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ONTOLOGY REPORT - ANNOTATIONS


Term:microvillus organization
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Accession:GO:0032528 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.
Synonyms:exact_synonym: microvillus organisation
 related_synonym: microvillus organization and biogenesis


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microvillus organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gldn gliomedin IEA
ISO
GO_REF:0000107
MGI:4840020 (MGI:4839704|PMID:20188654)
Ensembl
RGD
PMID:20188654 GO_REF:0000107, MGI:4839704 NCBI chr 8:58,870,516...58,914,605
Ensembl chr 8:58,870,516...58,914,603
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO MGI:3690333 (MGI:5588640|PMID:24675817) RGD PMID:24675817 MGI:5588640 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
microvillar actin bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Espn espin IEA
ISO
GO_REF:0000107
(PMID:29572253)
Ensembl
RGD
PMID:29572253 GO_REF:0000107 NCBI chr 5:169,293,356...169,331,338
Ensembl chr 5:169,293,904...169,331,163
JBrowse link
G Myo1a myosin IA NAS RGD PMID:7779104 RGD:69898 NCBI chr 7:71,000,299...71,019,386
Ensembl chr 7:71,004,417...71,019,372
JBrowse link
microvillus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin NOT ISO (PMID:22797597)
UniProtKB:Q3V0K9|UniProtKB:Q62468 (MGI:5621262|PMID:22114352)
RGD PMID:22114352, PMID:22797597 MGI:5621262 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Klf5 Kruppel-like factor 5 ISO MGI:3038696 (MGI:2183884|PMID:12101409) RGD PMID:12101409 MGI:2183884 NCBI chr15:83,703,796...83,722,921
Ensembl chr15:83,703,791...83,722,921
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 NOT ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 9:46,657,444...46,782,545
Ensembl chr 9:46,657,575...46,782,545
JBrowse link
G Mink1 misshapen-like kinase 1 NOT ISO (PMID:22797597) RGD PMID:22797597 NCBI chr10:57,185,310...57,238,531
Ensembl chr10:57,185,347...57,238,531
JBrowse link
G Myo1a myosin IA IEA
ISO
GO_REF:0000107
MGI:3587749 (MGI:3587467|PMID:15758024)
Ensembl
RGD
PMID:15758024 GO_REF:0000107, MGI:3587467 NCBI chr 7:71,000,299...71,019,386
Ensembl chr 7:71,004,417...71,019,372
JBrowse link
G Pls1 plastin 1 NOT ISO UniProtKB:P26040|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family NOT ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family NOT ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 7:60,850,406...60,878,226
Ensembl chr 7:60,853,930...60,860,990
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family ISO (PMID:22797597) RGD PMID:22797597 NCBI chr15:105,851,543...105,852,033
Ensembl chr15:105,851,542...105,878,666
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family NOT ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 2:151,685,251...151,685,802
Ensembl chr 2:151,685,251...151,685,802
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family NOT ISO (PMID:22797597) RGD PMID:22797597 NCBI chr  X:138,224,039...138,237,157
Ensembl chr  X:138,224,040...138,237,157
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 IEA
ISO
GO_REF:0000107
UniProtKB:Q8TEU7 (PMID:22797597)
Ensembl
RGD
PMID:22797597 GO_REF:0000107 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Rapgef6 Rap guanine nucleotide exchange factor 6 ISO UniProtKB:Q9Y4G8 (PMID:22797597) RGD PMID:22797597 NCBI chr10:39,875,322...40,039,929
Ensembl chr10:39,875,371...40,039,929
JBrowse link
G Rdx radixin ISO MGI:2671151 (MGI:2181857|PMID:12068294) RGD PMID:12068294 MGI:2181857 NCBI chr 8:56,570,728...56,612,851
Ensembl chr 8:56,585,396...56,610,612
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (PMID:20937695) RGD PMID:20937695 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Stk26 serine/threonine kinase 26 ISO (PMID:22797597) RGD PMID:22797597 NCBI chr  X:138,032,356...138,096,632
Ensembl chr  X:138,046,494...138,096,669
JBrowse link
G Stx2 syntaxin 2 IDA RGD PMID:12464668 RGD:1298909 NCBI chr12:31,324,203...31,360,249
Ensembl chr12:31,335,372...31,360,254
JBrowse link
G Tnik TRAF2 and NCK interacting kinase ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 2:113,984,599...114,391,805
Ensembl chr 2:113,984,646...114,384,894
JBrowse link
G Vil1 villin 1 NOT ISO UniProtKB:P26040|UniProtKB:Q3V0K9 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link
negative regulation of microvillus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rap1gap Rap1 GTPase-activating protein ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 5:156,008,868...156,074,350
Ensembl chr 5:156,026,911...156,074,395
JBrowse link
regulation of microvillus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8b1 ATPase phospholipid transporting 8B1 ISO (PMID:20512993) RGD PMID:20512993 NCBI chr18:60,013,388...60,152,920
Ensembl chr18:60,013,382...60,095,354
JBrowse link
G Fscn1 fascin actin-bundling protein 1 ISO
IEA
ISS
(PMID:9571235)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9571235 GO_REF:0000024, GO_REF:0000107 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IMP RGD PMID:17178913 RGD:2301840 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Klf5 Kruppel-like factor 5 ISO MGI:3806635 (MGI:5471906|PMID:23266329) RGD PMID:23266329 MGI:5471906 NCBI chr15:83,703,796...83,722,921
Ensembl chr15:83,703,791...83,722,921
JBrowse link
G Pld1 phospholipase D1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:22797597)
Ensembl
RGD
PMID:22797597, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:113,651,967...113,849,403
Ensembl chr 2:113,652,348...113,849,403
JBrowse link
G Podxl podocalyxin-like ISS
ISO
IBA
GO_REF:0000024
(MGI:4456941|PMID:17311105)
PMID:21873635
UniProt
RGD
PMID:17311105, PMID:21873635 GO_REF:0000024, MGI:4456941, RGD:13792537 NCBI chr 4:58,829,049...58,893,353
Ensembl chr 4:58,829,060...58,893,170
JBrowse link
regulation of microvillus length term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr2 cadherin-related family member 2 ISO (PMID:24725409) RGD PMID:24725409 NCBI chr17:10,415,044...10,450,589
Ensembl chr17:10,415,123...10,439,691
JBrowse link
G Cdhr5 cadherin-related family member 5 ISO
ISS
(PMID:24725409)
GO_REF:0000024
RGD
UniProt
PMID:24725409 GO_REF:0000024 NCBI chr 1:214,255,118...214,263,848
Ensembl chr 1:214,255,110...214,263,581
JBrowse link
G Ezr ezrin ISO UniProtKB:Q3V0K9|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Pls1 plastin 1 ISO UniProtKB:P26040|UniProtKB:Q62468 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link
G Ush1c USH1 protein network component harmonin ISO (MGI:5578666|PMID:24725409) RGD PMID:24725409 MGI:5578666 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Vil1 villin 1 ISO UniProtKB:P26040|UniProtKB:Q3V0K9 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular component organization or biogenesis 6789
        cellular component organization 6534
          cell projection organization 1730
            plasma membrane bounded cell projection organization 1692
              microvillus organization 31
                follicle cell microvillus organization + 0
                microvillus assembly + 26
                regulation of microvillus organization + 13
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.