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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of interferon-beta production
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Accession:GO:0032728 term browser browse the term
Definition:Any process that activates or increases the frequency, rate, or extent of interferon-beta production.
Synonyms:exact_synonym: positive regulation of IFN-beta production;   up regulation of interferon-beta production;   upregulation of interferon-beta production
 narrow_synonym: activation of interferon-beta production;   positive regulation of interferon-beta biosynthetic process;   positive regulation of interferon-beta secretion;   stimulation of interferon-beta production
 alt_id: GO:0035549;   GO:0045359


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positive regulation of interferon-beta production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX3X DEAD-box helicase 3 X-linked ISO (PMID:27980081), (PMID:31575075) UniProt PMID:27980081, PMID:31575075 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837
JBrowse link
G DDX58 DExD/H-box helicase 58 ISO (MGI:MGI:5318026|PMID:17942531)
(PMID:19211564), (PMID:19609254), (PMID:19631370), (PMID:21957149)
(PMID:17079289)
UniProtKB
UniProt
BHF-UCL
PMID:17079289, PMID:17942531, PMID:19211564, PMID:19609254, PMID:19631370, PMID:21957149 MGI:MGI:5318026 NCBI chr 9:32,230,012...32,302,159
Ensembl chr 9:33,040,000...33,110,557
JBrowse link
G DHX9 DExH-box helicase 9 ISO (PMID:21957149) UniProt PMID:21957149 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833
JBrowse link
G FLOT1 flotillin 1 ISO (PMID:25204797) UniProtKB PMID:25204797 NCBI chr 6:30,472,839...30,487,809
Ensembl chr 6:31,342,033...31,357,559
JBrowse link
G HMGB1 high mobility group box 1 ISO (MGI:MGI:4367121|PMID:19890330) UniProt PMID:19890330 MGI:MGI:4367121 NCBI chr13:11,737,942...11,894,923 JBrowse link
G HMGB2 high mobility group box 2 ISO (MGI:MGI:4367121|PMID:19890330) UniProtKB PMID:19890330 MGI:MGI:4367121 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 ISO (PMID:17600090)
(PMID:19211564), (PMID:19656871), (PMID:21957149)
UniProtKB
UniProt
PMID:17600090, PMID:19211564, PMID:19656871, PMID:21957149 NCBI chr2B:49,560,620...49,612,086
Ensembl chr2B:166,928,994...166,980,170
JBrowse link
G IFNAR1 interferon alpha and beta receptor subunit 1 ISO (MGI:MGI:5619426|PMID:24598055) CACAO PMID:24598055 MGI:MGI:5619426 NCBI chr21:19,683,496...19,719,034
Ensembl chr21:33,058,396...33,093,824
JBrowse link
G IRF1 interferon regulatory factor 1 ISO (PMID:21389130) UniProtKB PMID:21389130 NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035
JBrowse link
G IRF3 interferon regulatory factor 3 ISO (MGI:MGI:4365354|PMID:18562536) UniProtKB PMID:18562536 MGI:MGI:4365354 NCBI chr19:46,674,193...46,680,464
Ensembl chr19:55,593,627...55,599,903
JBrowse link
G MAVS mitochondrial antiviral signaling protein ISO (PMID:16127453)
(PMID:19609254), (PMID:19631370), (PMID:21957149)
BHF-UCL
UniProt
PMID:16127453, PMID:19609254, PMID:19631370, PMID:21957149 NCBI chr20:3,885,044...3,903,554
Ensembl chr20:3,659,559...3,701,089
JBrowse link
G POLR3A RNA polymerase III subunit A ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chr10:74,496,121...74,550,054 JBrowse link
G POLR3B RNA polymerase III subunit B ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chr12:103,936,650...104,083,470
Ensembl chr12:107,330,306...107,477,279
JBrowse link
G POLR3C RNA polymerase III subunit C ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chr 1:121,917,371...121,935,976
Ensembl chr 1:113,733,846...113,752,486
JBrowse link
G POLR3D RNA polymerase III subunit D ISO (PMID:19631370) UniProtKB PMID:19631370 NCBI chr 8:21,489,492...21,499,948
Ensembl chr 8:18,429,013...18,435,060
