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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of interferon-beta production
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Accession:GO:0032728 term browser browse the term
Definition:Any process that activates or increases the frequency, rate, or extent of interferon-beta production.
Synonyms:exact_synonym: positive regulation of IFN-beta production;   up regulation of interferon-beta production;   upregulation of interferon-beta production
 narrow_synonym: activation of interferon-beta production;   positive regulation of interferon-beta biosynthetic process;   positive regulation of interferon-beta secretion;   stimulation of interferon-beta production
 alt_id: GO:0035549;   GO:0045359


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positive regulation of interferon-beta production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX3X DEAD-box helicase 3 X-linked IEA Ensembl GO_REF:0000107 NCBI chr  X:36,988,031...37,005,496
Ensembl chr  X:36,988,031...37,044,769
JBrowse link
G DDX58 DExD/H-box helicase 58 ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024, GO_REF:0000107 NCBI chr10:33,891,720...33,976,151
Ensembl chr10:33,865,838...33,933,455
JBrowse link
G DHX58 DExH-box helicase 58 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:20,647,698...20,656,691
Ensembl chr12:20,647,692...20,656,692
JBrowse link
G DHX9 DExH-box helicase 9 IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,093,667...124,185,352
JBrowse link
G FLOT1 flotillin 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,160...23,265,106
JBrowse link
G HMGB1 high mobility group box 1 ISO (MGI:MGI:4367121|PMID:19890330) UniProt PMID:19890330 MGI:MGI:4367121 NCBI chr11:7,195,556...7,321,071 JBrowse link
G HMGB2 high mobility group box 2 IEA Ensembl GO_REF:0000107 NCBI chr14:16,709,966...16,712,288
Ensembl chr14:16,710,047...16,717,126
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:68,930,998...68,985,145
Ensembl chr15:68,928,244...68,985,074
JBrowse link
G IFNAR1 interferon alpha and beta receptor subunit 1 ISO (MGI:MGI:5619426|PMID:24598055) CACAO PMID:24598055 MGI:MGI:5619426 NCBI chr13:196,925,731...196,951,398
Ensembl chr13:196,925,704...196,952,239
JBrowse link
G IRF1 interferon regulatory factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:134,776,122...134,783,646
Ensembl chr 2:134,776,134...134,783,646
JBrowse link
G IRF3 interferon regulatory factor 3 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 6:54,701,733...54,706,079
Ensembl chr 6:54,701,668...54,707,151
JBrowse link
G IRF7 interferon regulatory factor 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:372,235...375,572
Ensembl chr 2:371,606...375,381
JBrowse link
G MAVS mitochondrial antiviral signaling protein IEA Ensembl GO_REF:0000107 NCBI chr17:31,850,646...31,869,273
Ensembl chr17:31,850,155...31,869,187
JBrowse link
G POLR3A RNA polymerase III subunit A IEA Ensembl GO_REF:0000107 NCBI chr14:80,410,143...80,471,740
Ensembl chr14:80,410,147...80,471,700
JBrowse link
G POLR3B RNA polymerase III subunit B IEA Ensembl GO_REF:0000107 NCBI chr 5:13,805,157...13,926,733
Ensembl chr 5:13,590,851...13,926,604
JBrowse link
G POLR3C RNA polymerase III subunit C IEA Ensembl GO_REF:0000107 NCBI chr 4:99,480,213...99,494,137
Ensembl chr 4:99,472,354...99,494,142
JBrowse link
G POLR3D RNA polymerase III subunit D IEA Ensembl GO_REF:0000107 NCBI chr14:6,520,962...6,529,526
Ensembl chr14:6,521,035...6,532,182
JBrowse link
G POLR3F RNA polymerase III subunit F IEA Ensembl GO_REF:0000107 NCBI chr17:26,719,339...26,737,635
Ensembl chr17:26,719,514...26,737,626
JBrowse link
G POLR3G RNA polymerase III subunit G ISO (PMID:19609254), (PMID:19631370) UniProtKB PMID:19609254, PMID:19631370 NCBI chr 2:97,646,112...97,688,255 JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:9,505,034...9,531,044
Ensembl chr  X:9,502,748...9,600,301
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 IEA Ensembl GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,168...39,292,018
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 IEA Ensembl GO_REF:0000107 NCBI chr 4:106,692,102...106,758,101
Ensembl chr 4:106,686,604...106,758,099
JBrowse link
G RIOK3 RIO kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:108,338,986...108,363,872
Ensembl chr 6:108,338,993...108,363,869
JBrowse link
G RNF135 ring finger protein 135 IEA Ensembl GO_REF:0000107 NCBI chr12:42,793,755...42,808,937
Ensembl chr12:42,790,187...42,808,919
JBrowse link
G TBK1 TANK binding kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:28,880,210...28,929,964
Ensembl chr 5:28,828,568...28,929,964
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:74,004,566...74,021,100
Ensembl chr 2:74,004,550...74,021,094
JBrowse link
G TLR2 toll like receptor 2 ISO (MGI:MGI:4456948|PMID:15356140) BHF-UCL PMID:15356140 MGI:MGI:4456948 NCBI chr 8:75,416,257...75,428,370
Ensembl chr 8:75,411,991...75,446,850
JBrowse link
G TLR3 toll like receptor 3 IEA Ensembl GO_REF:0000107 NCBI chr15:46,966,262...46,977,774
Ensembl chr15:46,966,040...47,058,734
JBrowse link
G TLR4 toll like receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,059,004
JBrowse link
G TLR8 toll like receptor 8 IEA Ensembl GO_REF:0000107 NCBI chr  X:9,551,284...9,616,762
Ensembl chr  X:9,549,552...9,616,759
JBrowse link
G TLR9 toll like receptor 9 ISS UniProt GO_REF:0000024 NCBI chr13:34,353,444...34,370,990 JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 IEA Ensembl GO_REF:0000107 NCBI chr13:144,855,821...145,668,320
Ensembl chr13:144,855,976...145,754,184
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21102435) UniProtKB PMID:21102435 NCBI chr18:10,529,805...10,588,913
Ensembl chr18:10,509,629...10,588,832
JBrowse link
G ZFP64 ZFP64 zinc finger protein ISO (MGI:MGI:5619431|PMID:23857586) CACAO PMID:23857586 MGI:MGI:5619431 NCBI chr17:53,364,021...53,459,587
Ensembl chr17:53,369,672...53,459,599
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16545
    multicellular organismal process 8059
      cytokine production 784
        type I interferon production 91
          positive regulation of type I interferon production 53
            positive regulation of interferon-beta production 34
Path 2
Term Annotations click to browse term
  biological_process 16545
    metabolic process 10588
      organic substance metabolic process 10037
        macromolecule metabolic process 8724
          gene expression 5316
            cytokine production 784
              regulation of cytokine production 699
                positive regulation of cytokine production 437
                  positive regulation of type I interferon production 53
                    positive regulation of interferon-beta production 34
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.