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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of interferon-beta production
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Accession:GO:0032728 term browser browse the term
Definition:Any process that activates or increases the frequency, rate, or extent of interferon-beta production.
Synonyms:exact_synonym: positive regulation of IFN-beta production;   up regulation of interferon-beta production;   upregulation of interferon-beta production
 narrow_synonym: activation of interferon-beta production;   positive regulation of interferon-beta biosynthetic process;   positive regulation of interferon-beta secretion;   stimulation of interferon-beta production
 alt_id: GO:0035549;   GO:0045359


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positive regulation of interferon-beta production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD box helicase 3, X-linked ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:13,280,496...13,293,988
Ensembl chr  X:13,280,970...13,294,052
JBrowse link
G Ddx58 DEAD/H box helicase 58 IMP
IBA
ISO
(MGI:MGI:5318026|PMID:17942531)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
MGI
PMID:17942531, PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5318026, MGI:MGI:6201960 NCBI chr 4:40,203,777...40,239,825
Ensembl chr 4:40,203,773...40,239,828
JBrowse link
G Dhx58 DEXH (Asp-Glu-X-His) box polypeptide 58 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr11:100,694,884...100,704,271
Ensembl chr11:100,694,884...100,704,271
JBrowse link
G Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:153,455,756...153,487,688
Ensembl chr 1:153,455,758...153,487,660
JBrowse link
G Flot1 flotillin 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:35,823,320...35,832,789
Ensembl chr17:35,823,230...35,832,791
JBrowse link
G Hmgb1 high mobility group box 1 IMP (MGI:MGI:4367121|PMID:19890330) UniProt PMID:19890330 MGI:MGI:4367121 NCBI chr 5:149,046,702...149,053,057
Ensembl chr 5:149,046,702...149,184,489
JBrowse link
G Hmgb2 high mobility group box 2 IMP (MGI:MGI:4367121|PMID:19890330) UniProtKB PMID:19890330 MGI:MGI:4367121 NCBI chr 8:57,511,843...57,515,999
Ensembl chr 8:57,511,907...57,515,999
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 2:62,595,618...62,646,255
Ensembl chr 2:62,595,798...62,646,255
JBrowse link
G Ifnar1 interferon (alpha and beta) receptor 1 IMP (MGI:MGI:5619426|PMID:24598055) CACAO PMID:24598055 MGI:MGI:5619426 NCBI chr16:91,485,032...91,510,523
Ensembl chr16:91,485,238...91,507,441
JBrowse link
G Irf1 interferon regulatory factor 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:53,770,014...53,778,374
Ensembl chr11:53,770,014...53,778,374
JBrowse link
G Irf3 interferon regulatory factor 3 TAS
IMP
(MGI:MGI:5320281|PMID:16979567)
(MGI:MGI:4365354|PMID:18562536)
UniProtKB PMID:16979567, PMID:18562536 MGI:MGI:4365354, MGI:MGI:5320281 NCBI chr 7:44,997,648...45,002,848
Ensembl chr 7:44,997,648...45,002,848
JBrowse link
G Irf7 interferon regulatory factor 7 TAS
ISO
(MGI:MGI:5320281|PMID:16979567) UniProtKB
MGI
PMID:16979567 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5320281 NCBI chr 7:141,263,183...141,266,499
Ensembl chr 7:141,262,706...141,266,481
JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:131,234,063...131,248,025
Ensembl chr 2:131,234,063...131,248,025
JBrowse link
G Polr3a polymerase (RNA) III (DNA directed) polypeptide A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:24,448,694...24,487,070
Ensembl chr14:24,448,696...24,487,058
JBrowse link
G Polr3b polymerase (RNA) III (DNA directed) polypeptide B ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:84,622,292...84,727,178
Ensembl chr10:84,622,292...84,727,178
JBrowse link
G Polr3c polymerase (RNA) III (DNA directed) polypeptide C ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:96,711,520...96,727,498
Ensembl chr 3:96,711,490...96,727,628
JBrowse link
G Polr3d polymerase (RNA) III (DNA directed) polypeptide D ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:70,438,748...70,443,471
Ensembl chr14:70,438,757...70,443,447
JBrowse link
G Polr3f polymerase (RNA) III (DNA directed) polypeptide F ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:144,527,745...144,541,779
