreceptor distal connecting cilium 7
          photoreceptor proximal connecting cilium 1
Path 2
Term Annotations click to browse term
  cellular_component 16225
    cellular anatomical entity 16057
      cell projection 2291
        plasma membrane bounded cell projection 2247
          cilium 626
            non-motile cilium 165
              9+0 non-motile cilium 132
                photoreceptor cell cilium 117
                  photoreceptor connecting cilium 47
                    photoreceptor distal connecting cilium 7
                    photoreceptor proximal connecting cilium 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.