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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of interferon-beta production
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Accession:GO:0032728 term browser browse the term
Definition:Any process that activates or increases the frequency, rate, or extent of interferon-beta production.
Synonyms:exact_synonym: positive regulation of IFN-beta production;   up regulation of interferon-beta production;   upregulation of interferon-beta production
 narrow_synonym: activation of interferon-beta production;   positive regulation of interferon-beta biosynthetic process;   positive regulation of interferon-beta secretion;   stimulation of interferon-beta production
 alt_id: GO:0035549;   GO:0045359


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positive regulation of interferon-beta production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked ISO (PMID:27980081), (PMID:31575075) UniProt PMID:27980081, PMID:31575075 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Ddx58 DExD/H-box helicase 58 ISO (MGI:MGI:5318026|PMID:17942531)
(PMID:19211564), (PMID:19609254), (PMID:19631370), (PMID:21957149)
(PMID:17079289)
UniProtKB
UniProt
BHF-UCL
PMID:17079289, PMID:17942531, PMID:19211564, PMID:19609254, PMID:19631370, PMID:21957149 MGI:MGI:5318026 NCBI chrNW_004955472:3,093,895...3,135,524
Ensembl chrNW_004955472:3,093,939...3,133,987
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:21957149) UniProt PMID:21957149 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Flot1 flotillin 1 ISO (PMID:25204797) UniProtKB PMID:25204797 NCBI chrNW_004955583:717,246...729,924
Ensembl chrNW_004955583:713,560...729,924
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:4367121|PMID:19890330) UniProt PMID:19890330 MGI:MGI:4367121 NCBI chrNW_004955431:15,373,207...15,377,339 JBrowse link
G Hmgb2 high mobility group box 2 ISO (MGI:MGI:4367121|PMID:19890330) UniProtKB PMID:19890330 MGI:MGI:4367121 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 ISO (PMID:17600090)
(PMID:19211564), (PMID:19656871), (PMID:21957149)
UniProtKB
UniProt
PMID:17600090, PMID:19211564, PMID:19656871, PMID:21957149 NCBI chrNW_004955449:11,538,869...11,596,502
Ensembl chrNW_004955449:11,538,889...11,593,349
JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 ISO (MGI:MGI:5619426|PMID:24598055) CACAO PMID:24598055 MGI:MGI:5619426 NCBI chrNW_004955407:32,730,973...32,755,404
Ensembl chrNW_004955407:32,730,953...32,754,651
JBrowse link
G Irf1 interferon regulatory factor 1 ISO (PMID:21389130) UniProtKB PMID:21389130 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973
JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:4365354|PMID:18562536) UniProtKB PMID:18562536 MGI:MGI:4365354 NCBI chrNW_004955559:1,223,986...1,228,671
Ensembl chrNW_004955559:1,224,874...1,228,624
JBrowse link
G Irf7 interferon regulatory factor 7 ISO (PMID:22065573) CACAO PMID:22065573 NCBI chrNW_004955476:11,442,781...11,445,706
Ensembl chrNW_004955476:11,443,272...11,445,657
JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:16127453)
(PMID:19609254), (PMID:19631370), (PMID:21957149)
BHF-UCL
UniProt
PMID:16127453, PMID:19609254, PMID:19631370, PMID:21957149 NCBI chrNW_004955415:14,691,918...14,704,782
Ensembl chrNW_004955415:14,695,438...14,703,672
JBrowse link
G Polr3a RNA polymerase III subunit A ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chrNW_004955437:14,446,059...14,483,336
Ensembl chrNW_004955437:14,446,024...14,483,336
JBrowse link
G Polr3b RNA polymerase III subunit B ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chrNW_004955405:40,353,289...40,451,445
Ensembl chrNW_004955405:40,353,281...40,451,479
JBrowse link
G Polr3c RNA polymerase III subunit C ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chrNW_004955568:242,834...263,053
Ensembl chrNW_004955568:243,073...261,418
JBrowse link
G Polr3d RNA polymerase III subunit D ISO (PMID:19631370) UniProtKB PMID:19631370 NCBI chrNW_004955403:45,721,266...45,727,214
