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ONTOLOGY REPORT - ANNOTATIONS


Term:actin filament bundle
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Accession:GO:0032432 term browser browse the term
Definition:An assembly of actin filaments that are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.
Synonyms:related_synonym: actin cable
 alt_id: GO:0000141;   GO:0030482


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actin filament bundle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cryab crystallin, alpha B JBrowse link 8 55,178,543 55,182,546 RGD:1598494
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:1624291
G Lcp1 lymphocyte cytosolic protein 1 JBrowse link 15 57,170,566 57,277,811 RGD:1624291
RGD:13792537
G Marcks myristoylated alanine rich protein kinase C substrate JBrowse link 20 42,966,140 42,971,838 RGD:1624291
RGD:1600115
G Micall2 MICAL-like 2 JBrowse link 12 16,988,013 17,016,794 RGD:1624291
RGD:1600115
G Pls1 plastin 1 JBrowse link 8 103,557,361 103,659,625 RGD:13792537
G Pls3 plastin 3 JBrowse link X 119,030,311 119,124,268 RGD:13792537
G Rflna refilin A JBrowse link 12 37,038,732 37,047,628 RGD:1624291
RGD:13792537
G Rflnb refilin B JBrowse link 10 64,196,103 64,202,380 RGD:1624291
RGD:13792537
G Vil1 villin 1 JBrowse link 9 81,689,802 81,717,623 RGD:1624291
cofilin-actin rod term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:11570414
stress fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07007032.1 RGD:1600115
G AABR07025295.1 RGD:1600115
G Ablim1 actin-binding LIM protein 1 JBrowse link 1 277,853,877 278,043,096 RGD:1624291
G Ablim3 actin binding LIM protein family, member 3 JBrowse link 18 57,126,534 57,245,965 RGD:1624291
RGD:13792537
G Acta1 actin, alpha 1, skeletal muscle JBrowse link 19 56,674,072 56,677,084 RGD:1624291
RGD:13792537
RGD:1600115
G Acta2 actin alpha 2, smooth muscle JBrowse link 1 252,537,614 252,550,394 RGD:12879446
G Actb actin, beta JBrowse link 12 13,715,843 13,718,813 RGD:11541102
G Actn1 actinin, alpha 1 JBrowse link 6 103,376,557 103,470,497 RGD:1359754
RGD:1600115
RGD:1624291
G Actn4 actinin alpha 4 JBrowse link 1 87,078,012 87,147,347 RGD:1359754
RGD:1624291
G Amot angiomotin JBrowse link X 116,751,231 116,810,238 RGD:1624291
G Bag3 BAG cochaperone 3 JBrowse link 1 199,941,258 199,965,191 RGD:12793031
G Cnn2 calponin 2 JBrowse link 7 12,782,459 12,787,977 RGD:1624291
G Coro1b coronin 1B JBrowse link 1 219,397,827 219,403,253 RGD:10047170
RGD:1600115
RGD:1624291
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:11040550
G Daam1 dishevelled associated activator of morphogenesis 1 JBrowse link 6 94,606,675 94,739,026 RGD:1624291
RGD:13792537
G Dctn4 dynactin subunit 4 JBrowse link 18 55,797,188 55,824,195 RGD:70710
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:1624304
G Dst dystonin JBrowse link 9 37,902,336 38,296,961 RGD:1624291
G Enah ENAH, actin regulator JBrowse link 13 100,297,421 100,415,335 RGD:1624291
G Fam107a family with sequence similarity 107, member A JBrowse link 15 18,399,145 18,415,959 RGD:1600115
RGD:1624291
G Fblim1 filamin binding LIM protein 1 JBrowse link 5 160,122,466 160,158,921 RGD:1624291
RGD:13792537
G Fermt2 fermitin family member 2 JBrowse link 15 19,807,806 19,876,557 RGD:1624291
G Fhl3 four and a half LIM domains 3 JBrowse link 5 142,688,962 142,696,330 RGD:1624291
