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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of interferon-beta production
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Accession:GO:0032728 term browser browse the term
Definition:Any process that activates or increases the frequency, rate, or extent of interferon-beta production.
Synonyms:exact_synonym: positive regulation of IFN-beta production;   up regulation of interferon-beta production;   upregulation of interferon-beta production
 narrow_synonym: activation of interferon-beta production;   positive regulation of interferon-beta biosynthetic process;   positive regulation of interferon-beta secretion;   stimulation of interferon-beta production
 alt_id: GO:0035549;   GO:0045359


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positive regulation of interferon-beta production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:27980081), (PMID:31575075) RGD PMID:27980081, PMID:31575075 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Ddx58 DEXD/H-box helicase 58 ISO
IBA
(MGI:MGI:5318026|PMID:17942531)
(PMID:17079289), (PMID:19211564), (PMID:19609254), (PMID:19631370), (PMID:21957149)
PMID:21873635
RGD PMID:17079289, PMID:17942531, PMID:19211564, PMID:19609254, PMID:19631370, PMID:21957149, PMID:21873635 MGI:MGI:5318026, RGD:13792537 NCBI chr 5:56,486,584...56,536,898
Ensembl chr 5:56,500,734...56,536,772
JBrowse link
G Dhx58 DEXH-box helicase 58 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:88,599,722...88,611,562
Ensembl chr10:88,599,680...88,611,105
JBrowse link
G Dhx9 DExH-box helicase 9 ISO
IEA
(PMID:21957149)
GO_REF:0000107
RGD
Ensembl
PMID:21957149 GO_REF:0000107 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Flot1 flotillin 1 ISO (PMID:25204797) RGD PMID:25204797 NCBI chr20:3,427,890...3,438,418
Ensembl chr20:3,427,880...3,438,396
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:4367121|PMID:19890330) RGD PMID:19890330 MGI:MGI:4367121 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb2 high mobility group box 2 ISO (MGI:MGI:4367121|PMID:19890330) RGD PMID:19890330 MGI:MGI:4367121 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 IBA
ISO
PMID:21873635
(PMID:17600090), (PMID:19211564), (PMID:19656871), (PMID:21957149)
RGD PMID:17600090, PMID:19211564, PMID:19656871, PMID:21957149, PMID:21873635 RGD:13792537 NCBI chr 3:48,557,696...48,604,097
Ensembl chr 3:48,557,696...48,604,097
JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 ISO (MGI:MGI:5619426|PMID:24598055) RGD PMID:24598055 MGI:MGI:5619426 NCBI chr11:31,640,407...31,666,839
Ensembl chr11:31,640,407...31,664,061
JBrowse link
G Irf1 interferon regulatory factor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21389130)
Ensembl
UniProt
RGD
PMID:21389130 GO_REF:0000024, GO_REF:0000107 NCBI chr10:39,109,530...39,116,532
Ensembl chr10:39,109,522...39,116,531
JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:4365354|PMID:18562536) RGD PMID:18562536 MGI:MGI:4365354 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198
JBrowse link
G Irf7 interferon regulatory factor 7 ISO (PMID:22065573) RGD PMID:22065573 NCBI chr 1:214,249,388...214,252,909
Ensembl chr 1:214,248,837...214,252,456
JBrowse link
G Mavs mitochondrial antiviral signaling protein ISS
ISO
GO_REF:0000024
(PMID:16127453), (PMID:19609254), (PMID:19631370), (PMID:21957149)
UniProt
RGD
PMID:16127453, PMID:19609254, PMID:19631370, PMID:21957149 GO_REF:0000024 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567
JBrowse link
G Polr3a RNA polymerase III subunit A ISO (PMID:19609254) RGD PMID:19609254 NCBI chr16:717,821...756,002
Ensembl chr16:716,683...755,990
JBrowse link
G Polr3b RNA polymerase III subunit B ISO (PMID:19609254) RGD PMID:19609254 NCBI chr 7:24,745,051...24,851,227
Ensembl chr 7:24,745,051...24,851,227
JBrowse link
G Polr3c RNA polymerase III subunit C ISO
ISS
(PMID:19609254)
GO_REF:0000024
RGD
UniProt
PMID:19609254 GO_REF:0000024 NCBI chr 2:198,836,282...198,852,368
Ensembl chr 2:198,836,285...198,852,161
JBrowse link
G Polr3d RNA polymerase III subunit D ISO (PMID:19631370) RGD PMID:19631370 NCBI chr15:52,129,471...52,134,140
