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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma membrane bounded cell projection cytoplasm
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Accession:GO:0032838 term browser browse the term
Definition:All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection.


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plasma membrane bounded cell projection cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:8548684
G Cntf ciliary neurotrophic factor JBrowse link 1 229,599,009 229,601,032 RGD:1358521
G Ranbp1 RAN binding protein 1 JBrowse link 11 86,890,585 86,898,818 RGD:9835000
A axonemal microtubule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfap206 cilia and flagella associated protein 206 JBrowse link 5 50,148,685 50,193,580 RGD:1600115
axon cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr10 actin related protein 10 JBrowse link 6 93,385,457 93,411,605 RGD:1600115
G Agbl4 ATP/GTP binding protein-like 4 JBrowse link 5
5
130,742,297
130,286,393
131,656,581
130,305,884
RGD:1600115
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 17 5,510,009 5,614,416 RGD:1600115
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1600115
G Ap3b2 adaptor related protein complex 3 subunit beta 2 JBrowse link 1 143,284,041 143,315,846 RGD:1600115
G Ap3d1 adaptor related protein complex 3 subunit delta 1 JBrowse link 7 11,838,639 11,873,992 RGD:1600115
G Ap3m1 adaptor related protein complex 3 subunit mu 1 JBrowse link 15 3,435,998 3,454,281 RGD:1600115
G Ap3m2 adaptor related protein complex 3 subunit mu 2 JBrowse link 16 74,075,842 74,091,230 RGD:1600115
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 JBrowse link 18 40,732,472 40,798,064 RGD:1600115
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 JBrowse link 1 141,612,961 141,655,417 RGD:1600115
G Arl8a ADP-ribosylation factor like GTPase 8A JBrowse link 13 51,972,974 51,981,976 RGD:1600115
G Arl8b ADP-ribosylation factor like GTPase 8B JBrowse link 4 140,837,745 140,881,866 RGD:1600115
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 JBrowse link 7 3,342,630 3,346,238 RGD:1600115
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 JBrowse link 1 263,913,901 263,920,989 RGD:1600115
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1600115
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 JBrowse link 14 79,013,808 79,015,108 RGD:1600115
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 JBrowse link 17 26,808,193 26,833,257 RGD:1600115
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:1600115
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:12793047
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:1624291
G Caly calcyon neuron-specific vesicular protein JBrowse link 1 212,537,851 212,549,040 RGD:1600115
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link 1 154,916,274 157,274,077 RGD:1600115
G Dst dystonin JBrowse link 9 37,902,336 38,296,961 RGD:1600115
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:1600115
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 JBrowse link 6 134,958,854 135,085,769 RGD:1600115
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 JBrowse link 4 30,807,755 31,121,097 RGD:12793047
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:13207432
G Dynlrb1 dynein light chain roadblock-type 1 JBrowse link 3 150,761,329 150,782,493 RGD:1600115
G Fbxw11 F-box and WD repeat domain containing 11 JBrowse link 10 17,542,374 17,640,718 RGD:1600115
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:1600115
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1600115
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1600115
G Hspb1 heat shock protein family B (small) member 1 JBrowse link 12 23,839,390 23,841,051 RGD:1600115