Ensembl chr 2:144,527,718...144,541,995
JBrowse link
G Polr3g polymerase (RNA) III (DNA directed) polypeptide G ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:81,673,837...81,711,013
Ensembl chr13:81,673,843...81,711,013
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IMP (MGI:MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:MGI:3760575 NCBI chr 5:121,130,533...121,191,397
Ensembl chr 5:121,130,533...121,191,397
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) IMP (MGI:MGI:5562517|PMID:23871208) UniProt PMID:23871208 MGI:MGI:5562517 NCBI chr 3:103,856,575...103,912,252
Ensembl chr 3:103,859,795...103,912,247
JBrowse link
G Riok3 RIO kinase 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr18:12,126,091...12,157,367
Ensembl chr18:12,128,741...12,157,387
JBrowse link
G Rnf135 ring finger protein 135 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:80,183,869...80,199,755
Ensembl chr11:80,183,851...80,199,757
JBrowse link
G Tbk1 TANK-binding kinase 1 ISO
IMP
(MGI:MGI:3530402|PMID:15661922) MGI PMID:15661922 GO_REF:0000096, MGI:MGI:3530402, MGI:MGI:4834177 NCBI chr10:121,546,455...121,586,794
Ensembl chr10:121,546,455...121,586,787
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 IMP (MGI:MGI:2669022|PMID:12855817)
(MGI:MGI:2670551|PMID:12872135)
MGI PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chr17:56,269,462...56,276,767
Ensembl chr17:56,269,319...56,276,786
JBrowse link
G Tlr2 toll-like receptor 2 IDA (MGI:MGI:4456948|PMID:15356140) BHF-UCL PMID:15356140 MGI:MGI:4456948 NCBI chr 3:83,836,272...83,841,824
Ensembl chr 3:83,836,272...83,841,767
JBrowse link
G Tlr3 toll-like receptor 3 IDA
ISO
ISS
(MGI:MGI:4456948|PMID:15356140)
(MGI:MGI:3687930|PMID:12054664)
BHF-UCL
MGI
UniProt
PMID:12054664, PMID:15356140 GO_REF:0000096, MGI:MGI:3687930, MGI:MGI:4456948, MGI:MGI:4834177 NCBI chr 8:45,395,665...45,411,075
Ensembl chr 8:45,395,665...45,411,080
JBrowse link
G Tlr4 toll-like receptor 4 IDA
IMP
(MGI:MGI:4456948|PMID:15356140)
(MGI:MGI:3530402|PMID:15661922)
BHF-UCL
MGI
PMID:15356140, PMID:15661922 MGI:MGI:3530402, MGI:MGI:4456948 NCBI chr 4:66,827,551...66,846,581
Ensembl chr 4:66,827,584...66,930,284
JBrowse link
G Tlr7 toll-like receptor 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:167,303,380...167,330,574
Ensembl chr  X:167,304,929...167,330,558
JBrowse link
G Tlr8 toll-like receptor 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:167,241,123...167,264,329
Ensembl chr  X:167,242,696...167,264,329
JBrowse link
G Tlr9 toll-like receptor 9 IDA
ISO
(MGI:MGI:4456948|PMID:15356140) BHF-UCL
MGI
PMID:15356140 GO_REF:0000096, MGI:MGI:4456948, MGI:MGI:4834177 NCBI chr 9:106,222,598...106,226,876
Ensembl chr 9:106,222,598...106,226,883
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 IMP
IDA
(MGI:MGI:5619432|PMID:23776228) CACAO PMID:23776228 MGI:MGI:5619432 NCBI chr16:42,875,689...43,634,392
Ensembl chr16:42,875,881...43,642,602
JBrowse link
G Zc3hav1 zinc finger CCCH type, antiviral 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:38,305,286...38,355,352
Ensembl chr 6:38,305,286...38,354,603
JBrowse link
G Zfp64 zinc finger protein 64 IMP
IDA
(MGI:MGI:5619431|PMID:23857586) CACAO PMID:23857586 MGI:MGI:5619431 NCBI chr 2:168,893,331...168,955,587
Ensembl chr 2:168,893,331...168,955,587
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    multicellular organismal process 8908
      cytokine production 843
        type I interferon production 94
          positive regulation of type I interferon production 53
            positive regulation of interferon-beta production 34
Path 2
Term Annotations click to browse term
  biological_process 23386
    metabolic process 11301
      organic substance metabolic process 10764
        macromolecule metabolic process 9284
          gene expression 5856
            cytokine production 843
              regulation of cytokine production 755
                positive regulation of cytokine production 468
                  positive regulation of type I interferon production 53
                    positive regulation of interferon-beta production 34
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.