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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor connecting cilium
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Accession:GO:0032391 term browser browse the term
Definition:The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone.
Synonyms:related_synonym: photoreceptor cilium


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photoreceptor connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link 13 81,095,068 81,633,391 RGD:2290270
G Arl3 ADP-ribosylation factor-like 3 JBrowse link 19 46,531,109 46,573,182 RGD:2290270
G Bbs4 Bardet-Biedl syndrome 4 (human) JBrowse link 9 59,321,966 59,353,508 RGD:2290270
G Cep290 centrosomal protein 290 JBrowse link 10 100,487,548 100,575,671 RGD:2290270
G Cetn1 centrin 1 JBrowse link 18 9,618,419 9,619,469 RGD:2290270
G Cetn2 centrin 2 JBrowse link X 72,913,565 72,918,344 RGD:2290270
G Cetn3 centrin 3 JBrowse link 13 81,780,636 81,797,155 RGD:2290270
G Cfap410 cilia and flagella associated protein 410 JBrowse link 10 77,978,530 77,985,438 RGD:2290270
G D630045J12Rik RIKEN cDNA D630045J12 gene JBrowse link 6 38,123,174 38,254,139 RGD:2290270
G Fam161a family with sequence similarity 161, member A JBrowse link 11 23,006,721 23,045,743 RGD:2290270
G Gnat1 guanine nucleotide binding protein, alpha transducing 1 JBrowse link 9 107,674,437 107,679,634 RGD:2290270
G Ift122 intraflagellar transport 122 JBrowse link 6 115,853,379 115,926,699 RGD:2290270
G Ift140 intraflagellar transport 140 JBrowse link 17 25,016,083 25,099,499 RGD:2290270
G Ift20 intraflagellar transport 20 JBrowse link 11 78,536,361 78,541,732 RGD:2290270
G Ift52 intraflagellar transport 52 JBrowse link 2 163,017,117 163,046,155 RGD:2290270
G Ift57 intraflagellar transport 57 JBrowse link 16 49,699,294 49,765,126 RGD:2290270
G Ift88 intraflagellar transport 88 JBrowse link 14 57,424,064 57,517,936 RGD:2290270
G Iqcb1 IQ calmodulin-binding motif containing 1 JBrowse link 16 36,828,360 36,872,719 RGD:2290270
G Kif17 kinesin family member 17 JBrowse link 4 138,262,251 138,301,973 RGD:2290270
G Kif3a kinesin family member 3A JBrowse link 11 53,565,701 53,604,248 RGD:2290270
G Kifap3 kinesin-associated protein 3 JBrowse link 1 163,762,138 163,917,107 RGD:2290270
G Lca5 Leber congenital amaurosis 5 (human) JBrowse link 9 83,391,355 83,442,994 RGD:2290270
G Mak male germ cell-associated kinase JBrowse link 13 41,025,007 41,079,706 RGD:2290270
G Myo7a myosin VIIA JBrowse link 7 98,051,054 98,119,522 RGD:2290270
G Nphp1 nephronophthisis 1 (juvenile) homolog (human) JBrowse link 2 127,740,732 127,788,913 RGD:2290270
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) JBrowse link 4 152,476,706 152,563,184 RGD:2290270
G Pcdhb16 protocadherin beta 16 JBrowse link 18 37,477,768 37,483,038 RGD:2290270
G Pcdhb22 protocadherin beta 22 JBrowse link 18 37,518,353 37,521,419 RGD:2290270
G Pdzd7 PDZ domain containing 7 JBrowse link 19 45,026,907 45,058,633 RGD:2290270
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:2290270
G Rp1l1 retinitis pigmentosa 1 homolog like 1 JBrowse link 14 63,992,431 64,033,506 RGD:2290270
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:2290270
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 JBrowse link 14 52,104,241 52,161,339 RGD:2290270
G Rpgrip1l Rpgrip1-like JBrowse link 8 91,217,030 91,313,291 RGD:2290270
G Septin2 septin 2 JBrowse link 1 93,478,981 93,509,733 RGD:2290270
G Spata7 spermatogenesis associated 7 JBrowse link 12 98,628,129 98,669,819 RGD:2290270
G Sptbn5 spectrin beta, non-erythrocytic 5 JBrowse link 2 120,041,493 120,088,913 RGD:2290270
G Tbcc tubulin-specific chaperone C JBrowse link 17 46,890,621 46,892,463 RGD:2290270
G Tmem237 transmembrane protein 237 JBrowse link 1 59,100,584 59,120,422 RGD:2290270
G Topors topoisomerase I binding, arginine/serine-rich JBrowse link 4 40,259,606 40,269,841 RGD:2290270
G Tsga10ip testis specific 10 interacting protein JBrowse link 19 5,390,047 5,402,506 RGD:2290270
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 12 98,920,537 98,983,250 RGD:2290270
G Ush1c USH1 protein network component harmonin JBrowse link 7 46,195,350 46,238,490 RGD:2290270
G Ush1g USH1 protein network component sans JBrowse link 11 115,315,192 115,333,736 RGD:2290270
G Ush2a usherin JBrowse link 1 188,262,838 188,965,497 RGD:2290270
G Wdr19 WD repeat domain 19 JBrowse link 5 65,199,696 65,260,415 RGD:2290270
G Whrn whirlin JBrowse link 4 63,414,908 63,496,083 RGD:2290270
photoreceptor distal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 10 20,952,232 21,080,429 RGD:2290270
G Cep290 centrosomal protein 290 JBrowse link 10 100,487,548 100,575,671 RGD:2290270
G Nphp1 nephronophthisis 1 (juvenile) homolog (human) JBrowse link 2 127,740,732 127,788,913 RGD:2290270
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) JBrowse link 4 152,476,706 152,563,184 RGD:2290270
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:2290270
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 JBrowse link 14 52,104,241 52,161,339 RGD:2290270
G Spata7 spermatogenesis associated 7 JBrowse link 12 98,628,129 98,669,819 RGD:2290270
photoreceptor proximal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep290 centrosomal protein 290 JBrowse link 10 100,487,548 100,575,671 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23077
    cellular anatomical entity 18808
      ciliary transition zone 75
        photoreceptor connecting cilium 48
          photoreceptor distal connecting cilium 7
          photoreceptor proximal connecting cilium 1
Path 2
Term Annotations click to browse term
  cellular_component 23077
    cellular anatomical entity 18808
      cell projection 2583
        plasma membrane bounded cell projection 2356
          cilium 684
            non-motile cilium 162
              9+0 non-motile cilium 123
                photoreceptor cell cilium 117
                  photoreceptor connecting cilium 48
                    photoreceptor distal connecting cilium 7
                    photoreceptor proximal connecting cilium 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.