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:1600115
G Kif1b kinesin family member 1B JBrowse link 5 165,994,803 166,133,497 RGD:1600115
G Kif1c kinesin family member 1C JBrowse link 10 57,322,259 57,352,395 RGD:1600115
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:11049593
G Kif5a kinesin family member 5A JBrowse link 7 70,515,832 70,552,897 RGD:1600115
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:1600115
G Kif5c kinesin family member 5C JBrowse link 3 35,014,157 35,257,417 RGD:1600115
G LOC108348065 histone deacetylase 6 JBrowse link X 15,396,185 15,417,486 RGD:1600115
G Madd MAP-kinase activating death domain JBrowse link 3 79,960,301 80,003,023 RGD:1600115
G Map1a microtubule-associated protein 1A JBrowse link 3 113,251,918 113,272,193 RGD:1600115
G Map6 microtubule-associated protein 6 JBrowse link 1 164,225,776 164,292,094 RGD:1600115
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 JBrowse link 10 14,259,394 14,299,276 RGD:1600115
G Mgarp mitochondria-localized glutamic acid-rich protein JBrowse link 2 140,444,963 140,453,719 RGD:1600115
G Ndel1 nudE neurodevelopment protein 1-like 1 JBrowse link 10 55,398,919 55,456,654 RGD:1600115
G Nefl neurofilament light JBrowse link 15 44,799,378 44,803,251 RGD:1600115
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 JBrowse link 10 61,456,144 61,577,412 RGD:1600115
G Rab21 RAB21, member RAS oncogene family JBrowse link 7 58,261,985 58,286,770 RGD:1600115
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:1600115
G Ranbp1 RAN binding protein 1 JBrowse link 11 86,890,585 86,898,818 RGD:9835000
G Rangap1 RAN GTPase activating protein 1 JBrowse link 7 122,939,266 122,967,178 RGD:9835000
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1600115
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:1600115
G Spast spastin JBrowse link 6 22,230,067 22,282,166 RGD:1600115
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin JBrowse link 19 55,880,549 55,914,729 RGD:1600115
G Sybu syntabulin JBrowse link 7 83,600,614 83,670,121 RGD:1600115
G Terf2 telomeric repeat binding factor 2 JBrowse link 19 39,271,992 39,301,506 RGD:1600115
G Tmem108 transmembrane protein 108 JBrowse link 8 111,968,568 112,265,623 RGD:1600115
G Trak1 trafficking kinesin protein 1 JBrowse link 8 129,946,596 130,106,382 RGD:1600115
G Trak2 trafficking kinesin protein 2 JBrowse link 9 65,698,706 65,763,351 RGD:1600115
G Trim46 tripartite motif-containing 46 JBrowse link 2 188,548,608 188,561,617 RGD:1600115
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:1600115
G Zc3h14 zinc finger CCCH type containing 14 JBrowse link 6 122,729,834 122,767,462 RGD:1624291
axonemal basal plate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Wdpcp WD repeat containing planar cell polarity effector JBrowse link 14 106,393,959 106,759,511 RGD:1624291
RGD:1600115
axonemal central apparatus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102550841 uncharacterized LOC102550841 JBrowse link 9 76,913,521 77,007,087 RGD:13792537
G Spag16 sperm associated antigen 16 JBrowse link 9 77,027,626 77,833,476 RGD:1624291
RGD:13792537
G Spag17 sperm associated antigen 17 JBrowse link 2 202,159,659 202,452,361 RGD:1624291
RGD:13792537
G Spag6l sperm associated antigen 6-like JBrowse link 11 88,424,493 88,517,910 RGD:1624291
axonemal central pair projection term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hydin Hydin, axonemal central pair apparatus protein JBrowse link 19 41,036,507 41,379,634 RGD:1624291
axonemal dynein complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc65 coiled-coil domain containing 65 JBrowse link 7 140,383,395 140,397,186 RGD:1600115
