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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor connecting cilium
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Accession:GO:0032391 term browser browse the term
Definition:The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone.
Synonyms:related_synonym: photoreceptor cilium


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photoreceptor connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADGRV1 adhesion G protein-coupled receptor V1 JBrowse link 5 90,558,796 91,164,437 RGD:9068941
G ARL3 ADP ribosylation factor like GTPase 3 JBrowse link 10 102,673,731 102,714,397 RGD:2290271
G BBS4 Bardet-Biedl syndrome 4 JBrowse link 15 72,686,179 72,738,476 RGD:2290271
G CEP290 centrosomal protein 290 JBrowse link 12 88,049,013 88,142,216 RGD:2290271
G CETN1 centrin 1 JBrowse link 18 580,380 582,114 RGD:2290271
G CETN2 centrin 2 JBrowse link X 152,826,994 152,830,757 RGD:2290271
G CETN3 centrin 3 JBrowse link 5 90,392,257 90,409,786 RGD:2290271
G CFAP410 cilia and flagella associated protein 410 JBrowse link 21 44,328,944 44,339,417 RGD:2290271
G FAM161A FAM161 centrosomal protein A JBrowse link 2 61,800,240 61,854,126 RGD:2290271
G GNAT1 G protein subunit alpha transducin 1 JBrowse link 3 50,191,610 50,197,696 RGD:2290271
G IFT122 intraflagellar transport 122 JBrowse link 3 129,440,036 129,520,507 RGD:2290271
G IFT140 intraflagellar transport 140 JBrowse link 16 1,510,427 1,612,072 RGD:2290271
G IFT20 intraflagellar transport 20 JBrowse link 17 28,328,325 28,335,489 RGD:2290271
G IFT52 intraflagellar transport 52 JBrowse link 20 43,590,937 43,647,299 RGD:2290271
G IFT57 intraflagellar transport 57 JBrowse link 3 108,160,812 108,222,424 RGD:2290271
G IFT88 intraflagellar transport 88 JBrowse link 13 20,566,446 20,691,444 RGD:9068941
G IQCB1 IQ motif containing B1 JBrowse link 3 121,769,761 121,835,079 RGD:2290271
G KIAA1549 KIAA1549 JBrowse link 7 138,831,377 138,981,626 RGD:2290271
G KIF17 kinesin family member 17 JBrowse link 1 20,664,014 20,718,007 RGD:2290271
G KIF3A kinesin family member 3A JBrowse link 5 132,688,808 132,737,563 RGD:2290271
G KIFAP3 kinesin associated protein 3 JBrowse link 1 169,921,326 170,085,203 RGD:2290271
G LCA5 lebercilin LCA5 JBrowse link 6 79,484,991 79,537,430 RGD:2290271
G MAK male germ cell associated kinase JBrowse link 6 10,762,723 10,838,954 RGD:2290271
G MYO7A myosin VIIA JBrowse link 11 77,128,192 77,215,241 RGD:2290271
G NPHP1 nephrocystin 1 JBrowse link 2 110,123,348 110,205,013 RGD:2290271
G NPHP4 nephrocystin 4 JBrowse link 1 5,862,810 5,992,425 RGD:9068941
G PCDHB13 protocadherin beta 13 JBrowse link 5 141,213,919 141,218,979 RGD:2290271
G PCDHB15 protocadherin beta 15 JBrowse link 5 141,245,395 141,249,365 RGD:2290271
G PCDHB8 protocadherin beta 8 JBrowse link 5 141,177,790 141,180,539 RGD:9068941
G PDZD7 PDZ domain containing 7 JBrowse link 10 101,007,679 101,031,157 RGD:2290271
G RP1 RP1 axonemal microtubule associated JBrowse link 8 54,509,448 54,871,720 RGD:2290271
G RP1L1 RP1 like 1 JBrowse link 8 10,606,349 10,655,143 RGD:2290271
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 38,269,163 38,327,509 RGD:9068941
G RPGRIP1 RPGR interacting protein 1 JBrowse link 14 21,287,977 21,351,316 RGD:2290271
G RPGRIP1L RPGRIP1 like JBrowse link 16 53,598,153 53,703,938 RGD:2290271
G SEPTIN2 septin 2 JBrowse link 2 241,315,187 241,354,027 RGD:2290271
G SPATA7 spermatogenesis associated 7 JBrowse link 14 88,385,638 88,470,350 RGD:2290271
G SPTBN5 spectrin beta, non-erythrocytic 5 JBrowse link 15 41,848,146 41,894,053 RGD:2290271
G TBCC tubulin folding cofactor C JBrowse link 6 42,744,498 42,746,103 RGD:2290271
G TMEM237 transmembrane protein 237 JBrowse link 2 201,620,186 201,643,503 RGD:2290271
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link 9 32,540,544 32,552,628 RGD:2290271
G TSGA10IP testis specific 10 interacting protein JBrowse link 11 65,945,445 65,960,437 RGD:2290271
G TTC8 tetratricopeptide repeat domain 8 JBrowse link 14 88,824,153 88,881,079 RGD:2290271
G USH1C USH1 protein network component harmonin JBrowse link 11 17,493,895 17,544,416 RGD:2290271
G USH1G USH1 protein network component sans JBrowse link 17 74,916,083 74,923,255 RGD:2290271
G USH2A usherin JBrowse link 1 215,622,891 216,423,448 RGD:2290271
RGD:9068941
G WDR19 WD repeat domain 19 JBrowse link 4 39,182,473 39,285,810 RGD:2290271
G WHRN whirlin JBrowse link 9 114,402,078 114,505,500 RGD:2290271
RGD:9068941
photoreceptor distal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHI1 Abelson helper integration site 1 JBrowse link 6 135,283,532 135,497,771 RGD:9068941
G CEP290 centrosomal protein 290 JBrowse link 12 88,049,013 88,142,216 RGD:9068941
G NPHP1 nephrocystin 1 JBrowse link 2 110,123,348 110,205,013 RGD:9068941
G NPHP4 nephrocystin 4 JBrowse link 1 5,862,810 5,992,425 RGD:2290271
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 38,269,163 38,327,509 RGD:9068941
G RPGRIP1 RPGR interacting protein 1 JBrowse link 14 21,287,977 21,351,316 RGD:2290271
G SPATA7 spermatogenesis associated 7 JBrowse link 14 88,385,638 88,470,350 RGD:2290271
photoreceptor proximal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEP290 centrosomal protein 290 JBrowse link 12 88,049,013 88,142,216 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19246
    cellular anatomical entity 19006
      ciliary transition zone 78
        photoreceptor connecting cilium 49
          photoreceptor distal connecting cilium 7
          photoreceptor proximal connecting cilium 1
Path 2
Term Annotations click to browse term
  cellular_component 19246
    cellular anatomical entity 19006
      cell projection 2660
        plasma membrane bounded cell projection 2564
          cilium 738
            non-motile cilium 192
              9+0 non-motile cilium 160
                photoreceptor cell cilium 138
                  photoreceptor connecting cilium 49
                    photoreceptor distal connecting cilium 7
                    photoreceptor proximal connecting cilium 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.