Ensembl chr15:52,129,471...52,134,140
JBrowse link
G Polr3f RNA polymerase III subunit F ISO (PMID:19631370) RGD PMID:19631370 NCBI chr 3:138,684,685...138,701,055
Ensembl chr 3:138,684,685...138,701,055
JBrowse link
G Polr3g RNA polymerase III subunit G ISO (PMID:19609254), (PMID:19631370) RGD PMID:19609254, PMID:19631370 NCBI chr 2:9,537,642...9,578,551
Ensembl chr 2:9,537,642...9,578,310
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO (MGI:MGI:3760575|PMID:17954568) RGD PMID:17954568 MGI:MGI:3760575 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 ISO
IEA
(MGI:MGI:5562517|PMID:23871208)
GO_REF:0000107
RGD
Ensembl
PMID:23871208 GO_REF:0000107, MGI:MGI:5562517 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348
JBrowse link
G Riok3 RIO kinase 3 ISO (PMID:24807708) RGD PMID:24807708 NCBI chr18:3,565,166...3,590,739
Ensembl chr18:3,565,166...3,590,739
JBrowse link
G Rnf135 ring finger protein 135 ISO
ISS
(PMID:19017631)
GO_REF:0000024
RGD
UniProt
PMID:19017631 GO_REF:0000024 NCBI chr10:67,531,989...67,551,237 JBrowse link
G Tbk1 TANK-binding kinase 1 ISO (PMID:16127453)
MGI:MGI:3046789 (MGI:MGI:3530402|PMID:15661922)
RGD PMID:15661922, PMID:16127453 MGI:MGI:3530402 NCBI chr 7:63,655,247...63,687,978
Ensembl chr 7:63,655,247...63,687,978
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 ISO MGI:MGI:2679794|MGI:MGI:3029019 (MGI:MGI:2669022|PMID:12855817), (MGI:MGI:2670551|PMID:12872135) RGD PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chr 9:10,780,185...10,790,280 JBrowse link
G Tlr2 toll-like receptor 2 ISO (MGI:MGI:4456948|PMID:15356140) RGD PMID:15356140 MGI:MGI:4456948 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr3 toll-like receptor 3 ISO (MGI:MGI:4456948|PMID:15356140)
(PMID:12054664), (PMID:16286015)
RGD PMID:12054664, PMID:15356140, PMID:16286015 MGI:MGI:4456948 NCBI chr16:50,016,466...50,031,011
Ensembl chr16:50,016,857...50,031,214
JBrowse link
G Tlr4 toll-like receptor 4 ISO
IEA
MGI:MGI:1860885 (MGI:MGI:3530402|PMID:15661922), (MGI:MGI:4456948|PMID:15356140)
GO_REF:0000107
RGD
Ensembl
PMID:15356140, PMID:15661922 GO_REF:0000107, MGI:MGI:3530402, MGI:MGI:4456948 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tlr7 toll-like receptor 7 ISO
IEA
(PMID:16286015)
GO_REF:0000107
RGD
Ensembl
PMID:16286015 GO_REF:0000107 NCBI chr  X:28,486,836...28,513,004
Ensembl chr  X:28,486,869...28,512,957
JBrowse link
G Tlr8 toll-like receptor 8 ISO
IEA
(PMID:16286015)
GO_REF:0000107
RGD
Ensembl
PMID:16286015 GO_REF:0000107 NCBI chr  X:28,539,158...28,562,803
Ensembl chr  X:28,539,158...28,562,803
JBrowse link
G Tlr9 toll-like receptor 9 ISO (MGI:MGI:4456948|PMID:15356140)
(PMID:16286015)
RGD PMID:15356140, PMID:16286015 MGI:MGI:4456948 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5619432|PMID:23776228) RGD PMID:23776228 MGI:MGI:5619432 NCBI chr11:62,014,925...62,561,113
Ensembl chr11:62,014,925...62,451,184
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21102435) RGD PMID:21102435 NCBI chr 4:66,012,111...66,062,160
Ensembl chr 4:66,011,915...66,062,089
JBrowse link
G Zfp64 zinc finger protein 64 ISO (MGI:MGI:5619431|PMID:23857586) RGD PMID:23857586 MGI:MGI:5619431 NCBI chr 3:165,713,070...165,741,932
Ensembl chr 3:165,713,020...165,741,967
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    multicellular organismal process 9055
      cytokine production 846
        type I interferon production 91
          positive regulation of type I interferon production 54
            positive regulation of interferon-beta production 34
Path 2
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      organic substance metabolic process 11636
        macromolecule metabolic process 10081
          gene expression 6295
            cytokine production 846
              regulation of cytokine production 762
                positive regulation of cytokine production 503
                  positive regulation of type I interferon production 54
                    positive regulation of interferon-beta production 34
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.