G Dnah1 dynein, axonemal, heavy chain 1 JBrowse link 16 7,345,131 7,407,009 RGD:1600115
RGD:13792537
G Dnah12 dynein, axonemal, heavy chain 12 JBrowse link 16 2,377,218 2,534,130 RGD:13792537
G Dnah5 dynein, axonemal, heavy chain 5 JBrowse link 2
2
80,947,730
81,159,060
81,143,997
81,337,560
RGD:1624291
G Dnah7 dynein, axonemal, heavy chain 7 JBrowse link 9
9
60,070,087
59,564,253
60,330,121
59,595,347
RGD:13792537
G Dnai2 dynein, axonemal, intermediate chain 2 JBrowse link 10 103,266,343 103,301,521 RGD:1624291
G Dnai4 dynein axonemal intermediate chain 4 JBrowse link 5 122,551,370 122,642,161 RGD:13792537
RGD:1624291
RGD:1600115
G Dnhd1 dynein heavy chain domain 1 JBrowse link 1 170,473,792 170,570,220 RGD:13792537
G Drc1 dynein regulatory complex subunit 1 JBrowse link 6 27,425,237 27,460,038 RGD:1600115
axonemal microtubule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arfgef2 ADP ribosylation factor guanine nucleotide exchange factor 2 JBrowse link 3 163,570,435 163,656,612 RGD:1304338
G Cep162 centrosomal protein 162 JBrowse link 8 94,863,282 94,921,917 RGD:1624291
RGD:1600115
G Rpgrip1l Rpgrip1-like JBrowse link 19 17,115,266 17,208,055 RGD:11537356
G Saxo1 stabilizer of axonemal microtubules 1 JBrowse link 5 104,771,081 104,921,001 RGD:1624291
RGD:13792537
G Saxo2 stabilizer of axonemal microtubules 2 JBrowse link 1 144,586,260 144,601,358 RGD:13792537
G Saxol1 stabilizer of axonemal microtubules like 1 JBrowse link X 29,520,263 29,522,420 RGD:1600115
RGD:13792537
G Ttc30a1 tetratricopeptide repeat domain 30A1 JBrowse link 3 62,800,932 62,803,373 RGD:13792537
G Ttc30b tetratricopeptide repeat domain 30B JBrowse link 3 62,758,754 62,761,325 RGD:13792537
RGD:1600115
axoneme term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07063281.1 RGD:13792537
G Ak8 adenylate kinase 8 JBrowse link 3 7,279,429 7,394,509 RGD:1624291
G Akap14 A-kinase anchoring protein 14 JBrowse link X 123,773,430 123,788,898 RGD:1624291
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link 3 80,634,470 80,830,068 RGD:1624291
G Arl13b ADP-ribosylation factor like GTPase 13B JBrowse link 7 1,122,567 1,188,209 RGD:1624291
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link 1 266,287,015 266,333,099 RGD:1600115
RGD:1624291
G Arl6 ADP-ribosylation factor like GTPase 6 JBrowse link 11 42,858,476 42,884,324 RGD:13792537
G Armc4 armadillo repeat containing 4 JBrowse link 17 60,283,926 60,474,289 RGD:1624291
G Atg14 autophagy related 14 JBrowse link 15 24,343,418 24,374,776 RGD:1624291
RGD:1600115
G Atg16l1 autophagy related 16-like 1 JBrowse link 9 94,879,876 94,915,231 RGD:1624291
G Atg5 autophagy related 5 JBrowse link 20 49,301,783 49,393,147 RGD:1624291
RGD:1600115
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:1624291
RGD:1600115
G Bbs1 Bardet-Biedl syndrome 1 JBrowse link 1 220,146,084 220,165,545 RGD:13792537
G Bbs5 Bardet-Biedl syndrome 5 JBrowse link 3 55,886,695 55,907,717 RGD:1624291
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link 2 123,283,402 123,322,991 RGD:1624291
RGD:13792537
G Ccdc114 coiled-coil domain containing 114 JBrowse link 1 101,904,042 101,932,999 RGD:1624291
RGD:13792537
G Ccdc151 coiled-coil domain containing 151 JBrowse link 8 23,000,912 23,014,707 RGD:1624291
G Ccdc39 coiled-coil domain containing 39 JBrowse link 2 120,278,605 120,367,829 RGD:1600115
RGD:13792537
RGD:1624291
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
G Ccdc63 coiled-coil domain containing 63 JBrowse link 12 39,905,120 39,950,719 RGD:13792537
G Ccdc65 coiled-coil domain containing 65 JBrowse link 7 140,383,395 140,397,186 RGD:13792537
G Ccsap centriole, cilia and spindle-associated protein JBrowse link 19 56,615,326 56,634,031 RGD:1624291
RGD:13792537
G Cenpf centromere protein F JBrowse link 13 108,132,499 108,178,609 RGD:1624291
