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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian regulation of gene expression
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Accession:GO:0032922 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.
Synonyms:related_synonym: circadian regulation of protein expression;   diurnal variation of gene expression;   diurnal variation of protein expression


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circadian regulation of gene expression term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:2291861
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:1624291
RGD:1600115
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Atf4 activating transcription factor 4 JBrowse link 7 121,480,723 121,482,781 RGD:1624291
RGD:1600115
G Bhlhe40 basic helix-loop-helix family, member e40 JBrowse link 4 140,703,619 140,709,319 RGD:1624291
RGD:1600115
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 4 180,230,742 180,235,138 RGD:1624291
RGD:1600115
G Cartpt CART prepropeptide JBrowse link 2 30,125,249 30,127,408 RGD:8553315
G Cavin3 caveolae associated protein 3 JBrowse link 1 170,317,099 170,318,688 RGD:1624291
RGD:1600115
G Ciart circadian associated repressor of transcription JBrowse link 2 197,987,705 197,991,198 RGD:1624291
RGD:13792537
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:1600115
RGD:1624291
G Crem cAMP responsive element modulator JBrowse link 17 57,021,704 57,090,888 RGD:1624291
G Cry1 cryptochrome circadian regulator 1 JBrowse link 7 24,534,593 24,634,098 RGD:1600115
RGD:1624291
G Cry2 cryptochrome circadian regulator 2 JBrowse link 3 81,314,151 81,344,143 RGD:1600115
RGD:1624291
G Csnk1d casein kinase 1, delta JBrowse link 10 110,147,786 110,182,413 RGD:1600115
RGD:1624291
G Csnk1e casein kinase 1, epsilon JBrowse link 7 120,651,976 120,675,559 RGD:1624291
RGD:1600115
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1624291
RGD:1600115
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:1624291
RGD:1600115
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:1600115
RGD:1624291
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 JBrowse link 4 118,852,046 118,901,583 RGD:1600115
RGD:1624291
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:1624291
RGD:1600115
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:1624291
G Hdac3 histone deacetylase 3 JBrowse link 18 31,073,057 31,094,347 RGD:1600115
RGD:1624291
G Hnf1b HNF1 homeobox B JBrowse link 10 71,159,863 71,218,902 RGD:2312721
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1624291
G Huwe1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase JBrowse link X 21,474,627 21,603,348 RGD:1600115
RGD:1624291
G Id2 inhibitor of DNA binding 2 JBrowse link 6 44,360,077 44,361,908 RGD:1624291
RGD:1600115
G Kdm5a lysine demethylase 5A JBrowse link 4 152,892,388 152,972,196 RGD:1624291
RGD:1600115
G Kmt2a lysine methyltransferase 2A JBrowse link 8 49,110,407 49,185,872 RGD:1624291
RGD:1600115
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 JBrowse link 3 101,051,960 101,152,119 RGD:1624291
RGD:1600115
G Maged1 MAGE family member D1 JBrowse link X 63,803,194 63,809,715 RGD:1600115
RGD:1624291
G Mc3r melanocortin 3 receptor JBrowse link 3 170,252,901 170,253,998 RGD:1624291
RGD:1600115
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:1624291
RGD:1600115
G Mybbp1a MYB binding protein 1a JBrowse link 10 59,000,400 59,010,794 RGD:1624291
RGD:1600115
G Mycbp2 MYC binding protein 2, E3 ubiquitin protein ligase JBrowse link 15
15
87,405,472
93,678,062
87,450,812
93,901,556
RGD:1600115
RGD:1624291
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 6 52,122,085 52,156,473 RGD:1624291
RGD:1600115
G Ncoa2 nuclear receptor coactivator 2 JBrowse link 5 5,466,544 5,696,540 RGD:1600115
RGD:1624291
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:1624291
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:1624291
RGD:1600115
G Noct nocturnin JBrowse link 2 140,286,661 140,306,869 RGD:1624291
RGD:1600115
G Npas2 neuronal PAS domain protein 2 JBrowse link 9 45,901,262 46,081,880 RGD:1624291
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 JBrowse link 5 151,776,004 151,779,319 RGD:1600115
RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Nrip1 nuclear receptor interacting protein 1 JBrowse link 11 14,658,225 14,742,478 RGD:1624291
RGD:13792537
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:1600115
RGD:1624291
G Per1 period circadian regulator 1 JBrowse link 10 55,681,761 55,696,557 RGD:1600115
RGD:13792537
RGD:1624291
G Per2 period circadian regulator 2 JBrowse link 9 98,555,154 98,597,362 RGD:1600115
RGD:13792537
RGD:1624291
G Per3 period circadian regulator 3 JBrowse link 5 168,088,126 168,123,482 RGD:1600115
RGD:13792537
G Pml promyelocytic leukemia JBrowse link 8 63,002,515 63,034,310 RGD:1624291
RGD:1600115
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:1624291
RGD:1600115
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:1624291
RGD:1600115
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:1624291
RGD:1600115
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:1624291
RGD:13792537
RGD:1600115
G Ppp1cc protein phosphatase 1 catalytic subunit gamma JBrowse link 12 39,864,302 39,882,030 RGD:1624291
RGD:1600115
G Prkg2 protein kinase cGMP-dependent 2 JBrowse link 14 12,217,121 12,313,616 RGD:1624291
G Prmt5 protein arginine methyltransferase 5 JBrowse link 15 33,156,508 33,165,893 RGD:1624291
G Rai1 retinoic acid induced 1 JBrowse link 10 46,511,271 46,571,591 RGD:1624291
RGD:13792537
G Rbm4 RNA binding motif protein 4 JBrowse link 1 220,038,403 220,049,756 RGD:1624291
G Rbm4b RNA binding motif protein 4B JBrowse link 1 220,009,397 220,019,488 RGD:1624291
RGD:1600115
G Relb RELB proto-oncogene, NF-kB subunit JBrowse link 1 80,517,081 80,545,019 RGD:1624291
RGD:1600115
G Rora RAR-related orphan receptor A JBrowse link 8 75,515,886 75,616,477 RGD:1624291
RGD:1600115
G Rorc RAR-related orphan receptor C JBrowse link 2 195,612,471 195,636,797 RGD:1624291
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
G Top1 DNA topoisomerase I JBrowse link 3 156,635,688 156,717,686 RGD:1600115
RGD:1624291
G Usp2 ubiquitin specific peptidase 2 JBrowse link 8 48,403,985 48,432,525 RGD:1600115
RGD:1624291
G Zfhx3 zinc finger homeobox 3 JBrowse link 19 42,753,983 42,925,794 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17885
    multicellular organismal process 8509
      circadian regulation of gene expression 65
Path 2
Term Annotations click to browse term
  biological_process 17885
    biological regulation 12599
      regulation of biological process 11942
        regulation of metabolic process 6119
          regulation of macromolecule metabolic process 5639
            regulation of gene expression 3922
              circadian regulation of gene expression 65
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