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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of interferon-beta production
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Accession:GO:0032728 term browser browse the term
Definition:Any process that activates or increases the frequency, rate, or extent of interferon-beta production.
Synonyms:exact_synonym: positive regulation of IFN-beta production;   up regulation of interferon-beta production;   upregulation of interferon-beta production
 narrow_synonym: activation of interferon-beta production;   positive regulation of interferon-beta biosynthetic process;   positive regulation of interferon-beta secretion;   stimulation of interferon-beta production
 alt_id: GO:0035549;   GO:0045359


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positive regulation of interferon-beta production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX3X DEAD-box helicase 3 X-linked IEA Ensembl GO_REF:0000107 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774
JBrowse link
G DDX58 DExD/H-box helicase 58 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:49,764,252...49,799,626
Ensembl chr11:49,764,267...49,799,527
JBrowse link
G DHX58 DExH-box helicase 58 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:20,787,470...20,795,593
Ensembl chr 9:20,787,541...20,795,361
JBrowse link
G DHX9 DExH-box helicase 9 IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618
JBrowse link
G FAM149A family with sequence similarity 149 member A IEA Ensembl GO_REF:0000107 NCBI chr16:44,550,726...44,603,466
Ensembl chr16:44,550,846...44,653,247
JBrowse link
G FLOT1 flotillin 1 IEA Ensembl GO_REF:0000107 NCBI chr12:517,941...528,677
Ensembl chr12:516,032...528,637
JBrowse link
G HMGB1 high mobility group box 1 IEA Ensembl GO_REF:0000107 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
JBrowse link
G HMGB2 high mobility group box 2 IEA Ensembl GO_REF:0000107 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr36:7,668,925...7,727,040
Ensembl chr36:7,649,727...8,261,048
JBrowse link
G IRF1 interferon regulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr11:20,773,801...20,781,106
Ensembl chr11:20,760,120...20,781,608
JBrowse link
G IRF3 interferon regulatory factor 3 ISO (MGI:MGI:4365354|PMID:18562536) UniProtKB PMID:18562536 MGI:MGI:4365354 NCBI chr 1:106,875,016...106,879,065
Ensembl chr 1:106,875,118...106,879,065
JBrowse link
G LOC609830 interferon alpha/beta receptor 1 ISO (MGI:MGI:5619426|PMID:24598055) CACAO PMID:24598055 MGI:MGI:5619426 NCBI chr31:28,854,765...28,876,399 JBrowse link
G MAVS mitochondrial antiviral signaling protein IEA Ensembl GO_REF:0000107 NCBI chr24:17,510,209...17,529,286
Ensembl chr24:17,512,761...17,523,807
JBrowse link
G POLR3A RNA polymerase III subunit A IEA Ensembl GO_REF:0000107 NCBI chr 4:27,834,197...27,883,065
Ensembl chr 4:27,835,612...27,883,436
JBrowse link
G POLR3B RNA polymerase III subunit B IEA Ensembl GO_REF:0000107 NCBI chr10:32,202,188...32,309,775
Ensembl chr10:32,202,190...32,309,614
JBrowse link
G POLR3C RNA polymerase III subunit C IEA Ensembl GO_REF:0000107 NCBI chr17:58,634,299...58,646,056
Ensembl chr17:58,636,244...58,645,838
JBrowse link
G POLR3D RNA polymerase III subunit D IEA Ensembl GO_REF:0000107 NCBI chr25:35,011,189...35,016,617
Ensembl chr25:35,011,861...35,016,605
JBrowse link
G POLR3F RNA polymerase III subunit F IEA Ensembl GO_REF:0000107 NCBI chr24:4,715,146...4,727,938
Ensembl chr24:4,663,302...4,727,920
JBrowse link
G POLR3G RNA polymerase III subunit G ISO (PMID:19609254), (PMID:19631370) UniProtKB PMID:19609254, PMID:19631370 NCBI chr 3:18,426,169...18,529,304
Ensembl chr 3:18,427,985...18,467,801
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 IEA Ensembl GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 IEA Ensembl GO_REF:0000107 NCBI chr17:51,623,628...51,683,039
Ensembl chr17:51,623,623...51,682,858
JBrowse link
G RIOK3 RIO kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:64,835,810...64,860,464
Ensembl chr 7:64,837,233...64,860,393
JBrowse link
G RNF135 ring finger protein 135 IEA Ensembl GO_REF:0000107 NCBI chr 9:40,794,772...40,809,022
Ensembl chr 9:40,795,297...40,808,737
JBrowse link
G TBK1 TANK binding kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr10:7,169,664...7,208,890
Ensembl chr10:7,168,007...7,208,899
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 ISO (MGI:MGI:2669022|PMID:12855817)
(MGI:MGI:2670551|PMID:12872135)
MGI PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chr20:54,948,237...54,961,996
Ensembl chr20:54,959,525...54,961,780
JBrowse link
G TLR2 toll like receptor 2 ISO (MGI:MGI:4456948|PMID:15356140) BHF-UCL PMID:15356140 MGI:MGI:4456948 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
G TLR3 toll like receptor 3 IEA Ensembl GO_REF:0000107 NCBI chr16:44,617,012...44,633,591
Ensembl chr16:44,550,846...44,653,247
JBrowse link
G TLR4 toll like receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165
JBrowse link
G TLR7 toll like receptor 7 IEA Ensembl GO_REF:0000107 NCBI chr  X:9,331,243...9,360,461
Ensembl chr  X:9,314,815...9,359,603
JBrowse link
G TLR8 toll like receptor 8 ISO (PMID:16286015) UniProt PMID:16286015 NCBI chr  X:9,381,159...9,399,938 JBrowse link
G TLR9 toll like receptor 9 ISS UniProt GO_REF:0000024 NCBI chr20:37,529,322...37,547,117
Ensembl chr20:37,542,340...37,547,114
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 IEA Ensembl GO_REF:0000107 NCBI chr33:18,860,824...19,277,691
Ensembl chr33:18,529,132...18,759,058
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21102435) UniProtKB PMID:21102435 NCBI chr16:9,598,339...9,660,540
Ensembl chr16:9,598,405...9,664,569
JBrowse link
G ZFP64 ZFP64 zinc finger protein ISO (MGI:MGI:5619431|PMID:23857586) CACAO PMID:23857586 MGI:MGI:5619431 NCBI chr24:38,201,824...38,289,395
Ensembl chr24:38,203,028...38,289,580
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    multicellular organismal process 7627
      cytokine production 788
        type I interferon production 90
          positive regulation of type I interferon production 52
            positive regulation of interferon-beta production 34
Path 2
Term Annotations click to browse term
  biological_process 16187
    metabolic process 10657
      organic substance metabolic process 10135
        macromolecule metabolic process 8801
          gene expression 5403
            cytokine production 788
              regulation of cytokine production 703
                positive regulation of cytokine production 441
                  positive regulation of type I interferon production 52
                    positive regulation of interferon-beta production 34
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.