G Cfap36 cilia and flagella associated protein 36 JBrowse link 14 113,618,954 113,644,874 RGD:13792537
G Cfap43 cilia and flagella associated protein 43 JBrowse link 1 267,511,359 267,598,642 RGD:13792537
RGD:1624291
G Cfap70 cilia and flagella associated protein 70 JBrowse link 15 4,285,049 4,350,707 RGD:1624291
G Cluap1 clusterin associated protein 1 JBrowse link 10 11,847,058 11,878,792 RGD:1624291
G Ctsh cathepsin H JBrowse link 8 97,439,155 97,458,293 RGD:5686399
G Cys1 cystin 1 JBrowse link 6 43,844,937 43,862,131 RGD:1624291
G Dcdc2 doublecortin domain containing 2 JBrowse link 17 41,838,201 42,031,265 RGD:1600115
RGD:13792537
RGD:1624291
G Dcx doublecortin JBrowse link X 115,098,675 115,175,515 RGD:13792537
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1600115
RGD:13792537
RGD:1624291
G Dnah1 dynein, axonemal, heavy chain 1 JBrowse link 16 7,345,131 7,407,009 RGD:1624291
RGD:1600115
G Dnah11 dynein, axonemal, heavy chain 11 JBrowse link 6 145,784,893 146,099,212 RGD:1624291
RGD:13792537
G Dnah17 dynein, axonemal, heavy chain 17 JBrowse link 10 107,028,115 107,161,288 RGD:1624291
RGD:13792537
G Dnah2 dynein, axonemal, heavy chain 2 JBrowse link 10 56,029,022 56,154,602 RGD:1624291
RGD:13792537
G Dnah5 dynein, axonemal, heavy chain 5 JBrowse link 2
2
80,947,730
81,159,060
81,143,997
81,337,560
RGD:1600115
RGD:13792537
RGD:1624291
G Dnah8 dynein, axonemal, heavy chain 8 JBrowse link 20 9,301,317 9,560,805 RGD:1624291
G Dnah9 dynein, axonemal, heavy chain 9 JBrowse link 10 52,351,226 52,711,289 RGD:1624291
RGD:13792537
G Dnai2 dynein, axonemal, intermediate chain 2 JBrowse link 10 103,266,343 103,301,521 RGD:1624291
G Dnai4 dynein axonemal intermediate chain 4 JBrowse link 5 122,551,370 122,642,161 RGD:1600115
RGD:1624291
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 1 165,515,718 165,530,163 RGD:1624291
G Dnali1 dynein, axonemal, light intermediate chain 1 JBrowse link 5 143,053,365 143,062,203 RGD:13792537
RGD:1624291
RGD:1600115
G Drc1 dynein regulatory complex subunit 1 JBrowse link 6 27,425,237 27,460,038 RGD:1600115
RGD:13792537
G Drc3 dynein regulatory complex subunit 3 JBrowse link 10 46,712,021 46,762,276 RGD:1624291
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 8 5,217,054 5,436,969 RGD:1624291
RGD:13792537
RGD:1600115
G Dync2i2 dynein 2 intermediate chain 2 JBrowse link 3 8,599,251 8,615,329 RGD:1624291
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:1624291
RGD:13792537
G Dzip1l DAZ interacting zinc finger protein 1-like JBrowse link 8 107,875,659 107,916,298 RGD:1624291
G Efhc1 EF-hand domain containing 1 JBrowse link 9 27,068,505 27,107,713 RGD:1624291
RGD:13792537
G Efhc2 EF-hand domain containing 2 JBrowse link X 5,825,551 6,026,398 RGD:13792537
G Gabarap GABA type A receptor-associated protein JBrowse link 10 56,601,288 56,604,223 RGD:1624291
RGD:1600115
G Gas8 growth arrest specific 8 JBrowse link 19 56,316,367 56,335,873 RGD:1600115
RGD:1624291
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:1624291
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:1624291
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
G Gnat3 G protein subunit alpha transducin 3 JBrowse link 4 13,827,764 13,878,126 RGD:2302145
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
RGD:13792537
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:13792537
G Ift57 intraflagellar transport 57 JBrowse link 11 53,664,638 53,731,779 RGD:1624291
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Inpp5e inositol polyphosphate-5-phosphatase E JBrowse link 3 3,843,307 3,856,154 RGD:1624291
RGD:1600115
G Kif17 kinesin family member 17 JBrowse link 5 156,628,409 156,665,752 RGD:1624291