RGD:13792537
G Fhod1 formin homology 2 domain containing 1 JBrowse link 19 37,284,923 37,303,855 RGD:1624291
G Flnb filamin B JBrowse link 15 18,750,152 18,883,019 RGD:1624291
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:2317778
RGD:1600115
RGD:1624291
G Gas2l1 growth arrest-specific 2 like 1 JBrowse link 14 85,308,443 85,318,475 RGD:1624291
RGD:12790645
G Gas2l2 growth arrest-specific 2 like 2 JBrowse link 10 70,639,429 70,646,402 RGD:1624291
RGD:1600115
G Ilk integrin-linked kinase JBrowse link 1 170,578,941 170,585,192 RGD:2301740
RGD:13792537
G Lcp1 lymphocyte cytosolic protein 1 JBrowse link 15 57,170,566 57,277,811 RGD:1624291
G Ldb3 LIM domain binding 3 JBrowse link 16 10,878,348 10,943,016 RGD:13792537
G Lima1 LIM domain and actin binding 1 JBrowse link 7 141,428,113 141,528,447 RGD:1624291
G Limch1 LIM and calponin homology domains 1 JBrowse link 14 42,760,363 43,072,976 RGD:1624291
RGD:13792537
G LOC102552318 actin-like JBrowse link 1 217,039,727 217,066,768 RGD:13792537
G LOC108348322 GAS2-like protein 2 RGD:1600115
G Lpp LIM domain containing preferred translocation partner in lipoma JBrowse link 11 79,192,603 79,827,858 RGD:13792537
G Micall2 MICAL-like 2 JBrowse link 12 16,988,013 17,016,794 RGD:1624291
RGD:1600115
G Mlph melanophilin JBrowse link 9 98,072,965 98,108,429 RGD:1624291
G Mprip myosin phosphatase Rho interacting protein JBrowse link 10 46,018,397 46,133,580 RGD:9685557
G Mst1r macrophage stimulating 1 receptor JBrowse link 8 116,686,601 116,700,132 RGD:1624291
G Myh10 myosin heavy chain 10 JBrowse link 10 55,274,910 55,406,738 RGD:1600115
RGD:1624291
G Myh11 myosin heavy chain 11 JBrowse link 10 764,421 859,184 RGD:1624291
G Myh14 myosin heavy chain 14 JBrowse link 1 100,608,975 100,671,086 RGD:1624291
G Myh6 myosin heavy chain 6 JBrowse link 15 33,605,653 33,629,730 RGD:1624291
RGD:1600115
G Myh7 myosin heavy chain 7 JBrowse link 15 33,605,769 33,657,761 RGD:1624291
RGD:1600115
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:1624291
G Myh9l1 myosin heavy chain 9-like 1 JBrowse link 7 118,991,251 119,071,722 RGD:1600115
G Myl12a myosin light chain 12A JBrowse link 9 119,325,282 119,333,012 RGD:1624291
RGD:1600115
G Myl12b myosin light chain 12B JBrowse link 9 119,307,168 119,321,500 RGD:1624291
G Myl9 myosin light chain 9 JBrowse link 3 152,857,573 152,863,961 RGD:1624291
RGD:1600115
G Mylk myosin light chain kinase JBrowse link 11 69,013,060 69,260,039 RGD:1624291
RGD:13792537
G Myo1c myosin 1C JBrowse link 10 63,803,311 63,819,614 RGD:1624291
G Nebl nebulette JBrowse link 17 84,141,014 84,247,038 RGD:1624291
RGD:1600115
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:2324670
G Palld palladin, cytoskeletal associated protein JBrowse link 16 31,865,712 31,948,168 RGD:2325783
RGD:1624291
RGD:15090834
RGD:13432282
RGD:14974248
G Pdlim1 PDZ and LIM domain 1 JBrowse link 1 259,308,326 259,357,006 RGD:13792537
RGD:1624291
RGD:13432282
G Pdlim2 PDZ and LIM domain 2 JBrowse link 15 51,843,562 51,856,785 RGD:1359754
G Pdlim3 PDZ and LIM domain 3 JBrowse link 16 49,543,140 49,574,362 RGD:13792537
G Pdlim4 PDZ and LIM domain 4 JBrowse link 10 39,390,578 39,405,322 RGD:1300470
RGD:13792537
RGD:1624291
RGD:13432282
RGD:1600115
G Pdlim5 PDZ and LIM domain 5 JBrowse link 2 247,815,214 247,989,198 RGD:13792537
