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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of transcription elongation from RNA polymerase II promoter
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Accession:GO:0032968 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.
Synonyms:exact_synonym: positive regulation of RNA elongation from RNA polymerase II promoter
 related_synonym: positive regulation of gene-specific transcription elongation from RNA polymerase II promoter
 alt_id: GO:0090040


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positive regulation of transcription elongation from RNA polymerase II promoter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:1624291
G Btbd18 BTB domain containing 18 JBrowse link 3 72,060,811 72,070,566 RGD:1624291
RGD:1600115
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:9586729
G Cdc73 cell division cycle 73 JBrowse link 13 60,403,771 60,496,511 RGD:1624291
RGD:1600115
RGD:13792537
G Cdk12 cyclin-dependent kinase 12 JBrowse link 10 86,157,186 86,210,657 RGD:13792537
G Cdk9 cyclin-dependent kinase 9 JBrowse link 3 11,742,269 11,747,117 RGD:13792537
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 1 175,839,140 175,869,167 RGD:1624291
RGD:1600115
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:1624291
G Eapp E2F-associated phosphoprotein JBrowse link 6 75,561,898 75,589,274 RGD:1624291
RGD:1600115
G Ell elongation factor for RNA polymerase II JBrowse link 16 20,594,129 20,641,441 RGD:1624291
RGD:1600115
G Eloc elongin C JBrowse link 5 2,042,991 2,059,357 RGD:730008
RGD:13792537
G Gtf2f1 general transcription factor IIF subunit 1 JBrowse link 9 10,032,806 10,042,392 RGD:1600115
G Gtf2f2 general transcription factor IIF subunit 2 JBrowse link 15 57,942,057 58,068,892 RGD:9681417
RGD:13792537
G Ikzf1 IKAROS family zinc finger 1 JBrowse link 14 91,782,281 91,867,828 RGD:1624291
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component JBrowse link 8 82,380,906 82,405,293 RGD:1624291
RGD:13792537
RGD:1600115
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:2292639
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component JBrowse link 1 85,362,421 85,367,999 RGD:1624291
RGD:1600115
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) JBrowse link 3 111,478,350 111,537,941 RGD:1624291
RGD:1600115
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit JBrowse link 15 28,574,841 28,611,959 RGD:13792537
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor JBrowse link 10 65,470,470 65,507,581 RGD:1624291
RGD:13792537
G Wdr61 WD repeat domain 61 JBrowse link 8 59,296,339 59,313,663 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17941
    metabolic process 10685
      positive regulation of metabolic process 3617
        positive regulation of macromolecule metabolic process 3331
          positive regulation of gene expression 2033
            positive regulation of transcription, DNA-templated 1568
              positive regulation of DNA-templated transcription, elongation 35
                positive regulation of transcription elongation from RNA polymerase II promoter 21
                  phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter 0
                  phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter 0
Path 2
Term Annotations click to browse term
  biological_process 17941
    metabolic process 10685
      cellular metabolic process 9780
        cellular aromatic compound metabolic process 5095
          nucleobase-containing compound metabolic process 4883
            nucleic acid metabolic process 4432
              RNA metabolic process 3962
                RNA biosynthetic process 3109
                  regulation of RNA biosynthetic process 3001
                    regulation of nucleic acid-templated transcription 2996
                      positive regulation of nucleic acid-templated transcription 1625
                        positive regulation of transcription, DNA-templated 1568
                          positive regulation of transcription by RNA polymerase II 1249
                            positive regulation of transcription elongation from RNA polymerase II promoter 21
                              phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter 0
                              phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.