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ONTOLOGY REPORT - ANNOTATIONS


Term:response to peptidoglycan
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Accession:GO:0032494 term browser browse the term
Definition:Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.


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response to peptidoglycan term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 ISO MGI:MGI:1934246 (MGI:MGI:3814295|PMID:17114491) RGD PMID:17114491 MGI:MGI:3814295 NCBI chr 1:78,186,777...78,195,132
Ensembl chr 1:78,186,776...78,195,328
JBrowse link
G Card9 caspase recruitment domain family, member 9 ISO MGI:MGI:3698412 (MGI:MGI:3697751|PMID:17187069) RGD PMID:17187069 MGI:MGI:3697751 NCBI chr 3:3,798,346...3,806,841
Ensembl chr 3:3,798,347...3,806,713
JBrowse link
G Inava innate immunity activator ISO (PMID:28436939) RGD PMID:28436939 NCBI chr13:53,088,438...53,108,713
Ensembl chr13:53,088,439...53,108,713
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 ISO (MGI:MGI:2178646|PMID:10549626) RGD PMID:10549626 MGI:MGI:2178646 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 ISO (MGI:MGI:2183694|PMID:12150927) RGD PMID:12150927 MGI:MGI:2183694 NCBI chr 7:64,922,830...64,982,224
Ensembl chr 7:64,923,615...64,982,281
JBrowse link
G Irf5 interferon regulatory factor 5 ISO (PMID:22412986) RGD PMID:22412986 NCBI chr 4:56,804,477...56,816,271
Ensembl chr 4:56,805,132...56,820,543
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO MGI:MGI:2385681 (MGI:MGI:3640248|PMID:10607756) RGD PMID:10607756 MGI:MGI:3640248 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO MGI:MGI:2680581 (MGI:MGI:3050756|PMID:15220916) RGD PMID:15220916 MGI:MGI:3050756 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Tlr2 toll-like receptor 2 ISO MGI:MGI:2178675|MGI:MGI:2674036 (MGI:MGI:2178646|PMID:10549626), (MGI:MGI:3814295|PMID:17114491) RGD PMID:10549626, PMID:17114491 MGI:MGI:2178646, MGI:MGI:3814295 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Defb25 defensin beta 25 ISO
IBA
(PMID:24955228)
PMID:21873635
RGD PMID:24955228, PMID:21873635 RGD:13792537 NCBI chr 3:148,103,643...148,104,483
Ensembl chr 3:148,103,643...148,104,483
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 ISO (MGI:MGI:5790524|PMID:27374331) RGD PMID:27374331 MGI:MGI:5790524 NCBI chr10:45,884,324...45,918,290
Ensembl chr10:45,893,018...45,918,254
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO
IEP
MGI:MGI:2680581 (MGI:MGI:3686795|PMID:16949315) RGD PMID:16949315, PMID:24169446 MGI:MGI:3686795, RGD:13204728 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:24955228) RGD PMID:24955228 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 ISO MGI:MGI:2660793 (MGI:MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:MGI:2176422 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Tlr2 toll-like receptor 2 ISO (MGI:MGI:3686795|PMID:16949315) RGD PMID:16949315 MGI:MGI:3686795 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:MGI:5572888 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (PMID:12527755), (PMID:15998797) RGD PMID:12527755, PMID:15998797 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:MGI:5572888 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to chemical 6342
        response to oxygen-containing compound 2344
          response to peptidoglycan 15
            cellular response to peptidoglycan 8
            detection of peptidoglycan + 2
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to biotic stimulus 1745
        response to external biotic stimulus 1712
          response to other organism 1708
            response to bacterium 1043
              response to molecule of bacterial origin 539
                response to peptidoglycan 15
                  cellular response to peptidoglycan 8
                  detection of peptidoglycan + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.