G Pdlim7 PDZ and LIM domain 7 JBrowse link 17 9,653,510 9,668,715 RGD:1624291
RGD:13792537
G Pgm5 phosphoglucomutase 5 JBrowse link 1 242,582,591 242,765,837 RGD:1624291
G Prickle4 prickle planar cell polarity protein 4 JBrowse link 9 15,306,901 15,313,047 RGD:13792537
G Prkcz protein kinase C, zeta JBrowse link 5 172,658,071 172,769,492 RGD:1642671
G Pstpip1 proline-serine-threonine phosphatase-interacting protein 1 JBrowse link 8 60,760,040 60,799,364 RGD:1624291
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:1600115
RGD:1624291
G Pxn paxillin JBrowse link 12 46,797,953 46,845,107 RGD:1624291
G Ror1 receptor tyrosine kinase-like orphan receptor 1 JBrowse link 5 118,892,874 119,239,528 RGD:11537371
G Septin11 septin 11 JBrowse link 14 16,369,544 16,405,645 RGD:1624291
G Septin5 septin 5 JBrowse link 11 86,516,377 86,522,169 RGD:8553835
G Septin7 septin 7 JBrowse link 8 26,412,910 26,476,615 RGD:1624291
G Septin9 septin 9 JBrowse link 10 106,208,308 106,340,747 RGD:1624291
G Septin9 septin 9 RGD:1600115
G Sh2b2 SH2B adaptor protein 2 JBrowse link 12 23,471,477 23,501,043 RGD:1624291
G Shroom4 shroom family member 4 JBrowse link X 16,723,360 16,929,829 RGD:1624291
G Sipa1l3 signal-induced proliferation-associated 1 like 3 JBrowse link 1 87,260,832 87,467,846 RGD:1624291
RGD:1600115
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:1624291
RGD:1600115
G Synpo synaptopodin JBrowse link 18 55,863,081 55,921,412 RGD:1624291
RGD:13792537
G Synpo2 synaptopodin 2 JBrowse link 2 227,255,243 227,411,924 RGD:12793031
RGD:1624291
RGD:13792537
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:1624291
G Tlnrd1 talin rod domain containing 1 JBrowse link 1 146,027,821 146,029,840 RGD:1624291
G Tmsb15b2 thymosin beta 15B2 JBrowse link X 107,612,518 107,614,632 RGD:1624291
G Tpm1 tropomyosin 1 JBrowse link 8 72,814,737 72,841,496 RGD:1624291
RGD:1600115
G Tpm3 tropomyosin 3 JBrowse link 2 189,423,534 189,451,340 RGD:1624291
RGD:1600115
G Tpm4 tropomyosin 4 JBrowse link 16 19,385,810 19,399,851 RGD:1624291
G Trip6 thyroid hormone receptor interactor 6 JBrowse link 12 22,451,596 22,456,003 RGD:13792537
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link 13 90,379,203 90,405,627 RGD:1624291
G Vcl vinculin JBrowse link 15 3,455,211 3,544,738 RGD:1624304
G Xirp1 xin actin-binding repeat containing 1 JBrowse link 8 128,694,809 128,712,092 RGD:1624291
G Xirp2 xin actin-binding repeat containing 2 JBrowse link 3 53,563,207 53,658,113 RGD:1600115
RGD:1624291
G Zyx zyxin JBrowse link 4 71,740,188 71,749,386 RGD:1624291
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19949
    cellular anatomical entity 19598
      actin filament bundle 100
        actin rod + 1
        actin tubule 0
        contractile actin filament bundle + 91
        parallel actin filament bundle + 0
Path 2
Term Annotations click to browse term
  cellular_component 19949
    cellular anatomical entity 19598
      organelle 12670
        non-membrane-bounded organelle 4661
          intracellular non-membrane-bounded organelle 4642
            cytoskeleton 2098
              actin cytoskeleton 519
                actin filament bundle 100
                  actin rod + 1
                  actin tubule 0
                  contractile actin filament bundle + 91
                  parallel actin filament bundle + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.