Ensembl chrNW_004955403:45,721,266...45,727,214
JBrowse link
G Polr3f RNA polymerase III subunit F ISO (PMID:19631370) UniProtKB PMID:19631370 NCBI chrNW_004955415:27,022,081...27,036,475
Ensembl chrNW_004955415:27,022,081...27,036,475
JBrowse link
G Polr3g RNA polymerase III subunit G ISO (PMID:19609254), (PMID:19631370) UniProtKB PMID:19609254, PMID:19631370 NCBI chrNW_004955418:21,116,812...21,149,818 JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO (MGI:MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:MGI:3760575 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203
JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 ISO (MGI:MGI:5562517|PMID:23871208) UniProt PMID:23871208 MGI:MGI:5562517 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Riok3 RIO kinase 3 ISO (PMID:24807708) UniProtKB PMID:24807708 NCBI chrNW_004955402:11,649,160...11,670,010
Ensembl chrNW_004955402:11,648,849...11,672,545
JBrowse link
G Rnf135 ring finger protein 135 ISO (PMID:19017631) UniProtKB PMID:19017631 NCBI chrNW_004955481:7,111,760...7,122,800 JBrowse link
G Tbk1 TANK binding kinase 1 ISO (PMID:16127453)
(MGI:MGI:3530402|PMID:15661922)
BHF-UCL
MGI
PMID:15661922, PMID:16127453 MGI:MGI:3530402 NCBI chrNW_004955458:11,210,120...11,263,632
Ensembl chrNW_004955458:11,211,398...11,263,867
JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 ISO (MGI:MGI:2669022|PMID:12855817)
(MGI:MGI:2670551|PMID:12872135)
MGI PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513
JBrowse link
G Tlr2 toll like receptor 2 ISO (MGI:MGI:4456948|PMID:15356140) BHF-UCL PMID:15356140 MGI:MGI:4456948 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
G Tlr3 toll like receptor 3 ISO (MGI:MGI:4456948|PMID:15356140)
(PMID:16286015)
(PMID:12054664)
BHF-UCL
UniProt
PMID:12054664, PMID:15356140, PMID:16286015 MGI:MGI:4456948 NCBI chrNW_004955403:22,977,882...23,001,392
Ensembl chrNW_004955403:22,979,120...23,001,467
JBrowse link
G Tlr4 toll like receptor 4 ISO (MGI:MGI:4456948|PMID:15356140)
(MGI:MGI:3530402|PMID:15661922)
BHF-UCL
MGI
PMID:15356140, PMID:15661922 MGI:MGI:3530402, MGI:MGI:4456948 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Tlr7 toll like receptor 7 ISO (PMID:16286015) UniProt PMID:16286015 NCBI chrNW_004955544:424,897...443,562
Ensembl chrNW_004955544:424,850...443,564
JBrowse link
G Tlr8 toll like receptor 8 ISO (PMID:16286015) UniProt PMID:16286015 NCBI chrNW_004955544:302,027...317,110
Ensembl chrNW_004955544:303,319...306,426
JBrowse link
G Tlr9 toll like receptor 9 ISO (MGI:MGI:4456948|PMID:15356140)
(PMID:16286015)
BHF-UCL
UniProt
PMID:15356140, PMID:16286015 MGI:MGI:4456948 NCBI chrNW_004955532:3,828,645...3,832,699 JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5619432|PMID:23776228) CACAO PMID:23776228 MGI:MGI:5619432 NCBI chrNW_004955427:14,409,700...15,231,495
Ensembl chrNW_004955427:14,409,700...14,453,926
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21102435) UniProtKB PMID:21102435 NCBI chrNW_004955494:3,925,478...3,985,469
Ensembl chrNW_004955494:3,926,413...3,983,736
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    multicellular organismal process 6189
      cytokine production 710
        type I interferon production 87
          positive regulation of type I interferon production 51
            positive regulation of interferon-beta production 32
Path 2
Term Annotations click to browse term
  biological_process 11892
    metabolic process 7610
      organic substance metabolic process 7321
        macromolecule metabolic process 6351
          gene expression 3919
            cytokine production 710
              regulation of cytokine production 631
                positive regulation of cytokine production 398
                  positive regulation of type I interferon production 51
                    positive regulation of interferon-beta production 32
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.