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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor connecting cilium
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Accession:GO:0032391 term browser browse the term
Definition:The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone.
Synonyms:related_synonym: photoreceptor cilium


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photoreceptor connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link NW_004936469 8,653,031 9,209,840 RGD:9068941
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link NW_004936600 3,190,212 3,229,831 RGD:9068941
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link NW_004936471 31,962,500 32,019,516 RGD:9068941
G Cep290 centrosomal protein 290 JBrowse link NW_004936507 5,223,756 5,305,392 RGD:9068941
G Cetn1 centrin 1 JBrowse link NW_004936550 102,360 103,032 RGD:9068941
G Cetn2 centrin 2 JBrowse link NW_004936714 274,098 279,177 RGD:9068941
G Cetn3 centrin 3 JBrowse link NW_004936469 8,501,572 8,516,722 RGD:9068941
G Cfap410 cilia and flagella associated protein 410 JBrowse link NW_004936500 82,702 90,525 RGD:9068941
G Fam161a FAM161 centrosomal protein A JBrowse link NW_004936491 7,202,877 7,221,493 RGD:9068941
G Gnat1 G protein subunit alpha transducin 1 JBrowse link NW_004936529 1,735,258 1,740,297 RGD:9068941
G Ift122 intraflagellar transport 122 JBrowse link NW_004936602 908,034 956,634 RGD:9068941
G Ift140 intraflagellar transport 140 JBrowse link NW_004936694 2,344,448 2,419,396 RGD:9068941
G Ift20 intraflagellar transport 20 JBrowse link NW_004936538 4,484,484 4,491,688 RGD:9068941
G Ift52 intraflagellar transport 52 JBrowse link NW_004936530 2,965,587 3,003,758 RGD:9068941
G Ift57 intraflagellar transport 57 JBrowse link NW_004936645 1,471,393 1,524,193 RGD:9068941
G Ift88 intraflagellar transport 88 JBrowse link NW_004936720 1,041,216 1,168,725 RGD:9068941
G Iqcb1 IQ motif containing B1 JBrowse link NW_004936536 8,164,120 8,213,690 RGD:9068941
G Kiaa1549 KIAA1549 ortholog JBrowse link NW_004936592 3,132,166 3,215,835 RGD:9068941
G Kif17 kinesin family member 17 JBrowse link NW_004936474 6,598,641 6,642,491 RGD:9068941
G Kif3a kinesin family member 3A JBrowse link NW_004936647 2,461,017 2,502,550 RGD:9068941
G Kifap3 kinesin associated protein 3 JBrowse link NW_004936481 16,664,025 16,777,440 RGD:9068941
G Lca5 lebercilin LCA5 JBrowse link NW_004936510 10,652,378 10,702,761 RGD:9068941
G Mak male germ cell associated kinase JBrowse link NW_004936534 2,170,853 2,239,647 RGD:9068941
G Myo7a myosin VIIA JBrowse link NW_004936498 5,758,572 5,824,526 RGD:9068941
G Nphp4 nephrocystin 4 JBrowse link NW_004936623 802,152 904,198 RGD:9068941
G Rp1 RP1 axonemal microtubule associated JBrowse link NW_004936496 1,396,838 1,411,082 RGD:9068941
G Rp1l1 RP1 like 1 JBrowse link NW_004936675 2,527,406 2,564,464 RGD:9068941
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link NW_004936502 5,163,164 5,212,940 RGD:9068941
G Rpgrip1 RPGR interacting protein 1 JBrowse link NW_004936880 440,900 511,503 RGD:9068941
G Rpgrip1l RPGRIP1 like JBrowse link NW_004936475 6,219,187 6,321,612 RGD:9068941
G Septin2 septin 2 JBrowse link NW_004936745 518,650 555,187 RGD:9068941
G Spata7 spermatogenesis associated 7 JBrowse link NW_004936488 15,878,167 15,911,301 RGD:9068941
G Sptbn5 spectrin beta, non-erythrocytic 5 JBrowse link NW_004936471 5,154,294 5,195,083 RGD:9068941
G Tbcc tubulin folding cofactor C JBrowse link NW_004936476 17,145,956 17,147,299 RGD:9068941
G Tmem237 transmembrane protein 237 JBrowse link NW_004936726 872,368 892,185 RGD:9068941
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link NW_004936524 1,219,101 1,229,937 RGD:9068941
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link NW_004936488 16,258,247 16,306,077 RGD:9068941
G Ush1g USH1 protein network component sans JBrowse link NW_004936594 258,115 262,739 RGD:9068941
G Ush2a usherin JBrowse link NW_004936628 2,123,917 2,859,958 RGD:9068941
G Wdr19 WD repeat domain 19 JBrowse link NW_004936482 6,863,592 6,937,810 RGD:9068941
G Whrn whirlin JBrowse link NW_004936487 3,668,465 3,748,234 RGD:9068941
photoreceptor distal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link NW_004936560 2,881,631 3,057,256 RGD:9068941
G Cep290 centrosomal protein 290 JBrowse link NW_004936507 5,223,756 5,305,392 RGD:9068941
G Nphp4 nephrocystin 4 JBrowse link NW_004936623 802,152 904,198 RGD:9068941
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link NW_004936502 5,163,164 5,212,940 RGD:9068941
G Rpgrip1 RPGR interacting protein 1 JBrowse link NW_004936880 440,900 511,503 RGD:9068941
G Spata7 spermatogenesis associated 7 JBrowse link NW_004936488 15,878,167 15,911,301 RGD:9068941
photoreceptor proximal connecting cilium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep290 centrosomal protein 290 JBrowse link NW_004936507 5,223,756 5,305,392 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12054
    cellular anatomical entity 11885
      ciliary transition zone 69
        photoreceptor connecting cilium 42
          photoreceptor distal connecting cilium 6
          photoreceptor proximal connecting cilium 1
Path 2
Term Annotations click to browse term
  cellular_component 12054
    cellular anatomical entity 11885
      cell projection 2030
        plasma membrane bounded cell projection 2003
          cilium 564
            non-motile cilium 141
              9+0 non-motile cilium 108
                photoreceptor cell cilium 103
                  photoreceptor connecting cilium 42
                    photoreceptor distal connecting cilium 6
                    photoreceptor proximal connecting cilium 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.