JBrowse link
G POLR3F RNA polymerase III subunit F ISO (PMID:19631370) UniProtKB PMID:19631370 NCBI chr20:18,429,402...18,447,634
Ensembl chr20:18,400,976...18,418,225
JBrowse link
G POLR3G RNA polymerase III subunit G ISO (PMID:19609254), (PMID:19631370) UniProtKB PMID:19609254, PMID:19631370 NCBI chr 5:24,855,517...24,896,051
Ensembl chr 5:24,992,158...25,019,272
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 ISO (MGI:MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:MGI:3760575 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 ISO (MGI:MGI:5562517|PMID:23871208) UniProt PMID:23871208 MGI:MGI:5562517 NCBI chr 1:88,685,736...88,743,164
Ensembl chr 1:123,734,511...123,790,830
JBrowse link
G RIOK3 RIO kinase 3 ISO (PMID:24807708) UniProtKB PMID:24807708 NCBI chr18:16,703,893...16,734,160
Ensembl chr18:20,331,222...20,360,825
JBrowse link
G RNF135 ring finger protein 135 ISO (PMID:19017631) UniProtKB PMID:19017631 NCBI chr17:25,843,447...25,869,874 JBrowse link
G TBK1 TANK binding kinase 1 ISO (PMID:16127453)
(MGI:MGI:3530402|PMID:15661922)
BHF-UCL
MGI
PMID:15661922, PMID:16127453 MGI:MGI:3530402 NCBI chr12:24,419,271...24,469,164
Ensembl chr12:24,917,246...24,968,587
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 ISO (MGI:MGI:2670551|PMID:12872135)
(MGI:MGI:2669022|PMID:12855817)
MGI PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chr19:3,836,100...3,852,017
Ensembl chr19:4,787,557...4,790,206
JBrowse link
G TLR2 toll like receptor 2 ISO (MGI:MGI:4456948|PMID:15356140) BHF-UCL PMID:15356140 MGI:MGI:4456948 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G TLR3 toll like receptor 3 ISO (MGI:MGI:4456948|PMID:15356140)
(PMID:12054664)
(PMID:16286015)
BHF-UCL
UniProt
PMID:12054664, PMID:15356140, PMID:16286015 MGI:MGI:4456948 NCBI chr 4:178,238,352...178,256,264
Ensembl chr 4:190,446,487...190,462,728
JBrowse link
G TLR4 toll like receptor 4 ISO (MGI:MGI:4456948|PMID:15356140)
(MGI:MGI:3530402|PMID:15661922)
BHF-UCL
MGI
PMID:15356140, PMID:15661922 MGI:MGI:3530402, MGI:MGI:4456948 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TLR7 toll like receptor 7 ISO (PMID:16286015) UniProt PMID:16286015 NCBI chr  X:5,479,247...5,504,810
Ensembl chr  X:12,767,981...12,790,517
JBrowse link
G TLR8 toll like receptor 8 ISO (PMID:16286015) UniProt PMID:16286015 NCBI chr  X:5,518,742...5,535,304 JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5619432|PMID:23776228) CACAO PMID:23776228 MGI:MGI:5619432 NCBI chr 3:111,445,520...112,275,946
Ensembl chr 3:118,389,250...118,431,453
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21102435) UniProtKB PMID:21102435 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438
JBrowse link
G ZFP64 ZFP64 zinc finger protein ISO (MGI:MGI:5619431|PMID:23857586) CACAO PMID:23857586 MGI:MGI:5619431 NCBI chr20:48,430,392...48,535,618
Ensembl chr20:49,516,786...49,653,435
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12561
    multicellular organismal process 6470
      cytokine production 701
        type I interferon production 83
          positive regulation of type I interferon production 51
            positive regulation of interferon-beta production 31
Path 2
Term Annotations click to browse term
  biological_process 12561
    metabolic process 7977
      organic substance metabolic process 7668
        macromolecule metabolic process 6621
          gene expression 4111
            cytokine production 701
              regulation of cytokine production 689
                positive regulation of cytokine production 439
                  positive regulation of type I interferon production 51
                    positive regulation of interferon-beta production 31
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.