G Kif19 kinesin family member 19 JBrowse link 10 103,308,392 103,334,466 RGD:1600115
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:1581597
G Kifap3 kinesin-associated protein 3 JBrowse link 13 82,072,497 82,217,256 RGD:1624291
RGD:13792537
G Lca5 lebercilin LCA5 JBrowse link 8 90,926,309 90,984,271 RGD:1624291
RGD:13792537
G Lca5l lebercilin LCA5 like JBrowse link 11 36,512,823 36,546,806 RGD:13792537
G LOC103689994 radial spoke head protein 4 homolog A JBrowse link 20 33,945,770 33,962,077 RGD:13792537
G LOC103691261 sperm flagellar protein 1-like JBrowse link 1 212,309,940 212,317,411 RGD:13792537
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:1624291
G Map1lc3b microtubule-associated protein 1 light chain 3 beta JBrowse link 19 53,635,449 53,643,970 RGD:1624291
G Map4 microtubule-associated protein 4 JBrowse link 8 118,013,584 118,159,934 RGD:1624291
G Mapk15 mitogen-activated protein kinase 15 JBrowse link 7 117,041,287 117,061,799 RGD:1624291
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:1624291
G Mns1 meiosis-specific nuclear structural 1 JBrowse link 8 79,054,240 79,075,119 RGD:1624291
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 JBrowse link 18 22,964,121 23,047,896 RGD:1600115
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 JBrowse link 8 114,300,248 114,350,686 RGD:1624291
RGD:1600115
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
RGD:1600115
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 10 97,940,705 97,959,199 RGD:1624291
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 8 117,486,085 117,548,768 RGD:1600115
RGD:1624291
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:13792537
RGD:1624291
G Rp1l1 RP1 like 1 JBrowse link 15 47,344,380 47,384,461 RGD:1624291
RGD:13792537
G Rpgrip1 RPGR interacting protein 1 JBrowse link 15 28,521,287 28,575,046 RGD:1624291
G Rpgrip1l Rpgrip1-like JBrowse link 19 17,115,266 17,208,055 RGD:1624291
G Rsph4a radial spoke head component 4A JBrowse link 20 32,450,701 32,467,362 RGD:1624291
RGD:13792537
G Rsph6a radial spoke head 6 homolog A JBrowse link 1 79,959,555 79,979,217 RGD:1624291
RGD:13792537
G Rsph9 radial spoke head component 9 JBrowse link 9 17,224,589 17,245,093 RGD:1624291
RGD:13792537
G Septin2 septin 2 JBrowse link 9 100,624,876 100,658,053 RGD:1624291
G Septin7 septin 7 JBrowse link 8 26,412,910 26,476,615 RGD:1624291
RGD:1600115
G Septin9 septin 9 JBrowse link 10 106,208,308 106,340,747 RGD:1624291
G Septin9 septin 9 RGD:1600115
G Spag16 sperm associated antigen 16 JBrowse link 9 77,027,626 77,833,476 RGD:1624291
G Spata4 spermatogenesis associated 4 JBrowse link 16 39,961,160 39,970,530 RGD:13792537
G Spata7 spermatogenesis associated 7 JBrowse link 6 122,603,248 122,648,718 RGD:1600115
RGD:13792537
RGD:1624291
G Spef1 sperm flagellar 1 JBrowse link 3 123,712,907 123,720,787 RGD:13792537
G Tctex1d2 Tctex1 domain containing 2 JBrowse link 11 71,593,302 71,601,662 RGD:1624291
G Tctex1d4 Tctex1 domain containing 4 JBrowse link 5 135,995,128 135,997,807 RGD:1624291
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:11535084
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link 9 98,621,499 98,658,223 RGD:1624291
RGD:13792537
G Ttc25 tetratricopeptide repeat domain 25 JBrowse link 10 88,459,490 88,488,237 RGD:1624291
G Ttll10 tubulin tyrosine ligase like 10 JBrowse link 5 173,471,020 173,517,783 RGD:1624291
RGD:1600115
G Ttll3 tubulin tyrosine ligase like 3 JBrowse link 4 145,341,059 145,366,614 RGD:1624291
G Ttll8 tubulin tyrosine ligase like 8 JBrowse link 7 129,906,998 129,948,578 RGD:1624291
G Tubb4a tubulin, beta 4A class IVa JBrowse link 9 9,961,020 9,968,420 RGD:1624291
G Tulp3 TUB like protein 3 JBrowse link 4 161,636,084 161,677,807 RGD:1624291
