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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of interferon-beta production
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Accession:GO:0032728 term browser browse the term
Definition:Any process that activates or increases the frequency, rate, or extent of interferon-beta production.
Synonyms:exact_synonym: positive regulation of IFN-beta production;   up regulation of interferon-beta production;   upregulation of interferon-beta production
 narrow_synonym: activation of interferon-beta production;   positive regulation of interferon-beta biosynthetic process;   positive regulation of interferon-beta secretion;   stimulation of interferon-beta production
 alt_id: GO:0035549;   GO:0045359


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positive regulation of interferon-beta production term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked ISO (PMID:27980081), (PMID:31575075) UniProt PMID:27980081, PMID:31575075 NCBI chrNW_004936502:7,770,896...7,820,555 JBrowse link
G Ddx58 DExD/H-box helicase 58 ISO (PMID:17079289)
(PMID:19211564), (PMID:19609254), (PMID:19631370), (PMID:21957149)
(MGI:MGI:5318026|PMID:17942531)
BHF-UCL
UniProt
UniProtKB
PMID:17079289, PMID:17942531, PMID:19211564, PMID:19609254, PMID:19631370, PMID:21957149 MGI:MGI:5318026 NCBI chrNW_004936524:1,141,840...1,200,638 JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:21957149) UniProt PMID:21957149 NCBI chrNW_004936481:6,896,487...6,934,938 JBrowse link
G Flot1 flotillin 1 ISO (PMID:25204797) UniProtKB PMID:25204797 NCBI chrNW_004936837:387,012...401,076 JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:4367121|PMID:19890330) UniProt PMID:19890330 MGI:MGI:4367121 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
G Hmgb2 high mobility group box 2 ISO (MGI:MGI:4367121|PMID:19890330) UniProtKB PMID:19890330 MGI:MGI:4367121 NCBI chrNW_004936516:4,536,664...4,539,331 JBrowse link
G Ifih1 interferon induced with helicase C domain 1 ISO (PMID:17600090)
(PMID:19211564), (PMID:19656871), (PMID:21957149)
UniProtKB
UniProt
PMID:17600090, PMID:19211564, PMID:19656871, PMID:21957149 NCBI chrNW_004936469:16,721,306...16,778,249 JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 ISO (MGI:MGI:5619426|PMID:24598055) CACAO PMID:24598055 MGI:MGI:5619426 NCBI chrNW_004936500:8,953,809...8,975,261 JBrowse link
G Irf1 interferon regulatory factor 1 ISO (PMID:21389130) UniProtKB PMID:21389130 NCBI chrNW_004936647:2,686,247...2,693,633 JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:4365354|PMID:18562536) UniProtKB PMID:18562536 MGI:MGI:4365354 NCBI chrNW_004936664:3,477,750...3,482,489 JBrowse link
G Irf7 interferon regulatory factor 7 ISO (PMID:22065573) CACAO PMID:22065573 NCBI chrNW_004936888:445,340...448,801 JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:16127453)
(PMID:19609254), (PMID:19631370), (PMID:21957149)
BHF-UCL
UniProt
PMID:16127453, PMID:19609254, PMID:19631370, PMID:21957149 NCBI chrNW_004936485:14,842,778...14,859,163 JBrowse link
G Polr3a RNA polymerase III subunit A ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chrNW_004936521:1,570,863...1,613,410 JBrowse link
G Polr3b RNA polymerase III subunit B ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chrNW_004936492:8,415,997...8,544,149 JBrowse link
G Polr3c RNA polymerase III subunit C ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chrNW_004936867:586,798...599,069 JBrowse link
G Polr3d RNA polymerase III subunit D ISO (PMID:19631370) UniProtKB PMID:19631370 NCBI chrNW_004936555:6,051,528...6,057,165 JBrowse link
G Polr3f RNA polymerase III subunit F ISO (PMID:19631370) UniProtKB PMID:19631370 NCBI chrNW_004936485:1,796,857...1,814,186 JBrowse link
G Polr3g RNA polymerase III subunit G ISO (PMID:19609254), (PMID:19631370) UniProtKB PMID:19609254, PMID:19631370 NCBI chrNW_004936469:8,574,120...8,611,643 JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO (MGI:MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:MGI:3760575 NCBI chrNW_004936668:2,602,261...2,687,903 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 ISO (MGI:MGI:5562517|PMID:23871208) UniProt PMID:23871208 MGI:MGI:5562517 NCBI chrNW_004936690:2,180,804...2,232,869 JBrowse link
G Riok3 RIO kinase 3 ISO (PMID:24807708) UniProtKB PMID:24807708 NCBI chrNW_004936550:2,921,272...2,949,288 JBrowse link
G Rnf135 ring finger protein 135 ISO (PMID:19017631) UniProtKB PMID:19017631 NCBI chrNW_004936538:2,741,308...2,757,042 JBrowse link
G Tbk1 TANK binding kinase 1 ISO (PMID:16127453)
(MGI:MGI:3530402|PMID:15661922)
BHF-UCL
MGI
PMID:15661922, PMID:16127453 MGI:MGI:3530402 NCBI chrNW_004936545:2,763,755...2,809,229 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 ISO (MGI:MGI:2669022|PMID:12855817)
(MGI:MGI:2670551|PMID:12872135)
MGI PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Tlr2 toll like receptor 2 ISO (MGI:MGI:4456948|PMID:15356140) BHF-UCL PMID:15356140 MGI:MGI:4456948 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tlr3 toll like receptor 3 ISO (MGI:MGI:4456948|PMID:15356140)
(PMID:12054664)
(PMID:16286015)
BHF-UCL
UniProt
PMID:12054664, PMID:15356140, PMID:16286015 MGI:MGI:4456948 NCBI chrNW_004936554:3,370,766...3,388,125 JBrowse link
G Tlr4 toll like receptor 4 ISO (MGI:MGI:4456948|PMID:15356140)
(MGI:MGI:3530402|PMID:15661922)
BHF-UCL
MGI
PMID:15356140, PMID:15661922 MGI:MGI:3530402, MGI:MGI:4456948 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Tlr7 toll like receptor 7 ISO (PMID:16286015) UniProt PMID:16286015 NCBI chrNW_004936470:2,593,544...2,610,972 JBrowse link
G Tlr8 toll like receptor 8 ISO (PMID:16286015) UniProt PMID:16286015 NCBI chrNW_004936470:2,638,020...2,642,201 JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5619432|PMID:23776228) CACAO PMID:23776228 MGI:MGI:5619432 NCBI chrNW_004936536:1,776,065...2,546,286 JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21102435) UniProtKB PMID:21102435 NCBI chrNW_004936592:3,321,564...3,379,015 JBrowse link
G Zfp64 ZFP64 zinc finger protein ISO (MGI:MGI:5619431|PMID:23857586) CACAO PMID:23857586 MGI:MGI:5619431 NCBI chrNW_004936514:3,028,526...3,100,294 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12001
    multicellular organismal process 6241
      cytokine production 714
        type I interferon production 90
          positive regulation of type I interferon production 52
            positive regulation of interferon-beta production 32
Path 2
Term Annotations click to browse term
  biological_process 12001
    metabolic process 7670
      organic substance metabolic process 7376
        macromolecule metabolic process 6395
          gene expression 3941
            cytokine production 714
              regulation of cytokine production 637
                positive regulation of cytokine production 401
                  positive regulation of type I interferon production 52
                    positive regulation of interferon-beta production 32
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.