G Wdpcp WD repeat containing planar cell polarity effector JBrowse link 14 106,393,959 106,759,511 RGD:1600115
G Wdr11 WD repeat domain 11 JBrowse link 1 202,770,810 202,816,336 RGD:1624291
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:1624291
RGD:13792537
RGD:1600115
ciliary plasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dync2i1 dynein 2 intermediate chain 1 JBrowse link 6 144,069,077 144,124,975 RGD:13792537
G Dync2i2 dynein 2 intermediate chain 2 JBrowse link 3 8,599,251 8,615,329 RGD:13792537
G Nek4 NIMA-related kinase 4 JBrowse link 16 7,035,002 7,080,272 RGD:13204813
dendrite cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd12 abhydrolase domain containing 12, lysophospholipase JBrowse link 3 146,630,298 146,690,375 RGD:1624291
G Abhd13 abhydrolase domain containing 13 JBrowse link 16 85,315,275 85,330,108 RGD:1624291
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:2291858
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:68238
G Canx calnexin JBrowse link 10 35,800,942 35,833,939 RGD:2313156
G Ccin calicin JBrowse link 5 59,452,348 59,454,235 RGD:13792537
G Cdkl5 cyclin-dependent kinase-like 5 JBrowse link X 35,536,396 35,773,204 RGD:8554575
RGD:13792537
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:68238
G Flot2 flotillin 2 JBrowse link 10 65,304,901 65,329,332 RGD:1600115
G Gabarapl1 GABA type A receptor associated protein like 1 JBrowse link 4 163,293,724 163,302,866 RGD:4890439
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 2 179,584,302 179,704,629 RGD:1642304
G Grik2 glutamate ionotropic receptor kainate type subunit 2 JBrowse link 20 53,791,428 54,517,691 RGD:1642495
G Grik3 glutamate ionotropic receptor kainate type subunit 3 JBrowse link 5 143,500,441 143,715,546 RGD:1642495
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1600115
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:9686436
G Kcnab1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 JBrowse link 2 155,555,798 156,011,438 RGD:9743934
G Kif17 kinesin family member 17 JBrowse link 5 156,628,409 156,665,752 RGD:1600115
G Kif5a kinesin family member 5A JBrowse link 7 70,515,832 70,552,897 RGD:1600115
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:1600115
G Kif5c kinesin family member 5C JBrowse link 3 35,014,157 35,257,417 RGD:1600115
G Klhl17 kelch-like family member 17 JBrowse link 5 173,654,238 173,659,706 RGD:625502
RGD:13792537
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:13514082
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:2293331
G Map2k4 mitogen activated protein kinase kinase 4 JBrowse link 10 52,196,121 52,301,887 RGD:2293331
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:2293331
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:2293331
G Oprm1 opioid receptor, mu 1 JBrowse link 1 43,454,803 43,704,948 RGD:2316627
G Pura purine rich element binding protein A JBrowse link 18 29,104,712 29,114,918 RGD:1600115
G Sfpq splicing factor proline and glutamine rich JBrowse link 5 145,079,803 145,088,517 RGD:1600115
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:1624291
RGD:1600115
G Stau1 staufen double-stranded RNA binding protein 1 JBrowse link 3 163,703,204 163,748,996 RGD:1600115
G Stau2 staufen double-stranded RNA binding protein 2 JBrowse link 5 2,257,910 2,497,429 RGD:1600115
G Trak2 trafficking kinesin protein 2 JBrowse link 9 65,698,706 65,763,351 RGD:1600115
G Uhmk1 U2AF homology motif kinase 1 JBrowse link 13 88,521,625 88,536,728 RGD:1624291
G Wasf1 WASP family member 1 JBrowse link 20 48,456,191 48,503,768 RGD:1600115
G Wls Wnt ligand secretion mediator JBrowse link 2 266,315,036 266,431,220 RGD:7488965
G Zc3h14 zinc finger CCCH type containing 14 JBrowse link 6 122,729,834 122,767,462 RGD:1624291
dendritic spine cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684988
distal portion of axoneme term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnah9 dynein, axonemal, heavy chain 9 JBrowse link 10 52,351,226 52,711,289 RGD:1624291
inner dynein arm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnah1 dynein, axonemal, heavy chain 1 JBrowse link 16 7,345,131 7,407,009 RGD:1624291
RGD:13792537
G Dnah12 dynein, axonemal, heavy chain 12 JBrowse link 16 2,377,218 2,534,130 RGD:13792537
G Dnah7 dynein, axonemal, heavy chain 7 JBrowse link 9
9
60,070,087
59,564,253
60,330,121
59,595,347
RGD:1624291
RGD:13792537
RGD:1600115
G Dnai3 dynein axonemal intermediate chain 3 JBrowse link 2 251,912,432 251,970,699 RGD:13792537
G Dnhd1 dynein heavy chain domain 1 JBrowse link 1 170,473,792 170,570,220 RGD:13792537
neuronal ribonucleoprotein granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07027799.1 RGD:13792537
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:8553560
RGD:1624291
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:9685480
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B JBrowse link 10 34,955,713 34,961,662 RGD:9999187
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:6902916
G Kif3c kinesin family member 3C JBrowse link 6 27,768,943 27,815,611 RGD:8553560
G Pqbp1 polyglutamine binding protein 1 JBrowse link X 15,448,570 15,453,130 RGD:1624291
RGD:1600115
G RGD1561897 similar to Serine/threonine-protein kinase Kist (Kinase interacting with stathmin) JBrowse link 17 44,418,463 44,420,729 RGD:13792537
G Uhmk1 U2AF homology motif kinase 1 JBrowse link 13 88,521,625 88,536,728 RGD:1624291
RGD:13792537
outer dynein arm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link 10 90,984,213 90,987,829 RGD:1600115
G Ccdc114 coiled-coil domain containing 114 JBrowse link 1 101,904,042 101,932,999 RGD:1624291
RGD:1600115
G Cfap70 cilia and flagella associated protein 70 JBrowse link 15 4,285,049 4,350,707 RGD:1624291
G Dnah17 dynein, axonemal, heavy chain 17 JBrowse link 10 107,028,115 107,161,288 RGD:1624291
G Dnah5 dynein, axonemal, heavy chain 5 JBrowse link 2
2
80,947,730
81,159,060
81,143,997
81,337,560
RGD:1624291
G Dnah8 dynein, axonemal, heavy chain 8 JBrowse link 20 9,301,317 9,560,805 RGD:13792537
G Dnai1 dynein, axonemal, intermediate chain 1 JBrowse link 5 57,947,796 58,017,985 RGD:1624291
RGD:13792537
G Dnai2 dynein, axonemal, intermediate chain 2 JBrowse link 10 103,266,343 103,301,521 RGD:1624291
RGD:13792537
G Nme8 NME/NM23 family member 8 JBrowse link 17 47,300,932 47,368,543 RGD:1624291
RGD:1600115
outer dynein arm docking complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ttc25 tetratricopeptide repeat domain 25 JBrowse link 10 88,459,490 88,488,237 RGD:1624291
proximal portion of axoneme term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnah11 dynein, axonemal, heavy chain 11 JBrowse link 6 145,784,893 146,099,212 RGD:1624291
radial spoke term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfap206 cilia and flagella associated protein 206 JBrowse link 5 50,148,685 50,193,580 RGD:1600115
G Rsph6a radial spoke head 6 homolog A JBrowse link 1 79,959,555 79,979,217 RGD:1600115
G Rsph9 radial spoke head component 9 JBrowse link 9 17,224,589 17,245,093 RGD:1600115
radial spoke head term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rsph4a radial spoke head component 4A JBrowse link 20 32,450,701 32,467,362 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20300
    intracellular 14243
      cytoplasm 11099
        cytoplasmic region 290
          plasma membrane bounded cell projection cytoplasm 236
            ciliary plasm + 130
            neuron projection cytoplasm + 106
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.